https://launchpad.net/ubuntu/+source/comet-ms/2019015+cleaned1-3/+build/19828017 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-s390x-005 4.15.0-112-generic #113-Ubuntu SMP Thu Jul 9 23:40:36 UTC 2020 s390x Buildd toolchain package versions: launchpad-buildd_189 python-lpbuildd_189 sbuild_0.75.0-1ubuntu1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu16.04.1 bzr_2.7.0+bzr6622-10 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu18.04.1 git_1:2.17.1-1ubuntu0.7 dpkg-dev_1.19.0.5ubuntu2.3 python-debian_0.1.32. Syncing the system clock with the buildd NTP service... 14 Aug 05:12:02 ntpdate[1781]: adjust time server 10.211.37.1 offset -0.001052 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=groovy --arch=s390x PACKAGEBUILD-19828017 --image-type chroot /home/buildd/filecache-default/c742ba36b312cb05af21d0da5b96b5d4203afb06 Creating target for build PACKAGEBUILD-19828017 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=groovy --arch=s390x PACKAGEBUILD-19828017 Starting target for build PACKAGEBUILD-19828017 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=groovy --arch=s390x PACKAGEBUILD-19828017 'deb http://ftpmaster.internal/ubuntu groovy main universe' 'deb http://ftpmaster.internal/ubuntu groovy-security main universe' 'deb http://ftpmaster.internal/ubuntu groovy-updates main universe' 'deb http://ftpmaster.internal/ubuntu groovy-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-19828017 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=groovy --arch=s390x PACKAGEBUILD-19828017 Updating target for build PACKAGEBUILD-19828017 Get:1 http://ftpmaster.internal/ubuntu groovy InRelease [267 kB] Get:2 http://ftpmaster.internal/ubuntu groovy-security InRelease [89.1 kB] Get:3 http://ftpmaster.internal/ubuntu groovy-updates InRelease [89.1 kB] Get:4 http://ftpmaster.internal/ubuntu groovy-proposed InRelease [118 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main s390x Packages [926 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main Translation-en [510 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/universe s390x Packages [8428 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/universe Translation-en [5254 kB] Get:9 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x Packages [97.6 kB] Get:10 http://ftpmaster.internal/ubuntu groovy-proposed/main Translation-en [50.3 kB] Get:11 http://ftpmaster.internal/ubuntu groovy-proposed/universe s390x Packages [467 kB] Get:12 http://ftpmaster.internal/ubuntu groovy-proposed/universe Translation-en [307 kB] Fetched 16.6 MB in 3s (5022 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following package was automatically installed and is no longer required: libjson-c4 Use 'sudo apt autoremove' to remove it. The following NEW packages will be installed: libjson-c5 The following packages will be upgraded: apt base-files binutils binutils-common binutils-s390x-linux-gnu bsdutils build-essential ca-certificates coreutils cpp-10 dpkg dpkg-dev g++-10 gcc-10 gcc-10-base libapt-pkg6.0 libasan6 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libcap2 libcc1-0 libcryptsetup12 libctf-nobfd0 libctf0 libdpkg-perl libgcc-10-dev libgcc-s1 libgdbm-compat4 libgdbm6 libgmp10 libgomp1 libitm1 liblzma5 libmount1 libmpc3 libmpfr6 libpam-modules libpam-modules-bin libpam-runtime libpam0g libselinux1 libsemanage-common libsemanage1 libsmartcols1 libstdc++-10-dev libstdc++6 libsystemd0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev mount sensible-utils systemd systemd-sysv systemd-timesyncd util-linux xz-utils 62 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 52.0 MB of archives. After this operation, 7939 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu groovy/main s390x base-files s390x 11ubuntu11 [60.2 kB] Get:2 http://ftpmaster.internal/ubuntu groovy/main s390x bsdutils s390x 1:2.36-2ubuntu1 [85.7 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main s390x libselinux1 s390x 3.1-2 [65.7 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main s390x coreutils s390x 8.32-3ubuntu1 [1460 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main s390x dpkg s390x 1.20.5ubuntu1 [1177 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main s390x util-linux s390x 2.36-2ubuntu1 [1068 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main s390x libcc1-0 s390x 10.2.0-5ubuntu2 [39.4 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main s390x gcc-10-base s390x 10.2.0-5ubuntu2 [19.7 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main s390x libgcc-s1 s390x 10.2.0-5ubuntu2 [30.3 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main s390x libgomp1 s390x 10.2.0-5ubuntu2 [115 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main s390x libitm1 s390x 10.2.0-5ubuntu2 [28.6 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main s390x libatomic1 s390x 10.2.0-5ubuntu2 [8384 B] Get:13 http://ftpmaster.internal/ubuntu groovy/main s390x libasan6 s390x 10.2.0-5ubuntu2 [351 kB] Get:14 http://ftpmaster.internal/ubuntu groovy/main s390x libubsan1 s390x 10.2.0-5ubuntu2 [156 kB] Get:15 http://ftpmaster.internal/ubuntu groovy/main s390x g++-10 s390x 10.2.0-5ubuntu2 [8389 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main s390x libstdc++-10-dev s390x 10.2.0-5ubuntu2 [1730 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main s390x libgcc-10-dev s390x 10.2.0-5ubuntu2 [779 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main s390x gcc-10 s390x 10.2.0-5ubuntu2 [14.8 MB] Get:19 http://ftpmaster.internal/ubuntu groovy/main s390x cpp-10 s390x 10.2.0-5ubuntu2 [7289 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main s390x libstdc++6 s390x 10.2.0-5ubuntu2 [518 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main s390x libgmp10 s390x 2:6.2.0+dfsg-6ubuntu1 [252 kB] Get:22 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libmpfr6 s390x 4.1.0-3 [254 kB] Get:23 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libmpc3 s390x 1.2.0~rc1-1 [43.4 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main s390x libzstd1 s390x 1.4.5+dfsg-4 [335 kB] Get:25 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libctf-nobfd0 s390x 2.35-2ubuntu1 [50.0 kB] Get:26 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libctf0 s390x 2.35-2ubuntu1 [49.5 kB] Get:27 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libbinutils s390x 2.35-2ubuntu1 [337 kB] Get:28 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x binutils-common s390x 2.35-2ubuntu1 [211 kB] Get:29 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x binutils s390x 2.35-2ubuntu1 [3344 B] Get:30 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x binutils-s390x-linux-gnu s390x 2.35-2ubuntu1 [1690 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main s390x liblzma5 s390x 5.2.4-1ubuntu1 [90.5 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main s390x systemd-sysv s390x 246-2ubuntu1 [10.3 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main s390x systemd-timesyncd s390x 246-2ubuntu1 [27.1 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main s390x libaudit-common all 1:2.8.5-3ubuntu1 [4076 B] Get:35 http://ftpmaster.internal/ubuntu groovy/main s390x libaudit1 s390x 1:2.8.5-3ubuntu1 [38.1 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main s390x libcap2 s390x 1:2.42-2 [18.8 kB] Get:37 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libjson-c5 s390x 0.15-1 [33.0 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/main s390x libblkid1 s390x 2.36-2ubuntu1 [130 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/main s390x libuuid1 s390x 2.36-2ubuntu1 [21.7 kB] Get:40 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libcryptsetup12 s390x 2:2.3.3-1ubuntu4 [183 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/main s390x libmount1 s390x 2.36-2ubuntu1 [143 kB] Get:42 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libpam0g s390x 1.3.1-5ubuntu6 [54.9 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/main s390x mount s390x 2.36-2ubuntu1 [119 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main s390x systemd s390x 246-2ubuntu1 [4283 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main s390x libsystemd0 s390x 246-2ubuntu1 [293 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/main s390x libudev1 s390x 246-2ubuntu1 [73.1 kB] Get:47 http://ftpmaster.internal/ubuntu groovy/main s390x libapt-pkg6.0 s390x 2.1.10 [847 kB] Get:48 http://ftpmaster.internal/ubuntu groovy/main s390x apt s390x 2.1.10 [1285 kB] Get:49 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libpam-modules-bin s390x 1.3.1-5ubuntu6 [43.4 kB] Get:50 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libpam-modules s390x 1.3.1-5ubuntu6 [250 kB] Get:51 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libpam-runtime all 1.3.1-5ubuntu6 [37.3 kB] Get:52 http://ftpmaster.internal/ubuntu groovy/main s390x libsemanage-common all 3.1-1 [10.2 kB] Get:53 http://ftpmaster.internal/ubuntu groovy/main s390x libsemanage1 s390x 3.1-1 [80.7 kB] Get:54 http://ftpmaster.internal/ubuntu groovy/main s390x libsmartcols1 s390x 2.36-2ubuntu1 [95.8 kB] Get:55 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x sensible-utils all 0.0.13 [15.1 kB] Get:56 http://ftpmaster.internal/ubuntu groovy/main s390x ca-certificates all 20200601 [147 kB] Get:57 http://ftpmaster.internal/ubuntu groovy/main s390x xz-utils s390x 5.2.4-1ubuntu1 [80.5 kB] Get:58 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libgdbm6 s390x 1.18.1-5ubuntu1 [27.9 kB] Get:59 http://ftpmaster.internal/ubuntu groovy/main s390x dpkg-dev all 1.20.5ubuntu1 [758 kB] Get:60 http://ftpmaster.internal/ubuntu groovy/main s390x libdpkg-perl all 1.20.5ubuntu1 [231 kB] Get:61 http://ftpmaster.internal/ubuntu groovy/main s390x build-essential s390x 12.8ubuntu3 [4636 B] Get:62 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libgdbm-compat4 s390x 1.18.1-5ubuntu1 [6336 B] Get:63 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x linux-libc-dev s390x 5.8.0-16.17 [1115 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 52.0 MB in 5s (9861 kB/s) (Reading database ... 