https://launchpad.net/ubuntu/+source/cmtk/3.3.1p1+dfsg-2build1/+build/18878160 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux lgw01-amd64-010 4.4.0-176-generic #206-Ubuntu SMP Fri Feb 28 05:02:04 UTC 2020 x86_64 Buildd toolchain package versions: launchpad-buildd_186 python-lpbuildd_186 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.6~git201906051340.ff11471~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.7 dpkg-dev_1.18.4ubuntu1.6 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 23 Mar 06:52:39 ntpdate[1930]: adjust time server 10.211.37.1 offset 0.006895 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18878160 --image-type chroot /home/buildd/filecache-default/e96c25c651525abc9f0cabeb95ea71010abf4ecb Creating target for build PACKAGEBUILD-18878160 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18878160 Starting target for build PACKAGEBUILD-18878160 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18878160 'deb http://ftpmaster.internal/ubuntu focal main universe' 'deb http://ftpmaster.internal/ubuntu focal-security main universe' 'deb http://ftpmaster.internal/ubuntu focal-updates main universe' 'deb http://ftpmaster.internal/ubuntu focal-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-18878160 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18878160 Updating target for build PACKAGEBUILD-18878160 Get:1 http://ftpmaster.internal/ubuntu focal InRelease [255 kB] Get:2 http://ftpmaster.internal/ubuntu focal-security InRelease [79.7 kB] Get:3 http://ftpmaster.internal/ubuntu focal-updates InRelease [79.7 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed InRelease [255 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 Packages [976 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main Translation-en [502 kB] Get:7 http://ftpmaster.internal/ubuntu focal/universe amd64 Packages [8617 kB] Get:8 http://ftpmaster.internal/ubuntu focal/universe Translation-en [5150 kB] Get:9 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 Packages [104 kB] Get:10 http://ftpmaster.internal/ubuntu focal-proposed/main Translation-en [44.7 kB] Get:11 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 Packages [445 kB] Get:12 http://ftpmaster.internal/ubuntu focal-proposed/universe Translation-en [247 kB] Fetched 16.8 MB in 5s (3484 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: gcc-10-base libapt-pkg6.0 libcrypt-dev libcrypt1 libctf-nobfd0 libctf0 libffi7 libgcc-s1 libhogweed5 libisl22 libnettle7 libperl5.30 libprocps8 perl-modules-5.30 The following packages will be upgraded: advancecomp apt base-files base-passwd bash binutils binutils-common binutils-x86-64-linux-gnu bsdutils bzip2 cpp-9 debianutils e2fsprogs fdisk findutils g++-9 gcc-9 gcc-9-base gpg gpg-agent gpgconf gpgv grep gzip hostname libacl1 libapparmor1 libapt-pkg5.90 libasan5 libassuan0 libatomic1 libattr1 libaudit-common libaudit1 libbinutils libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcap-ng0 libcap2 libcc1-0 libcom-err2 libcryptsetup12 libdb5.3 libdebconfclient0 libdevmapper1.02.1 libext2fs2 libfdisk1 libgcc-9-dev libgcc1 libgcrypt20 libgmp10 libgnutls30 libgomp1 libgpg-error0 libip4tc2 libitm1 libjson-c4 libkmod2 liblockfile-bin liblockfile1 liblsan0 liblz4-1 libmount1 libncurses6 libncursesw6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libpcre2-8-0 libpcre3 libpng16-16 libquadmath0 libreadline8 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-9-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo6 libtsan0 libubsan1 libudev1 libuuid1 libzstd1 linux-libc-dev login logsave lsb-base mawk mount ncurses-base ncurses-bin openssl passwd perl perl-base pinentry-curses procps readline-common sensible-utils systemd systemd-sysv sysvinit-utils tzdata ubuntu-keyring util-linux zlib1g 121 upgraded, 14 newly installed, 0 to remove and 0 not upgraded. Need to get 71.3 MB of archives. After this operation, 52.5 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu focal/main amd64 gcc-10-base amd64 10-20200321-1ubuntu1 [18.7 kB] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libgcc-s1 amd64 10-20200321-1ubuntu1 [41.5 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 libc6-dev amd64 2.31-0ubuntu6 [2515 kB] Get:4 http://ftpmaster.internal/ubuntu focal/main amd64 libc-dev-bin amd64 2.31-0ubuntu6 [71.6 kB] Get:5 http://ftpmaster.internal/ubuntu focal/main amd64 libcrypt-dev amd64 1:4.4.10-10ubuntu4 [104 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 linux-libc-dev amd64 5.4.0-18.22 [1156 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 libcrypt1 amd64 1:4.4.10-10ubuntu4 [78.2 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 libc6 