cyvcf2 0.30.11-1.1 source package in Ubuntu
Changelog
cyvcf2 (0.30.11-1.1) unstable; urgency=medium * Non-maintainer upload. * Patch: Python 3.10 support - avoid a regression in gzip file handles (Closes: #1000317) -- Stefano Rivera <email address hidden> Sun, 21 Nov 2021 08:38:57 -0400
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section |
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Downloads
File | Size | SHA-256 Checksum |
---|---|---|
cyvcf2_0.30.11-1.1.dsc | 1.7 KiB | c83263fe6ad481b6a415ee40fa06f6f121b3c8db2d2033b06a592a64b04ca9e7 |
cyvcf2_0.30.11.orig.tar.gz | 401.2 KiB | 5eff23ea2b67aeb19396c3071fef7bc32c3453884b49cfe390dbf533c118a05a |
cyvcf2_0.30.11-1.1.debian.tar.xz | 6.6 KiB | 77b36590b82f4b6fc214c313306b3bfb4da81211b645933080917c79eabed014 |
Available diffs
- diff from 0.30.4-4 to 0.30.11-1.1 (10.0 KiB)
- diff from 0.30.11-1 to 0.30.11-1.1 (1.1 KiB)
No changes file available.
Binary packages built by this source
- python3-cyvcf2: VCF parser based on htslib (Python 3)
This modules allows fast parsing of VCF and BCF including region-queries
with Python. This is essential for efficient analyses of nucleotide
variation with Python on high-throughput sequencing data.
.
cyvcf2 is a cython wrapper around htslib. Attributes like
variant.gt_ref_ depths return a numpy array directly so they are
immediately ready for downstream use.
.
This package installs the library for Python 3.
- python3-cyvcf2-dbgsym: debug symbols for python3-cyvcf2