12573 files and directories currently installed.) Preparing to unpack .../base-files_11ubuntu11_s390x.deb ... Unpacking base-files (11ubuntu11) over (11ubuntu9) ... Setting up base-files (11ubuntu11) ... Installing new version of config file /etc/update-motd.d/50-motd-news ... Removing obsolete conffile /etc/default/motd-news ... (Reading database ... 12572 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.36-2ubuntu1_s390x.deb ... Unpacking bsdutils (1:2.36-2ubuntu1) over (1:2.35.2-7ubuntu3) ... Setting up bsdutils (1:2.36-2ubuntu1) ... (Reading database ... 12572 files and directories currently installed.) Preparing to unpack .../libselinux1_3.1-2_s390x.deb ... Unpacking libselinux1:s390x (3.1-2) over (3.0-1build2) ... Setting up libselinux1:s390x (3.1-2) ... (Reading database ... 12572 files and directories currently installed.) Preparing to unpack .../coreutils_8.32-3ubuntu1_s390x.deb ... Unpacking coreutils (8.32-3ubuntu1) over (8.30-3ubuntu3) ... Setting up coreutils (8.32-3ubuntu1) ... 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Unpacking libgdbm-compat4:s390x (1.18.1-5ubuntu1) over (1.18.1-5) ... Preparing to unpack .../8-linux-libc-dev_5.8.0-16.17_s390x.deb ... Unpacking linux-libc-dev:s390x (5.8.0-16.17) over (5.4.0-42.46) ... Setting up binutils-common:s390x (2.35-2ubuntu1) ... Setting up linux-libc-dev:s390x (5.8.0-16.17) ... Setting up libctf-nobfd0:s390x (2.35-2ubuntu1) ... Setting up libgomp1:s390x (10.2.0-5ubuntu2) ... Setting up libcap2:s390x (1:2.42-2) ... Setting up libasan6:s390x (10.2.0-5ubuntu2) ... Setting up ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 13 added, 14 removed; done. Setting up libmpfr6:s390x (4.1.0-3) ... Setting up xz-utils (5.2.4-1ubuntu1) ... Setting up libmpc3:s390x (1.2.0~rc1-1) ... Setting up libatomic1:s390x (10.2.0-5ubuntu2) ... Setting up libdpkg-perl (1.20.5ubuntu1) ... Setting up libubsan1:s390x (10.2.0-5ubuntu2) ... Setting up mount (2.36-2ubuntu1) ... Setting up sensible-utils (0.0.13) ... Setting up libbinutils:s390x (2.35-2ubuntu1) ... Setting up libjson-c5:s390x (0.15-1) ... Setting up libcc1-0:s390x (10.2.0-5ubuntu2) ... Setting up cpp-10 (10.2.0-5ubuntu2) ... Setting up libitm1:s390x (10.2.0-5ubuntu2) ... Setting up libgdbm6:s390x (1.18.1-5ubuntu1) ... Setting up libctf0:s390x (2.35-2ubuntu1) ... Setting up binutils-s390x-linux-gnu (2.35-2ubuntu1) ... Setting up libgcc-10-dev:s390x (10.2.0-5ubuntu2) ... Setting up binutils (2.35-2ubuntu1) ... Setting up dpkg-dev (1.20.5ubuntu1) ... Setting up libgdbm-compat4:s390x (1.18.1-5ubuntu1) ... Setting up gcc-10 (10.2.0-5ubuntu2) ... Setting up build-essential (12.8ubuntu3) ... Setting up libcryptsetup12:s390x (2:2.3.3-1ubuntu4) ... Setting up libstdc++-10-dev:s390x (10.2.0-5ubuntu2) ... Setting up g++-10 (10.2.0-5ubuntu2) ... Setting up systemd (246-2ubuntu1) ... Installing new version of config file /etc/systemd/logind.conf ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/resolved.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from random generator. Removing obsolete conffile /etc/dhcp/dhclient-enter-hooks.d/resolved ... Setting up systemd-timesyncd (246-2ubuntu1) ... Setting up systemd-sysv (246-2ubuntu1) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... Processing triggers for ca-certificates (20200601) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-19828017 s390x groovy-proposed -c chroot:build-PACKAGEBUILD-19828017 --arch=s390x --dist=groovy-proposed --nolog comet-ms_2019015+cleaned1-3.dsc Initiating build PACKAGEBUILD-19828017 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.15.0-112-generic #113-Ubuntu SMP Thu Jul 9 23:40:36 UTC 2020 s390x sbuild (Debian sbuild) 0.75.0 (21 Mar 2018) on bos02-s390x-005.buildd +==============================================================================+ | comet-ms 2019015+cleaned1-3 (s390x) Fri, 14 Aug 2020 05:12:24 +0000 | +==============================================================================+ Package: comet-ms Version: 2019015+cleaned1-3 Source Version: 2019015+cleaned1-3 Distribution: groovy-proposed Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-19828017/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- comet-ms_2019015+cleaned1-3.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/comet-ms-YRWue7/comet-ms-2019015+cleaned1' with '<>' I: NOTICE: Log filtering will replace 'build/comet-ms-YRWue7' with '<>' +------------------------------------------------------------------------------+ | Install build-essential | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-YOSLSj/apt_archive/sbuild-build-depends-core-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 1 entries to output Packages file. Ign:1 copy:/<>/resolver-YOSLSj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-YOSLSj/apt_archive ./ Release [957 B] Ign:3 copy:/<>/resolver-YOSLSj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-YOSLSj/apt_archive ./ Sources [349 B] Get:5 copy:/<>/resolver-YOSLSj/apt_archive ./ Packages [433 B] Fetched 1739 B in 0s (0 B/s) Reading package lists... Reading package lists... Install core build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libjson-c4 Use 'apt autoremove' to remove it. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-YOSLSj/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 12694 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any) +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), libmstoolkit-dev (>= 82), libmstoolkit-dev (<< 83), docbook-to-man Filtered Build-Depends: debhelper-compat (= 12), dpkg-dev (>= 1.16.1~), libmstoolkit-dev (>= 82), libmstoolkit-dev (<< 83), docbook-to-man dpkg-deb: building package 'sbuild-build-depends-comet-ms-dummy' in '/<>/resolver-YOSLSj/apt_archive/sbuild-build-depends-comet-ms-dummy.deb'. dpkg-scanpackages: warning: Packages in archive but missing from override file: dpkg-scanpackages: warning: sbuild-build-depends-comet-ms-dummy sbuild-build-depends-core-dummy dpkg-scanpackages: info: Wrote 2 entries to output Packages file. Ign:1 copy:/<>/resolver-YOSLSj/apt_archive ./ InRelease Get:2 copy:/<>/resolver-YOSLSj/apt_archive ./ Release [963 B] Ign:3 copy:/<>/resolver-YOSLSj/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-YOSLSj/apt_archive ./ Sources [537 B] Get:5 copy:/<>/resolver-YOSLSj/apt_archive ./ Packages [617 B] Fetched 2117 B in 0s (0 B/s) Reading package lists... Reading package lists... Install comet-ms build dependencies (apt-based resolver) -------------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following package was automatically installed and is no longer required: libjson-c4 Use 'apt autoremove' to remove it. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism docbook docbook-to-man dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libmstoolkit-dev libmstoolkit82 libosp5 libpipeline1 libsigsegv2 libsqlite3-dev libsub-override-perl libtool libuchardet0 libxml2 m4 man-db opensp po-debconf sgml-base sgml-data xml-core zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc dh-make docbook-defguide docbook-dsssl docbook-xml psgml gettext-doc libasprintf-dev libgettextpo-dev groff sqlite3-doc libtool-doc gfortran | fortran95-compiler gcj-jdk m4-doc apparmor less www-browser doc-base libmail-box-perl sgml-base-doc perlsgml w3-recs libxml2-utils Recommended packages: curl | wget | lynx libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libltdl-dev libmail-sendmail-perl The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdextrautils debhelper dh-autoreconf dh-strip-nondeterminism docbook docbook-to-man dwz file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libcroco3 libdebhelper-perl libelf1 libexpat1 libexpat1-dev libfile-stripnondeterminism-perl libglib2.0-0 libicu67 libmagic-mgc libmagic1 libmstoolkit-dev libmstoolkit82 libosp5 libpipeline1 libsigsegv2 libsqlite3-dev libsub-override-perl libtool libuchardet0 libxml2 m4 man-db opensp po-debconf sbuild-build-depends-comet-ms-dummy sgml-base sgml-data xml-core zlib1g-dev 0 upgraded, 46 newly installed, 0 to remove and 0 not upgraded. Need to get 19.4 MB of archives. After this operation, 83.3 MB of additional disk space will be used. Get:1 copy:/<>/resolver-YOSLSj/apt_archive ./ sbuild-build-depends-comet-ms-dummy 0.invalid.0 [908 B] Get:2 http://ftpmaster.internal/ubuntu groovy/main s390x bsdextrautils s390x 2.36-2ubuntu1 [77.4 kB] Get:3 http://ftpmaster.internal/ubuntu groovy/main s390x libuchardet0 s390x 0.0.7-1 [67.5 kB] Get:4 http://ftpmaster.internal/ubuntu groovy/main s390x groff-base s390x 1.22.4-5 [812 kB] Get:5 http://ftpmaster.internal/ubuntu groovy/main s390x libpipeline1 s390x 1.5.3-1 [28.7 kB] Get:6 http://ftpmaster.internal/ubuntu groovy/main s390x man-db s390x 2.9.3-2 [1106 kB] Get:7 http://ftpmaster.internal/ubuntu groovy/main s390x sgml-base all 1.30 [12.5 kB] Get:8 http://ftpmaster.internal/ubuntu groovy/main s390x libmagic-mgc s390x 1:5.38-5 [219 kB] Get:9 http://ftpmaster.internal/ubuntu groovy/main s390x libmagic1 s390x 1:5.38-5 [72.9 kB] Get:10 http://ftpmaster.internal/ubuntu groovy/main s390x file s390x 1:5.38-5 [23.1 kB] Get:11 http://ftpmaster.internal/ubuntu groovy/main s390x libelf1 s390x 0.180-1 [48.1 kB] Get:12 http://ftpmaster.internal/ubuntu groovy/main s390x libexpat1 s390x 2.2.9-1build1 [69.8 kB] Get:13 http://ftpmaster.internal/ubuntu groovy/main s390x libglib2.0-0 s390x 2.64.4-1 [1181 kB] Get:14 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libicu67 s390x 67.1-3ubuntu1 [8470 kB] Get:15 http://ftpmaster.internal/ubuntu groovy-proposed/main