crac 2.5.0+dfsg-2 source package in Ubuntu


crac (2.5.0+dfsg-2) unstable; urgency=low

  [ Steffen Moeller ]
  * debian/upstream/metadata: Added reference to registries
  * debian/copyright: Corrected upstream name to CRAC

  [ Sascha Steinbiss ]
  * Make build reproducible. Thanks to Chris Lamb for the patch.
    Closes: #859300

 -- Sascha Steinbiss <email address hidden>  Tue, 08 Aug 2017 21:16:46 +0200

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Uploaded by:
Debian Med on 2017-08-08
Uploaded to:
Original maintainer:
Debian Med
Low Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Cosmic release on 2018-05-01 universe misc
Bionic release on 2017-10-24 universe misc
Artful release on 2017-08-09 universe misc


File Size SHA-256 Checksum
crac_2.5.0+dfsg-2.dsc 1.6 KiB b093fcc21d56cda6062b2a396336a15d6fcdf771c4c8b8397f31cf44a4f827fb
crac_2.5.0+dfsg.orig.tar.xz 453.9 KiB 14ff88bcc3659b10a60737480a2387d9d72cdfe5841cafb430b4db9ab3770324
crac_2.5.0+dfsg-2.debian.tar.xz 11.9 KiB 3a4f73a646e927291149ff6aa59477991e9b014c025d4a0d761be7180273d0d6

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Binary packages built by this source

crac: integrated RNA-Seq read analysis

 CRAC is a tool to analyze High Throughput Sequencing (HTS) data in
 comparison to a reference genome. It is intended for transcriptomic
 and genomic sequencing reads. More precisely, with transcriptomic
 reads as input, it predicts point mutations, indels, splice junction,
 and chimeric RNAs (ie, non colinear splice junctions). CRAC can also
 output positions and nature of sequence error that it detects in the
 reads. CRAC uses a genome index. This index must be computed before
 running the read analysis. For this sake, use the command "crac-index"
 on your genome files. You can then process the reads using the command
 crac. See the man page of CRAC (help file) by typing "man crac". CRAC
 requires large amount of main memory on your computer. For processing
 against the Human genome, say 50 million reads of 100 nucleotide each,
 CRAC requires about 40 gigabytes of main memory. Check whether the
 system of your computing server is equipped with sufficient amount of
 memory before launching an analysis.

crac-dbgsym: Debug symbols for crac