s390x libxml2 s390x 2.9.10+dfsg-5build1 [645 kB] Get:16 http://ftpmaster.internal/ubuntu groovy/main s390x gettext-base s390x 0.19.8.1-10build1 [49.0 kB] Get:17 http://ftpmaster.internal/ubuntu groovy/main s390x libsigsegv2 s390x 2.12-2build1 [13.7 kB] Get:18 http://ftpmaster.internal/ubuntu groovy/main s390x m4 s390x 1.4.18-4 [196 kB] Get:19 http://ftpmaster.internal/ubuntu groovy/main s390x autoconf all 2.69-11.1 [321 kB] Get:20 http://ftpmaster.internal/ubuntu groovy/main s390x autotools-dev all 20180224.1 [39.6 kB] Get:21 http://ftpmaster.internal/ubuntu groovy/main s390x automake all 1:1.16.2-3ubuntu2 [548 kB] Get:22 http://ftpmaster.internal/ubuntu groovy/main s390x autopoint all 0.19.8.1-10build1 [412 kB] Get:23 http://ftpmaster.internal/ubuntu groovy/main s390x libtool all 2.4.6-14 [161 kB] Get:24 http://ftpmaster.internal/ubuntu groovy/main s390x dh-autoreconf all 19 [16.1 kB] Get:25 http://ftpmaster.internal/ubuntu groovy/main s390x libdebhelper-perl all 13.2ubuntu1 [64.2 kB] Get:26 http://ftpmaster.internal/ubuntu groovy/main s390x libarchive-zip-perl all 1.68-1 [90.2 kB] Get:27 http://ftpmaster.internal/ubuntu groovy/main s390x libsub-override-perl all 0.09-2 [9532 B] Get:28 http://ftpmaster.internal/ubuntu groovy/main s390x libfile-stripnondeterminism-perl all 1.9.0-1 [17.2 kB] Get:29 http://ftpmaster.internal/ubuntu groovy/main s390x dh-strip-nondeterminism all 1.9.0-1 [5192 B] Get:30 http://ftpmaster.internal/ubuntu groovy/main s390x dwz s390x 0.13-5 [146 kB] Get:31 http://ftpmaster.internal/ubuntu groovy/main s390x libcroco3 s390x 0.6.13-1 [73.7 kB] Get:32 http://ftpmaster.internal/ubuntu groovy/main s390x gettext s390x 0.19.8.1-10build1 [867 kB] Get:33 http://ftpmaster.internal/ubuntu groovy/main s390x intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:34 http://ftpmaster.internal/ubuntu groovy/main s390x po-debconf all 1.0.21 [233 kB] Get:35 http://ftpmaster.internal/ubuntu groovy/main s390x debhelper all 13.2ubuntu1 [878 kB] Get:36 http://ftpmaster.internal/ubuntu groovy/main s390x xml-core all 0.18+nmu1 [21.6 kB] Get:37 http://ftpmaster.internal/ubuntu groovy/main s390x sgml-data all 2.0.11 [171 kB] Get:38 http://ftpmaster.internal/ubuntu groovy/universe s390x docbook all 4.5-6 [122 kB] Get:39 http://ftpmaster.internal/ubuntu groovy/universe s390x libosp5 s390x 1.5.2-13ubuntu3 [611 kB] Get:40 http://ftpmaster.internal/ubuntu groovy/universe s390x opensp s390x 1.5.2-13ubuntu3 [137 kB] Get:41 http://ftpmaster.internal/ubuntu groovy/universe s390x docbook-to-man s390x 1:2.0.0-42 [71.0 kB] Get:42 http://ftpmaster.internal/ubuntu groovy/main s390x libexpat1-dev s390x 2.2.9-1build1 [112 kB] Get:43 http://ftpmaster.internal/ubuntu groovy/universe s390x libmstoolkit82 s390x 82-7 [133 kB] Get:44 http://ftpmaster.internal/ubuntu groovy/main s390x zlib1g-dev s390x 1:1.2.11.dfsg-2ubuntu1 [166 kB] Get:45 http://ftpmaster.internal/ubuntu groovy/main s390x libsqlite3-dev s390x 3.32.3-1 [666 kB] Get:46 http://ftpmaster.internal/ubuntu groovy/universe s390x libmstoolkit-dev s390x 82-7 [144 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 19.4 MB in 1s (15.7 MB/s) Selecting previously unselected package bsdextrautils. (Reading database ... 12694 files and directories currently installed.) Preparing to unpack .../00-bsdextrautils_2.36-2ubuntu1_s390x.deb ... Unpacking bsdextrautils (2.36-2ubuntu1) ... Selecting previously unselected package libuchardet0:s390x. Preparing to unpack .../01-libuchardet0_0.0.7-1_s390x.deb ... Unpacking libuchardet0:s390x (0.0.7-1) ... Selecting previously unselected package groff-base. Preparing to unpack .../02-groff-base_1.22.4-5_s390x.deb ... Unpacking groff-base (1.22.4-5) ... Selecting previously unselected package libpipeline1:s390x. Preparing to unpack .../03-libpipeline1_1.5.3-1_s390x.deb ... Unpacking libpipeline1:s390x (1.5.3-1) ... Selecting previously unselected package man-db. Preparing to unpack .../04-man-db_2.9.3-2_s390x.deb ... Unpacking man-db (2.9.3-2) ... Selecting previously unselected package sgml-base. Preparing to unpack .../05-sgml-base_1.30_all.deb ... Unpacking sgml-base (1.30) ... Selecting previously unselected package libmagic-mgc. 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Setting up libmagic-mgc (1:5.38-5) ... Setting up libarchive-zip-perl (1.68-1) ... Setting up libglib2.0-0:s390x (2.64.4-1) ... No schema files found: doing nothing. Setting up libdebhelper-perl (13.2ubuntu1) ... Setting up libmagic1:s390x (1:5.38-5) ... Setting up gettext-base (0.19.8.1-10build1) ... Setting up file (1:5.38-5) ... Setting up libosp5 (1.5.2-13ubuntu3) ... Setting up autotools-dev (20180224.1) ... Setting up libexpat1-dev:s390x (2.2.9-1build1) ... Setting up libsqlite3-dev:s390x (3.32.3-1) ... Setting up libsigsegv2:s390x (2.12-2build1) ... Setting up autopoint (0.19.8.1-10build1) ... Setting up zlib1g-dev:s390x (1:1.2.11.dfsg-2ubuntu1) ... Setting up libuchardet0:s390x (0.0.7-1) ... Setting up libsub-override-perl (0.09-2) ... Setting up sgml-base (1.30) ... Setting up libelf1:s390x (0.180-1) ... Setting up libxml2:s390x (2.9.10+dfsg-5build1) ... Setting up libmstoolkit82 (82-7) ... Setting up libfile-stripnondeterminism-perl (1.9.0-1) ... Setting up libtool (2.4.6-14) ... Setting up m4 (1.4.18-4) ... Setting up opensp (1.5.2-13ubuntu3) ... Setting up libcroco3:s390x (0.6.13-1) ... Setting up autoconf (2.69-11.1) ... Setting up dh-strip-nondeterminism (1.9.0-1) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-5) ... Setting up xml-core (0.18+nmu1) ... Setting up libmstoolkit-dev (82-7) ... Setting up automake (1:1.16.2-3ubuntu2) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up gettext (0.19.8.1-10build1) ... Setting up man-db (2.9.3-2) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up intltool-debian (0.35.0+20060710.5) ... Setting up po-debconf (1.0.21) ... Setting up debhelper (13.2ubuntu1) ... Setting up dh-autoreconf (19) ... Processing triggers for libc-bin (2.31-0ubuntu10) ... Processing triggers for sgml-base (1.30) ... Setting up sgml-data (2.0.11) ... Processing triggers for sgml-base (1.30) ... Setting up docbook (4.5-6) ... Processing triggers for sgml-base (1.30) ... Setting up docbook-to-man (1:2.0.0-42) ... Setting up sbuild-build-depends-comet-ms-dummy (0.invalid.0) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.15.0-112-generic s390x (s390x) Toolchain package versions: binutils_2.35-2ubuntu1 dpkg-dev_1.20.5ubuntu1 g++-10_10.2.0-5ubuntu2 gcc-10_10.2.0-5ubuntu2 libc6-dev_2.31-0ubuntu10 libstdc++-10-dev_10.2.0-5ubuntu2 libstdc++6_10.2.0-5ubuntu2 linux-libc-dev_5.8.0-16.17 Package versions: adduser_3.118ubuntu2 advancecomp_2.1-2.1build1 apt_2.1.10 autoconf_2.69-11.1 automake_1:1.16.2-3ubuntu2 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu11 base-passwd_3.5.47 bash_5.0-6ubuntu2 binutils_2.35-2ubuntu1 binutils-common_2.35-2ubuntu1 binutils-s390x-linux-gnu_2.35-2ubuntu1 bsdextrautils_2.36-2ubuntu1 bsdutils_1:2.36-2ubuntu1 build-essential_12.8ubuntu3 bzip2_1.0.8-4ubuntu2 ca-certificates_20200601 coreutils_8.32-3ubuntu1 cpp_4:10.1.0-1ubuntu1 cpp-10_10.2.0-5ubuntu2 dash_0.5.10.2-7 debconf_1.5.74 debhelper_13.2ubuntu1 debianutils_4.11 dh-autoreconf_19 dh-strip-nondeterminism_1.9.0-1 diffutils_1:3.7-3build1 docbook_4.5-6 docbook-to-man_1:2.0.0-42 dpkg_1.20.5ubuntu1 dpkg-dev_1.20.5ubuntu1 dwz_0.13-5 e2fsprogs_1.45.6-1ubuntu1 fakeroot_1.24-1 file_1:5.38-5 findutils_4.7.0-1ubuntu1 g++_4:10.1.0-1ubuntu1 g++-10_10.2.0-5ubuntu2 gcc_4:10.1.0-1ubuntu1 gcc-10_10.2.0-5ubuntu2 gcc-10-base_10.2.0-5ubuntu2 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.20-1ubuntu1 gpg-agent_2.2.20-1ubuntu1 gpgconf_2.2.20-1ubuntu1 gpgv_2.2.20-1ubuntu1 grep_3.4-1 groff-base_1.22.4-5 gzip_1.10-2ubuntu1 hostname_3.23 init_1.58 init-system-helpers_1.58 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-8 libapparmor1_2.13.3-7ubuntu6 libapt-pkg6.0_2.1.10 libarchive-zip-perl_1.68-1 libargon2-1_0~20171227-0.2build20.10.0 libasan6_10.2.0-5ubuntu2 libassuan0_2.5.3-7.1 libatomic1_10.2.0-5ubuntu2 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-3ubuntu1 libaudit1_1:2.8.5-3ubuntu1 libbinutils_2.35-2ubuntu1 libblkid1_2.36-2ubuntu1 libbz2-1.0_1.0.8-4ubuntu2 libc-bin_2.31-0ubuntu10 libc-dev-bin_2.31-0ubuntu10 libc6_2.31-0ubuntu10 libc6-dev_2.31-0ubuntu10 libcap-ng0_0.7.9-2.2 libcap2_1:2.42-2 libcc1-0_10.2.0-5ubuntu2 libcom-err2_1.45.6-1ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.16-1ubuntu1 libcrypt1_1:4.4.16-1ubuntu1 libcryptsetup12_2:2.3.3-1ubuntu4 libctf-nobfd0_2.35-2ubuntu1 libctf0_2.35-2ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdebconfclient0_0.252ubuntu1 libdebhelper-perl_13.2ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu3 libdpkg-perl_1.20.5ubuntu1 libelf1_0.180-1 libexpat1_2.2.9-1build1 libexpat1-dev_2.2.9-1build1 libext2fs2_1.45.6-1ubuntu1 libfakeroot_1.24-1 libffi7_3.3-4 libfile-stripnondeterminism-perl_1.9.0-1 libgcc-10-dev_10.2.0-5ubuntu2 libgcc-s1_10.2.0-5ubuntu2 libgcrypt20_1.8.5-5ubuntu2 libgdbm-compat4_1.18.1-5ubuntu1 libgdbm6_1.18.1-5ubuntu1 libglib2.0-0_2.64.4-1 libgmp10_2:6.2.0+dfsg-6ubuntu1 libgnutls30_3.6.13-4ubuntu4 libgomp1_10.2.0-5ubuntu2 libgpg-error0_1.38-2 libhogweed6_3.6-2 libicu67_67.1-3ubuntu1 libidn2-0_2.3.0-1 libip4tc2_1.8.4-3ubuntu2 libisl22_0.22.1-1 libitm1_10.2.0-5ubuntu2 libjson-c4_0.13.1+dfsg-9 libjson-c5_0.15-1 libkmod2_27+20200310-2ubuntu1 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblz4-1_1.9.2-2 liblzma5_5.2.4-1ubuntu1 libmagic-mgc_1:5.38-5 libmagic1_1:5.38-5 libmount1_2.36-2ubuntu1 libmpc3_1.2.0~rc1-1 libmpfr6_4.1.0-3 libmstoolkit-dev_82-7 libmstoolkit82_82-7 libncurses6_6.2-1 libncursesw6_6.2-1 libnettle8_3.6-2 libnpth0_1.6-2 libosp5_1.5.2-13ubuntu3 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu6 libpam-modules-bin_1.3.1-5ubuntu6 libpam-runtime_1.3.1-5ubuntu6 libpam0g_1.3.1-5ubuntu6 libpcre2-8-0_10.34-7 libpcre3_2:8.39-13 libperl5.30_5.30.3-4 libpipeline1_1.5.3-1 libpng16-16_1.6.37-2 libprocps8_2:3.3.16-5ubuntu1 libreadline8_8.0-4 libseccomp2_2.4.3-1ubuntu4 libselinux1_3.1-2 libsemanage-common_3.1-1 libsemanage1_3.1-1 libsepol1_3.1-1 libsigsegv2_2.12-2build1 libsmartcols1_2.36-2ubuntu1 libsqlite3-0_3.32.3-1 libsqlite3-dev_3.32.3-1 libss2_1.45.6-1ubuntu1 libssl1.1_1.1.1f-1ubuntu3 libstdc++-10-dev_10.2.0-5ubuntu2 libstdc++6_10.2.0-5ubuntu2 libsub-override-perl_0.09-2 libsystemd0_246-2ubuntu1 libtasn1-6_4.16.0-2 libtinfo6_6.2-1 libtool_2.4.6-14 libubsan1_10.2.0-5ubuntu2 libuchardet0_0.0.7-1 libudev1_246-2ubuntu1 libunistring2_0.9.10-4 libuuid1_2.36-2ubuntu1 libxml2_2.9.10+dfsg-5build1 libzstd1_1.4.5+dfsg-4 linux-libc-dev_5.8.0-16.17 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu6 logsave_1.45.6-1ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.3-4ubuntu1 man-db_2.9.3-2 mawk_1.3.4.20200120-2 mount_2.36-2ubuntu1 ncurses-base_6.2-1 ncurses-bin_6.2-1 opensp_1.5.2-13ubuntu3 openssl_1.1.1f-1ubuntu3 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu6 patch_2.7.6-6 perl_5.30.3-4 perl-base_5.30.3-4 perl-modules-5.30_5.30.3-4 pinentry-curses_1.1.0-4build1 pkgbinarymangler_146 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-5ubuntu1 readline-common_8.0-4 sbuild-build-depends-comet-ms-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1build1 sensible-utils_0.0.13 sgml-base_1.30 sgml-data_2.0.11 systemd_246-2ubuntu1 systemd-sysv_246-2ubuntu1 systemd-timesyncd_246-2ubuntu1 sysvinit-utils_2.96-3ubuntu1 tar_1.30+dfsg-7 tzdata_2020a-0ubuntu1 ubuntu-keyring_2020.06.17.1 util-linux_2.36-2ubuntu1 xml-core_0.18+nmu1 xz-utils_5.2.4-1ubuntu1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Thu Aug 13 21:52:56 2020 UTC gpgv: using RSA key B053304E17D6D419DD9B465141AB484D7694CF42 gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./comet-ms_2019015+cleaned1-3.dsc dpkg-source: info: extracting comet-ms in /<>/comet-ms-2019015+cleaned1 dpkg-source: info: unpacking comet-ms_2019015+cleaned1.orig.tar.gz dpkg-source: info: unpacking comet-ms_2019015+cleaned1-3.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying makefile-to-handle-lib-debian-way-of-doing-things.patch dpkg-source: info: applying cometsearch-makefile-to-handle-lib-debian-way-of-doing-things.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-19828017 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-19828017 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-19828017 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package comet-ms dpkg-buildpackage: info: source version 2019015+cleaned1-3 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build . dpkg-buildpackage: info: host architecture s390x fakeroot debian/rules clean dh clean debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/comet-ms-2019015+cleaned1' rm -f debian/comet-ms.1 make[1]: Leaving directory '/<>/comet-ms-2019015+cleaned1' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/comet-ms.substvars debian/files rm -fr -- debian/comet-ms/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build-arch dh build-arch dh_update_autotools_config -a dh_autoreconf -a dh_auto_configure -a debian/rules override_dh_auto_build make[1]: Entering directory '/<>/comet-ms-2019015+cleaned1' docbook-to-man debian/comet-ms.sgml > debian/comet-ms.1 dh_auto_build make -j4 "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/comet-ms-2019015+cleaned1' cd CometSearch ; make make[3]: Entering directory '/<>/comet-ms-2019015+cleaned1/CometSearch' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit Threading.cpp -c g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometInterfaces.cpp -c g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometSearch.cpp -c In file included from CometSearch.cpp:19: ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = SearchThreadData*]’: ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = SearchThreadData*; ThreadPool::ThreadProc = void (*)(SearchThreadData*)]’ CometSearch.cpp:138:66: required from here ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp: In static member function ‘static bool CometSearch::RunSearch(int, int, int, int)’: CometSearch.cpp:312:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 312 | fgets(szPeffLine, iLenSzLine, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:329:30: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 329 | fgets(szPeffLine+(int)strlen(szPeffLine), iLenSzLine - (int)strlen(szPeffLine), fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:673:18: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 673 | fgets(szBuf, sizeof(szBuf), fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp: In member function ‘void CometSearch::ReadOBO(char*, std::vector*)’: CometSearch.cpp:725:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 725 | fgets(szLineOBO, SIZE_BUF, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:777:18: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 777 | fgets(szLineOBO, SIZE_BUF, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp: In member function ‘bool CometSearch::IndexSearch()’: CometSearch.cpp:1159:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1159 | fread(&lEndOfStruct, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1166:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1166 | fread(&iMinMass, sizeof(int), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1167:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1167 | fread(&iMaxMass, sizeof(int), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1168:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1168 | fread(&tNumPeptides, sizeof(uint64_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1185:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1185 | fread(lReadIndex, sizeof(comet_fileoffset_t), iMaxPeptideMass10, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1224:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1224 | fread(&sDBI, sizeof(struct DBIndex), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1229:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1229 | fread(&lSize, sizeof(long), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1233:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1233 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1266:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1266 | fread(&sDBI, sizeof(struct DBIndex), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1269:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1269 | fread(&lSize, sizeof(long), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1273:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1273 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1311:18: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1311 | fread(&lSize, sizeof(long), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1316:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1316 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch.cpp:1323:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1323 | fread(szTmp, sizeof(char)*WIDTH_REFERENCE, 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch.h:21, from CometSearch.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/include/c++/10/bits/stl_heap.h:234:29: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometPreprocess.cpp -c In file included from CometPreprocess.h:21, from CometPreprocess.cpp:19: ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PreprocessThreadData*]’: ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PreprocessThreadData*; ThreadPool::ThreadProc = void (*)(PreprocessThreadData*)]’ CometPreprocess.cpp:74:65: required from here ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometPostAnalysis.cpp -c In file included from CometPostAnalysis.cpp:19: ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PostAnalysisThreadData*]’: ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PostAnalysisThreadData*; ThreadPool::ThreadProc = void (*)(PostAnalysisThreadData*)]’ CometPostAnalysis.cpp:46:38: required from here ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometPostAnalysis.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/include/c++/10/bits/stl_heap.h:234:29: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometMassSpecUtils.cpp -c CometMassSpecUtils.cpp: In static member function ‘static void CometMassSpecUtils::GetProteinName(FILE*, comet_fileoffset_t, char*)’: CometMassSpecUtils.cpp:136:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lSize, sizeof(long), 1, fpdb); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometMassSpecUtils.cpp:141:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 141 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fpdb); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometMassSpecUtils.cpp:148:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 148 | fread(szTmp, sizeof(char)*WIDTH_REFERENCE, 1, fpdb); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometMassSpecUtils.cpp:155:13: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | fscanf(fpdb, "%99s", szProteinName); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWriteOut.cpp -c CometWriteOut.cpp: In static member function ‘static bool CometWriteOut::PrintResults(int, bool, FILE*)’: CometWriteOut.cpp:124:32: warning: ‘%.5d’ directive writing between 5 and 11 bytes into a region of size between 0 and 1022 [-Wformat-overflow=] 124 | sprintf(szOutput, "%s/%s.%.5d.%.5d.%d.out", | ^~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 20 and 1064 bytes into a destination of size 1024 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWriteOut.cpp:115:35: warning: ‘%s’ directive writing up to 511 bytes into a region of size between 506 and 1017 [-Wformat-overflow=] 115 | sprintf(szOutput, "%s_decoy/%s.%.5d.%.5d.%d.out", | ^~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 26 and 1070 bytes into a destination of size 1024 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWriteOut.cpp:273:28: warning: ‘%+d’ directive writing between 2 and 11 bytes into a region of size 9 [-Wformat-overflow=] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~ CometWriteOut.cpp:273:26: note: directive argument in the range [1, 2147483647] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 4 and 13 bytes into a destination of size 10 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWriteOut.cpp:151:59: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 226 [-Wformat-overflow=] 151 | sprintf(szErrorMsg, " Error - cannot write to file %s.\n", szOutput); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 33 and 1056 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWriteSqt.cpp -c g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWritePepXML.cpp -c CometWritePepXML.cpp: In static member function ‘static bool CometWritePepXML::WritePepXMLHeader(FILE*, CometSearchManager&)’: CometWritePepXML.cpp:100:12: warning: ignoring return value of ‘char* realpath(const char*, char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 100 | realpath(g_staticParams.inputFile.szBaseName, resolvedPathBaseName); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometWritePepXML.cpp:101:12: warning: ignoring return value of ‘char* realpath(const char*, char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | realpath(szRunSummaryBaseName, szRunSummaryResolvedPath); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWritePercolator.cpp -c g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometWriteTxt.cpp -c g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometSearchManager.cpp -c In file included from CometSearch.h:21, from CometSearchManager.cpp:19: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/include/c++/10/bits/stl_heap.h:234:29: CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearchManager.cpp: In static member function ‘static bool CometSearchManager::WriteIndexedDatabase()’: CometSearchManager.cpp:2756:28: warning: ‘.idx’ directive writing 4 bytes into a region of size between 1 and 512 [-Wformat-overflow=] 2756 | sprintf(szIndexFile, "%s.idx", g_staticParams.databaseInfo.szDatabase); | ^~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 5 and 516 bytes into a destination of size 512 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp: In member function ‘virtual bool CometSearchManager::DoSearch()’: CometSearchManager.cpp:416:34: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~ CometSearchManager.cpp:416:26: note: directive argument in the range [1, 2147483647] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 9 and 18 bytes into a destination of size 16 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1597:71: warning: ‘%s’ directive writing up to 511 bytes into a region of size 218 [-Wformat-overflow=] 1597 | sprintf(szErrorMsg, " Error - cannot read DIA window file \"%s\".\n", g_staticParams.szDIAWindowsFile); | ^~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 42 and 553 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:223:73: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 987 [-Wformat-overflow=] 223 | sprintf(szErrorMsg, " Error - could not create directory \"%s\".\n", szDecoyDir); | ^~ ~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 1024 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1700:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1700 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoySQT); | ^~ ~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1675:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1675 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputSQT); | ^~ ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1763:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1763 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyTxt); | ^~ ~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1737:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1737 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputTxt); | ^~ ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1826:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1826 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyPepXML); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1800:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1800 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPepXML); | ^~ ~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1854:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1854 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPercolator); | ^~ ~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearchManager.cpp:1975:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 128 [-Wformat-overflow=] 1975 | sprintf(szOut, "%s", szStatusMsg); | ^~ ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 256 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -O3 -fpermissive -Wall -Wextra -Wno-write-strings -std=c++11 -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I. -I/usr/include/libmstoolkit CometCheckForUpdates.cpp -c CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::CheckForUpdates(char*)’: CometCheckForUpdates.cpp:161:11: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size between 895 and 898 [-Wformat-truncation=] 161 | "%s\r\n", host, (int)strlen(postData), postData); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometCheckForUpdates.h:20, from CometCheckForUpdates.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 129 and 1155 bytes into a destination of size 1024 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::SendAnalyticsHit()’: CometCheckForUpdates.cpp:161:11: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size between 895 and 898 [-Wformat-truncation=] 161 | "%s\r\n", host, (int)strlen(postData), postData); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from Common.h:21, from CometCheckForUpdates.h:20, from CometCheckForUpdates.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 129 and 1155 bytes into a destination of size 1024 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ ar rcs libcometsearch.a Threading.o CometInterfaces.o CometSearch.o CometPreprocess.o CometPostAnalysis.o CometMassSpecUtils.o CometWriteOut.o CometWriteSqt.o CometWritePepXML.o CometWritePercolator.o CometWriteTxt.o CometSearchManager.o CometCheckForUpdates.o make[3]: Leaving directory '/<>/comet-ms-2019015+cleaned1/CometSearch' g++ -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch CometSearch/CometCheckForUpdates.cpp CometSearch/CometMassSpecUtils.cpp CometSearch/CometPreprocess.cpp CometSearch/CometSearchManager.cpp CometSearch/CometWritePepXML.cpp CometSearch/CometWriteSqt.cpp CometSearch/Threading.cpp CometSearch/CometInterfaces.cpp CometSearch/CometPostAnalysis.cpp CometSearch/CometSearch.cpp CometSearch/CometWriteOut.cpp CometSearch/CometWritePercolator.cpp CometSearch/CometWriteTxt.cpp Comet.cpp -c CometSearch/CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::SendAnalyticsHit()’: CometSearch/CometCheckForUpdates.cpp:146:17: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 146 | char *host = "www.google-analytics.com"; | ^~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::CheckForUpdates(char*)’: CometSearch/CometCheckForUpdates.cpp:161:11: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size between 895 and 898 [-Wformat-truncation=] 161 | "%s\r\n", host, (int)strlen(postData), postData); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometCheckForUpdates.h:20, from CometSearch/CometCheckForUpdates.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 129 and 1155 bytes into a destination of size 1024 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometCheckForUpdates.cpp: In static member function ‘static void CometCheckForUpdates::SendAnalyticsHit()’: CometSearch/CometCheckForUpdates.cpp:161:11: warning: ‘%s’ directive output may be truncated writing up to 1023 bytes into a region of size between 895 and 898 [-Wformat-truncation=] 161 | "%s\r\n", host, (int)strlen(postData), postData); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometCheckForUpdates.h:20, from CometSearch/CometCheckForUpdates.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:67:35: note: ‘__builtin___snprintf_chk’ output between 129 and 1155 bytes into a destination of size 1024 67 | return __builtin___snprintf_chk (__s, __n, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometMassSpecUtils.cpp: In static member function ‘static void CometMassSpecUtils::GetProteinName(FILE*, comet_fileoffset_t, char*)’: CometSearch/CometMassSpecUtils.cpp:136:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 136 | fread(&lSize, sizeof(long), 1, fpdb); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometMassSpecUtils.cpp:141:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 141 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fpdb); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometMassSpecUtils.cpp:148:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 148 | fread(szTmp, sizeof(char)*WIDTH_REFERENCE, 1, fpdb); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometMassSpecUtils.cpp:155:13: warning: ignoring return value of ‘int fscanf(FILE*, const char*, ...)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 155 | fscanf(fpdb, "%99s", szProteinName); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometPreprocess.h:21, from CometSearch/CometPreprocess.cpp:19: CometSearch/ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PreprocessThreadData*]’: CometSearch/ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PreprocessThreadData*; ThreadPool::ThreadProc = void (*)(PreprocessThreadData*)]’ CometSearch/CometPreprocess.cpp:74:65: required from here CometSearch/ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometSearch.h:21, from CometSearch/CometSearchManager.cpp:19: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/include/c++/10/bits/stl_heap.h:234:29: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometSearchManager.cpp: In static member function ‘static bool CometSearchManager::WriteIndexedDatabase()’: CometSearch/CometSearchManager.cpp:2756:28: warning: ‘.idx’ directive writing 4 bytes into a region of size between 1 and 512 [-Wformat-overflow=] 2756 | sprintf(szIndexFile, "%s.idx", g_staticParams.databaseInfo.szDatabase); | ^~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 5 and 516 bytes into a destination of size 512 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp: In member function ‘virtual bool CometSearchManager::DoSearch()’: CometSearch/CometSearchManager.cpp:416:34: warning: ‘%d’ directive writing between 1 and 10 bytes into a region of size 9 [-Wformat-overflow=] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~ CometSearch/CometSearchManager.cpp:416:26: note: directive argument in the range [1, 2147483647] 416 | sprintf(szIsotope, "ISOTOPE%d", g_staticParams.tolerances.iIsotopeError); | ^~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 9 and 18 bytes into a destination of size 16 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1597:71: warning: ‘%s’ directive writing up to 511 bytes into a region of size 218 [-Wformat-overflow=] 1597 | sprintf(szErrorMsg, " Error - cannot read DIA window file \"%s\".\n", g_staticParams.szDIAWindowsFile); | ^~ ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 42 and 553 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:223:73: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 987 [-Wformat-overflow=] 223 | sprintf(szErrorMsg, " Error - could not create directory \"%s\".\n", szDecoyDir); | ^~ ~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 1024 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1700:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1700 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoySQT); | ^~ ~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1675:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1675 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputSQT); | ^~ ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1763:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1763 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyTxt); | ^~ ~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1737:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1737 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputTxt); | ^~ ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1826:76: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 219 [-Wformat-overflow=] 1826 | sprintf(szErrorMsg, " Error - cannot write to decoy file \"%s\".\n", szOutputDecoyPepXML); | ^~ ~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 41 and 1064 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1800:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1800 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPepXML); | ^~ ~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1854:67: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 225 [-Wformat-overflow=] 1854 | sprintf(szErrorMsg, " Error - cannot write to file \"%s\".\n", szOutputPercolator); | ^~ ~~~~~~~~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 35 and 1058 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearchManager.cpp:1975:32: warning: ‘%s’ directive writing up to 255 bytes into a region of size 128 [-Wformat-overflow=] 1975 | sprintf(szOut, "%s", szStatusMsg); | ^~ ~~~~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometSearchManager.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 1 and 256 bytes into a destination of size 128 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWritePepXML.cpp: In static member function ‘static void CometWritePepXML::ReadInstrument(char*, char*)’: CometSearch/CometWritePepXML.cpp:910:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 910 | GetVal(szMsInstrumentElement, "\"msModel\" value", szModel); | ^~~~~~~~~~~~~~~~~~~ CometSearch/CometWritePepXML.cpp:911:52: warning: ISO C++ forbids converting a string constant to ‘char*’ [-Wwrite-strings] 911 | GetVal(szMsInstrumentElement, "\"msManufacturer\" value", szManufacturer); | ^~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWritePepXML.cpp: In static member function ‘static bool CometWritePepXML::WritePepXMLHeader(FILE*, CometSearchManager&)’: CometSearch/CometWritePepXML.cpp:100:12: warning: ignoring return value of ‘char* realpath(const char*, char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 100 | realpath(g_staticParams.inputFile.szBaseName, resolvedPathBaseName); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWritePepXML.cpp:101:12: warning: ignoring return value of ‘char* realpath(const char*, char*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 101 | realpath(szRunSummaryBaseName, szRunSummaryResolvedPath); | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometPostAnalysis.cpp:19: CometSearch/ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = PostAnalysisThreadData*]’: CometSearch/ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = PostAnalysisThreadData*; ThreadPool::ThreadProc = void (*)(PostAnalysisThreadData*)]’ CometSearch/CometPostAnalysis.cpp:46:38: required from here CometSearch/ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometPostAnalysis.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/include/c++/10/bits/stl_heap.h:234:29: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] In file included from CometSearch/CometSearch.cpp:19: CometSearch/ThreadPool.h: In instantiation of ‘ThreadManager::ThreadManager(ThreadPool*) [with T = SearchThreadData*]’: CometSearch/ThreadPool.h:69:10: required from ‘ThreadPool::ThreadPool(ThreadPool::ThreadProc, int, int, int) [with T = SearchThreadData*; ThreadPool::ThreadProc = void (*)(SearchThreadData*)]’ CometSearch/CometSearch.cpp:138:66: required from here CometSearch/ThreadPool.h:257:13: warning: cast between incompatible function types from ‘uint32_t (*)(void*)’ {aka ‘unsigned int (*)(void*)’} to ‘ThreadProc’ {aka ‘void* (*)(void*)’} [-Wcast-function-type] 257 | reinterpret_cast(ThreadManager::ThreadRoutingFunction), | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp: In static member function ‘static bool CometSearch::RunSearch(int, int, int, int)’: CometSearch/CometSearch.cpp:312:27: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 312 | fgets(szPeffLine, iLenSzLine, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:329:30: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 329 | fgets(szPeffLine+(int)strlen(szPeffLine), iLenSzLine - (int)strlen(szPeffLine), fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:673:18: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 673 | fgets(szBuf, sizeof(szBuf), fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp: In member function ‘void CometSearch::ReadOBO(char*, std::vector*)’: CometSearch/CometSearch.cpp:725:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 725 | fgets(szLineOBO, SIZE_BUF, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:777:18: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 777 | fgets(szLineOBO, SIZE_BUF, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp: In member function ‘bool CometSearch::IndexSearch()’: CometSearch/CometSearch.cpp:1159:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1159 | fread(&lEndOfStruct, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1166:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1166 | fread(&iMinMass, sizeof(int), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1167:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1167 | fread(&iMaxMass, sizeof(int), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1168:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1168 | fread(&tNumPeptides, sizeof(uint64_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1185:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1185 | fread(lReadIndex, sizeof(comet_fileoffset_t), iMaxPeptideMass10, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1224:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1224 | fread(&sDBI, sizeof(struct DBIndex), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1229:9: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1229 | fread(&lSize, sizeof(long), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1233:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1233 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1266:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1266 | fread(&sDBI, sizeof(struct DBIndex), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1269:12: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1269 | fread(&lSize, sizeof(long), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1273:15: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1273 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1311:18: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1311 | fread(&lSize, sizeof(long), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1316:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1316 | fread(&tmpoffset, sizeof(comet_fileoffset_t), 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometSearch.cpp:1323:21: warning: ignoring return value of ‘size_t fread(void*, size_t, size_t, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1323 | fread(szTmp, sizeof(char)*WIDTH_REFERENCE, 1, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from CometSearch/CometSearch.h:21, from CometSearch/CometSearch.cpp:18: In member function ‘Results& Results::operator=(Results&&)’, inlined from ‘void std::__adjust_heap(_RandomAccessIterator, _Distance, _Distance, _Tp, _Compare) [with _RandomAccessIterator = Results*; _Distance = long int; _Tp = Results; _Compare = __gnu_cxx::__ops::_Iter_comp_iter]’ at /usr/include/c++/10/bits/stl_heap.h:234:29: CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] 174 | struct Results | ^~~~~~~ CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometDataInternal.h:174:8: warning: writing 1 byte into a region of size 0 [-Wstringop-overflow=] CometSearch/CometWriteOut.cpp: In static member function ‘static bool CometWriteOut::PrintResults(int, bool, FILE*)’: CometSearch/CometWriteOut.cpp:124:32: warning: ‘%.5d’ directive writing between 5 and 11 bytes into a region of size between 0 and 1022 [-Wformat-overflow=] 124 | sprintf(szOutput, "%s/%s.%.5d.%.5d.%d.out", | ^~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 20 and 1064 bytes into a destination of size 1024 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWriteOut.cpp:115:35: warning: ‘%s’ directive writing up to 511 bytes into a region of size between 506 and 1017 [-Wformat-overflow=] 115 | sprintf(szOutput, "%s_decoy/%s.%.5d.%.5d.%d.out", | ^~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 26 and 1070 bytes into a destination of size 1024 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWriteOut.cpp:273:28: warning: ‘%+d’ directive writing between 2 and 11 bytes into a region of size 9 [-Wformat-overflow=] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~ CometSearch/CometWriteOut.cpp:273:26: note: directive argument in the range [1, 2147483647] 273 | sprintf(szTempStr, " %+d", iLenMaxDuplicates); | ^~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 4 and 13 bytes into a destination of size 10 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ CometSearch/CometWriteOut.cpp:151:59: warning: ‘%s’ directive writing up to 1023 bytes into a region of size 226 [-Wformat-overflow=] 151 | sprintf(szErrorMsg, " Error - cannot write to file %s.\n", szOutput); | ^~ ~~~~~~~~ In file included from /usr/include/stdio.h:867, from /usr/include/c++/10/cstdio:42, from /usr/include/c++/10/ext/string_conversions.h:43, from /usr/include/c++/10/bits/basic_string.h:6535, from /usr/include/c++/10/string:55, from CometSearch/Common.h:21, from CometSearch/CometWriteOut.cpp:17: /usr/include/s390x-linux-gnu/bits/stdio2.h:36:34: note: ‘__builtin___sprintf_chk’ output between 33 and 1056 bytes into a destination of size 256 36 | return __builtin___sprintf_chk (__s, __USE_FORTIFY_LEVEL - 1, | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 | __bos (__s), __fmt, __va_arg_pack ()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Comet.cpp: In function ‘void LoadParameters(char*, CometInterfaces::ICometSearchManager*)’: Comet.cpp:1143:9: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1143 | fgets(szParamBuf, SIZE_BUF, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ Comet.cpp:1196:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’ declared with attribute ‘warn_unused_result’ [-Wunused-result] 1196 | fgets(szParamBuf, SIZE_BUF, fp); | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ cd CometSearch ; make make[3]: Entering directory '/<>/comet-ms-2019015+cleaned1/CometSearch' make[3]: warning: jobserver unavailable: using -j1. Add '+' to parent make rule. ar rcs libcometsearch.a Threading.o CometInterfaces.o CometSearch.o CometPreprocess.o CometPostAnalysis.o CometMassSpecUtils.o CometWriteOut.o CometWriteSqt.o CometWritePepXML.o CometWritePercolator.o CometWriteTxt.o CometSearchManager.o CometCheckForUpdates.o make[3]: Leaving directory '/<>/comet-ms-2019015+cleaned1/CometSearch' g++ Comet.o CometSearch/CometCheckForUpdates.o CometSearch/CometMassSpecUtils.o CometSearch/CometPreprocess.o CometSearch/CometSearchManager.o CometSearch/CometWritePepXML.o CometSearch/CometWriteSqt.o CometSearch/Threading.o CometSearch/CometInterfaces.o CometSearch/CometPostAnalysis.o CometSearch/CometSearch.o CometSearch/CometWriteOut.o CometSearch/CometWritePercolator.o CometSearch/CometWriteTxt.o -o comet-ms -g -O2 -fdebug-prefix-map=/<>/comet-ms-2019015+cleaned1=. -fstack-protector-strong -Wformat -Werror=format-security -O3 -fpermissive -Wall -Wextra -Wno-char-subscripts -DCURL_STATICLIB -DHTTP_ONLY -D_LARGEFILE_SOURCE -D_FILE_OFFSET_BITS=64 -D__LINUX__ -I/usr/include/libmstoolkit -ICometSearch -L/usr/lib -lmstoolkitlite -lm -lpthread make[2]: Leaving directory '/<>/comet-ms-2019015+cleaned1' make[1]: Leaving directory '/<>/comet-ms-2019015+cleaned1' dh_auto_test -a create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a rm -f -- debian/comet-ms.substvars rm -fr -- debian/.debhelper/generated/comet-ms/ debian/comet-ms/ debian/tmp/ dh_installdirs -a install -d debian/comet-ms/usr/bin dh_auto_install -a dh_install -a cp --reflink=auto -a ./comet-ms debian/comet-ms/usr/bin/ install -d debian/.debhelper/generated/comet-ms dh_installdocs -a install -d debian/comet-ms/usr/share/doc/comet-ms install -p -m0644 debian/copyright debian/comet-ms/usr/share/doc/comet-ms/copyright dh_installchangelogs -a install -p -m0644 debian/changelog debian/comet-ms/usr/share/doc/comet-ms/changelog.Debian dh_installman -a install -d debian/comet-ms/usr/share/man/man1/ install -p -m0644 ./debian/comet-ms.1 debian/comet-ms/usr/share/man/man1/comet-ms.1 man-recode --to-code UTF-8 --suffix .dh-new debian/comet-ms/usr/share/man/man1/comet-ms.1 mv debian/comet-ms/usr/share/man/man1/comet-ms.1.dh-new debian/comet-ms/usr/share/man/man1/comet-ms.1 chmod 0644 -- debian/comet-ms/usr/share/man/man1/comet-ms.1 dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a cd debian/comet-ms chmod a-x usr/share/doc/comet-ms/changelog.Debian usr/share/man/man1/comet-ms.1 gzip -9nf usr/share/doc/comet-ms/changelog.Debian usr/share/man/man1/comet-ms.1 cd '/<>/comet-ms-2019015+cleaned1' dh_fixperms -a find debian/comet-ms -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/comet-ms ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/comet-ms/usr/share/doc -type f -a -true -a ! -regex 'debian/comet-ms/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/comet-ms/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/comet-ms/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/comet-ms -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/comet-ms/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x dh_missing -a dh_dwz -a dwz -- debian/comet-ms/usr/bin/comet-ms dh_strip -a install -d debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/03 objcopy --only-keep-debug --compress-debug-sections debian/comet-ms/usr/bin/comet-ms debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/03/e1ccd0964070c41d67a731930f0c8f217f18c3.debug chmod 0644 -- debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/03/e1ccd0964070c41d67a731930f0c8f217f18c3.debug chown 0:0 -- debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/03/e1ccd0964070c41d67a731930f0c8f217f18c3.debug strip --remove-section=.comment --remove-section=.note debian/comet-ms/usr/bin/comet-ms objcopy --add-gnu-debuglink debian/.debhelper/comet-ms/dbgsym-root/usr/lib/debug/.build-id/03/e1ccd0964070c41d67a731930f0c8f217f18c3.debug debian/comet-ms/usr/bin/comet-ms install -d debian/.debhelper/comet-ms/dbgsym-root/usr/share/doc ln -s comet-ms debian/.debhelper/comet-ms/dbgsym-root/usr/share/doc/comet-ms-dbgsym dh_makeshlibs -a rm -f debian/comet-ms/DEBIAN/shlibs dh_shlibdeps -a install -d debian/comet-ms/DEBIAN dpkg-shlibdeps -Tdebian/comet-ms.substvars debian/comet-ms/usr/bin/comet-ms dh_installdeb -a dh_gencontrol -a echo misc:Depends= >> debian/comet-ms.substvars echo misc:Pre-Depends= >> debian/comet-ms.substvars install -d debian/.debhelper/comet-ms/dbgsym-root/DEBIAN dpkg-gencontrol -pcomet-ms -ldebian/changelog -Tdebian/comet-ms.substvars -Pdebian/.debhelper/comet-ms/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=comet-ms-dbgsym "-DDepends=comet-ms (= \${binary:Version})" "-DDescription=debug symbols for comet-ms" -DBuild-Ids=03e1ccd0964070c41d67a731930f0c8f217f18c3 -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcomet-ms -ldebian/changelog -Tdebian/comet-ms.substvars -Pdebian/comet-ms chmod 0644 -- debian/comet-ms/DEBIAN/control chown 0:0 -- debian/comet-ms/DEBIAN/control dh_md5sums -a cd debian/comet-ms >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/comet-ms/DEBIAN/md5sums chown 0:0 -- debian/comet-ms/DEBIAN/md5sums cd debian/.debhelper/comet-ms/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/md5sums dh_builddeb -a dpkg-deb --build debian/comet-ms .. install -d debian/.debhelper/scratch-space/build-comet-ms dpkg-deb --build debian/.debhelper/comet-ms/dbgsym-root debian/.debhelper/scratch-space/build-comet-ms INFO: pkgstriptranslations version 146 INFO: pkgstriptranslations version 146 pkgstriptranslations: processing comet-ms (in debian/comet-ms); do_strip: , oemstrip: pkgstriptranslations: processing comet-ms-dbgsym (in debian/.debhelper/comet-ms/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/comet-ms/DEBIAN/control, package comet-ms, directory debian/comet-ms pkgstripfiles: Truncating usr/share/doc/comet-ms/changelog.Debian.gz to topmost ten records pkgstripfiles: processing control file: debian/.debhelper/comet-ms/dbgsym-root/DEBIAN/control, package comet-ms-dbgsym, directory debian/.debhelper/comet-ms/dbgsym-root dpkg-deb: building package 'comet-ms-dbgsym' in 'debian/.debhelper/scratch-space/build-comet-ms/comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package comet-ms ... pkgstripfiles: No PNG files. dpkg-deb: building package 'comet-ms' in '../comet-ms_2019015+cleaned1-3_s390x.deb'. Renaming comet-ms-dbgsym_2019015+cleaned1-3_s390x.deb to comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb mv debian/.debhelper/scratch-space/build-comet-ms/comet-ms-dbgsym_2019015\+cleaned1-3_s390x.deb ../comet-ms-dbgsym_2019015\+cleaned1-3_s390x.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../comet-ms_2019015+cleaned1-3_s390x.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2020-08-14T05:16:44Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ comet-ms_2019015+cleaned1-3_s390x.changes: ------------------------------------------ Format: 1.8 Date: Thu, 13 Aug 2020 23:49:04 +0200 Source: comet-ms Binary: comet-ms Architecture: s390x Version: 2019015+cleaned1-3 Distribution: groovy-proposed Urgency: low Maintainer: Launchpad Build Daemon Changed-By: Filippo Rusconi Description: comet-ms - Tandem mass spectrometry (MS/MS) search engine Closes: 929760 Changes: comet-ms (2019015+cleaned1-3) unstable; urgency=low . * d/rules: Fix problem with invoking 'make' for building the software. Replace with dh_auto_build (thanks to Helmut Grohne for the report and the patch; Closes: #929760) Checksums-Sha1: 02c85fbb7a6836ab6af38944c043e1fbab140315 1663688 comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb e3d624851852d27d1c76438e5b0271eca6e4c561 5432 comet-ms_2019015+cleaned1-3_s390x.buildinfo e9a0186cb41cab8a214ff6ad5ef0259a77edcf8b 799564 comet-ms_2019015+cleaned1-3_s390x.deb Checksums-Sha256: cef7b4cf46bb80c27e52a31c5a150034f423194afa8942f0f7d026470df6f8e9 1663688 comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb 63263392d91887f96e975096af57a8322f585cab73f46f8342c22b4783a550bb 5432 comet-ms_2019015+cleaned1-3_s390x.buildinfo 18dbc466e411dfc52810248164ae2a59d9c1ba69e1c35fb8b5c0358121b493d1 799564 comet-ms_2019015+cleaned1-3_s390x.deb Files: d3beac5291c10fbf82e642d8a950f247 1663688 debug optional comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb 8da10330dc1e375306eafb3827250237 5432 science optional comet-ms_2019015+cleaned1-3_s390x.buildinfo ee99135e1a0a437f4c748c9206e372f4 799564 science optional comet-ms_2019015+cleaned1-3_s390x.deb +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ Format: 1.0 Source: comet-ms Binary: comet-ms comet-ms-dbgsym Architecture: s390x Version: 2019015+cleaned1-3 Checksums-Md5: d3beac5291c10fbf82e642d8a950f247 1663688 comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb ee99135e1a0a437f4c748c9206e372f4 799564 comet-ms_2019015+cleaned1-3_s390x.deb Checksums-Sha1: 02c85fbb7a6836ab6af38944c043e1fbab140315 1663688 comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb e9a0186cb41cab8a214ff6ad5ef0259a77edcf8b 799564 comet-ms_2019015+cleaned1-3_s390x.deb Checksums-Sha256: cef7b4cf46bb80c27e52a31c5a150034f423194afa8942f0f7d026470df6f8e9 1663688 comet-ms-dbgsym_2019015+cleaned1-3_s390x.ddeb 18dbc466e411dfc52810248164ae2a59d9c1ba69e1c35fb8b5c0358121b493d1 799564 comet-ms_2019015+cleaned1-3_s390x.deb Build-Origin: Ubuntu Build-Architecture: s390x Build-Date: Fri, 14 Aug 2020 05:16:44 +0000 Build-Path: /<>/comet-ms-2019015+cleaned1 Build-Tainted-By: usr-local-has-programs Installed-Build-Depends: autoconf (= 2.69-11.1), automake (= 1:1.16.2-3ubuntu2), autopoint (= 0.19.8.1-10build1), autotools-dev (= 20180224.1), base-files (= 11ubuntu11), base-passwd (= 3.5.47), bash (= 5.0-6ubuntu2), binutils (= 2.35-2ubuntu1), binutils-common (= 2.35-2ubuntu1), binutils-s390x-linux-gnu (= 2.35-2ubuntu1), bsdextrautils (= 2.36-2ubuntu1), bsdutils (= 1:2.36-2ubuntu1), build-essential (= 12.8ubuntu3), bzip2 (= 1.0.8-4ubuntu2), coreutils (= 8.32-3ubuntu1), cpp (= 4:10.1.0-1ubuntu1), cpp-10 (= 10.2.0-5ubuntu2), dash (= 0.5.10.2-7), debconf (= 1.5.74), debhelper (= 13.2ubuntu1), debianutils (= 4.11), dh-autoreconf (= 19), dh-strip-nondeterminism (= 1.9.0-1), diffutils (= 1:3.7-3build1), docbook (= 4.5-6), docbook-to-man (= 1:2.0.0-42), dpkg (= 1.20.5ubuntu1), dpkg-dev (= 1.20.5ubuntu1), dwz (= 0.13-5), file (= 1:5.38-5), findutils (= 4.7.0-1ubuntu1), g++ (= 4:10.1.0-1ubuntu1), g++-10 (= 10.2.0-5ubuntu2), gcc (= 4:10.1.0-1ubuntu1), gcc-10 (= 10.2.0-5ubuntu2), gcc-10-base (= 10.2.0-5ubuntu2), gettext (= 0.19.8.1-10build1), gettext-base (= 0.19.8.1-10build1), grep (= 3.4-1), groff-base (= 1.22.4-5), gzip (= 1.10-2ubuntu1), hostname (= 3.23), init-system-helpers (= 1.58), intltool-debian (= 0.35.0+20060710.5), libacl1 (= 2.2.53-8), libarchive-zip-perl (= 1.68-1), libasan6 (= 10.2.0-5ubuntu2), libatomic1 (= 10.2.0-5ubuntu2), libattr1 (= 1:2.4.48-5), libaudit-common (= 1:2.8.5-3ubuntu1), libaudit1 (= 1:2.8.5-3ubuntu1), libbinutils (= 2.35-2ubuntu1), libblkid1 (= 2.36-2ubuntu1), libbz2-1.0 (= 1.0.8-4ubuntu2), libc-bin (= 2.31-0ubuntu10), libc-dev-bin (= 2.31-0ubuntu10), libc6 (= 2.31-0ubuntu10), libc6-dev (= 2.31-0ubuntu10), libcap-ng0 (= 0.7.9-2.2), libcc1-0 (= 10.2.0-5ubuntu2), libcroco3 (= 0.6.13-1), libcrypt-dev (= 1:4.4.16-1ubuntu1), libcrypt1 (= 1:4.4.16-1ubuntu1), libctf-nobfd0 (= 2.35-2ubuntu1), libctf0 (= 2.35-2ubuntu1), libdb5.3 (= 5.3.28+dfsg1-0.6ubuntu2), libdebconfclient0 (= 0.252ubuntu1), libdebhelper-perl (= 13.2ubuntu1), libdpkg-perl (= 1.20.5ubuntu1), libelf1 (= 0.180-1), libexpat1 (= 2.2.9-1build1), libexpat1-dev (= 2.2.9-1build1), libffi7 (= 3.3-4), libfile-stripnondeterminism-perl (= 1.9.0-1), libgcc-10-dev (= 10.2.0-5ubuntu2), libgcc-s1 (= 10.2.0-5ubuntu2), libgcrypt20 (= 1.8.5-5ubuntu2), libgdbm-compat4 (= 1.18.1-5ubuntu1), libgdbm6 (= 1.18.1-5ubuntu1), libglib2.0-0 (= 2.64.4-1), libgmp10 (= 2:6.2.0+dfsg-6ubuntu1), libgomp1 (= 10.2.0-5ubuntu2), libgpg-error0 (= 1.38-2), libicu67 (= 67.1-3ubuntu1), libisl22 (= 0.22.1-1), libitm1 (= 10.2.0-5ubuntu2), liblz4-1 (= 1.9.2-2), liblzma5 (= 5.2.4-1ubuntu1), libmagic-mgc (= 1:5.38-5), libmagic1 (= 1:5.38-5), libmount1 (= 2.36-2ubuntu1), libmpc3 (= 1.2.0~rc1-1), libmpfr6 (= 4.1.0-3), libmstoolkit-dev (= 82-7), libmstoolkit82 (= 82-7), libosp5 (= 1.5.2-13ubuntu3), libpam-modules (= 1.3.1-5ubuntu6), libpam-modules-bin (= 1.3.1-5ubuntu6), libpam-runtime (= 1.3.1-5ubuntu6), libpam0g (= 1.3.1-5ubuntu6), libpcre2-8-0 (= 10.34-7), libpcre3 (= 2:8.39-13), libperl5.30 (= 5.30.3-4), libpipeline1 (= 1.5.3-1), libseccomp2 (= 2.4.3-1ubuntu4), libselinux1 (= 3.1-2), libsigsegv2 (= 2.12-2build1), libsmartcols1 (= 2.36-2ubuntu1), libsqlite3-0 (= 3.32.3-1), libsqlite3-dev (= 3.32.3-1), libstdc++-10-dev (= 10.2.0-5ubuntu2), libstdc++6 (= 10.2.0-5ubuntu2), libsub-override-perl (= 0.09-2), libsystemd0 (= 246-2ubuntu1), libtinfo6 (= 6.2-1), libtool (= 2.4.6-14), libubsan1 (= 10.2.0-5ubuntu2), libuchardet0 (= 0.0.7-1), libudev1 (= 246-2ubuntu1), libunistring2 (= 0.9.10-4), libuuid1 (= 2.36-2ubuntu1), libxml2 (= 2.9.10+dfsg-5build1), libzstd1 (= 1.4.5+dfsg-4), linux-libc-dev (= 5.8.0-16.17), login (= 1:4.8.1-1ubuntu6), lsb-base (= 11.1.0ubuntu2), m4 (= 1.4.18-4), make (= 4.3-4ubuntu1), man-db (= 2.9.3-2), mawk (= 1.3.4.20200120-2), ncurses-base (= 6.2-1), ncurses-bin (= 6.2-1), opensp (= 1.5.2-13ubuntu3), patch (= 2.7.6-6), perl (= 5.30.3-4), perl-base (= 5.30.3-4), perl-modules-5.30 (= 5.30.3-4), po-debconf (= 1.0.21), sed (= 4.7-1build1), sensible-utils (= 0.0.13), sgml-base (= 1.30), sgml-data (= 2.0.11), sysvinit-utils (= 2.96-3ubuntu1), tar (= 1.30+dfsg-7), util-linux (= 2.36-2ubuntu1), xml-core (= 0.18+nmu1), xz-utils (= 5.2.4-1ubuntu1), zlib1g (= 1:1.2.11.dfsg-2ubuntu1), zlib1g-dev (= 1:1.2.11.dfsg-2ubuntu1) Environment: DEB_BUILD_OPTIONS="parallel=4" LANG="C.UTF-8" LC_ALL="C.UTF-8" SOURCE_DATE_EPOCH="1597355344" +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ comet-ms_2019015+cleaned1-3_s390x.deb ------------------------------------- new Debian package, version 2.0. size 799564 bytes: control archive=892 bytes. 841 bytes, 18 lines control 262 bytes, 4 lines md5sums Package: comet-ms Version: 2019015+cleaned1-3 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: The Debichem Group Installed-Size: 2437 Depends: libmstoolkit82 (>= 82), libc6 (>= 2.29), libgcc-s1 (>= 3.0), libstdc++6 (>= 9) Section: science Priority: optional Homepage: http://comet-ms.sourceforge.net Description: Tandem mass spectrometry (MS/MS) search engine Comet is an open source tandem mass spectrometry (MS/MS) sequence database search engine. It identifies peptides by searching MS/MS spectra against sequences present in protein sequence databases. . This package ships a binary that does MS/MS database searches. Supported input formats are mzXML, mzML, and ms2 files. Supported output formats are .out, SQT, and pepXML. drwxr-xr-x root/root 0 2020-08-13 21:49 ./ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/bin/ -rwxr-xr-x root/root 2479208 2020-08-13 21:49 ./usr/bin/comet-ms drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/doc/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/doc/comet-ms/ -rw-r--r-- root/root 1107 2020-08-13 21:49 ./usr/share/doc/comet-ms/changelog.Debian.gz -rw-r--r-- root/root 2584 2020-08-13 21:49 ./usr/share/doc/comet-ms/copyright drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/man/ drwxr-xr-x root/root 0 2020-08-13 21:49 ./usr/share/man/man1/ -rw-r--r-- root/root 668 2020-08-13 21:49 ./usr/share/man/man1/comet-ms.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build Type: any Build-Space: n/a Build-Time: 251 Distribution: groovy-proposed Host Architecture: s390x Install-Time: 7 Job: comet-ms_2019015+cleaned1-3.dsc Machine Architecture: s390x Package: comet-ms Package-Time: 260 Source-Version: 2019015+cleaned1-3 Space: n/a Status: successful Version: 2019015+cleaned1-3 -------------------------------------------------------------------------------- Finished at 2020-08-14T05:16:44Z Build needed 00:04:20, no disk space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=groovy --arch=s390x PACKAGEBUILD-19828017 Scanning for processes to kill in build PACKAGEBUILD-19828017