amd64 2.31-0ubuntu6 [2715 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 libc-bin amd64 2.31-0ubuntu6 [633 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 base-files amd64 11ubuntu4 [60.2 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 debianutils amd64 4.9.1 [85.8 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 bash amd64 5.0-6ubuntu1 [638 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main amd64 bsdutils amd64 1:2.34-0.1ubuntu8 [63.1 kB] Get:14 http://ftpmaster.internal/ubuntu focal/main amd64 findutils amd64 4.7.0-1ubuntu1 [329 kB] Get:15 http://ftpmaster.internal/ubuntu focal/main amd64 grep amd64 3.4-1 [151 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main amd64 gzip amd64 1.10-0ubuntu4 [95.3 kB] Get:17 http://ftpmaster.internal/ubuntu focal/main amd64 hostname amd64 3.23 [11.4 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 login amd64 1:4.8.1-1ubuntu3 [221 kB] Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 libncurses6 amd64 6.2-0ubuntu2 [101 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 libtinfo6 amd64 6.2-0ubuntu2 [87.0 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-bin amd64 6.2-0ubuntu2 [173 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 libncursesw6 amd64 6.2-0ubuntu2 [132 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 perl-modules-5.30 all 5.30.0-9build1 [2737 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 libperl5.30 amd64 5.30.0-9build1 [3943 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 perl amd64 5.30.0-9build1 [224 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 perl-base amd64 5.30.0-9build1 [1511 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 bzip2 amd64 1.0.8-2 [34.1 kB] Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 libbz2-1.0 amd64 1.0.8-2 [32.3 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main amd64 libdb5.3 amd64 5.3.28+dfsg1-0.6ubuntu2 [675 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 zlib1g amd64 1:1.2.11.dfsg-2ubuntu1 [53.7 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 libblkid1 amd64 2.34-0.1ubuntu8 [137 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 libuuid1 amd64 2.34-0.1ubuntu8 [20.1 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main amd64 libfdisk1 amd64 2.34-0.1ubuntu8 [175 kB] Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 libpcre2-8-0 amd64 10.34-7 [197 kB] Get:35 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libselinux1 amd64 3.0-1build2 [68.8 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 libmount1 amd64 2.34-0.1ubuntu8 [149 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 libsmartcols1 amd64 2.34-0.1ubuntu8 [100 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 fdisk amd64 2.34-0.1ubuntu8 [120 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 util-linux amd64 2.34-0.1ubuntu8 [1021 kB] Get:40 http://ftpmaster.internal/ubuntu focal/main amd64 libdebconfclient0 amd64 0.251ubuntu1 [6160 B] Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 base-passwd amd64 3.5.47 [47.7 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 ncurses-base all 6.2-0ubuntu2 [18.7 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main amd64 lsb-base all 11.1.0ubuntu2 [12.1 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main amd64 sysvinit-utils amd64 2.96-2.1ubuntu1 [20.6 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main amd64 libgpg-error0 amd64 1.37-1 [58.0 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 libgcrypt20 amd64 1.8.5-5ubuntu1 [419 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 liblz4-1 amd64 1.9.2-2 [55.9 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main amd64 libstdc++6 amd64 10-20200321-1ubuntu1 [503 kB] Get:49 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 systemd-sysv amd64 245.2-1ubuntu1 [9524 B] Get:50 http://ftpmaster.internal/ubuntu focal/main amd64 libacl1 amd64 2.2.53-6 [18.8 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 libapparmor1 amd64 2.13.3-7ubuntu2 [34.1 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit-common all 1:2.8.5-2ubuntu6 [3936 B] Get:53 http://ftpmaster.internal/ubuntu focal/main amd64 libcap-ng0 amd64 0.7.9-2.1build1 [11.1 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main amd64 libaudit1 amd64 1:2.8.5-2ubuntu6 [38.9 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main amd64 libcap2 amd64 1:2.32-1 [15.9 kB] Get:56 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libudev1 amd64 245.2-1ubuntu1 [77.8 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main amd64 libdevmapper1.02.1 amd64 2:1.02.167-1ubuntu1 [127 kB] Get:58 http://ftpmaster.internal/ubuntu focal/main amd64 libjson-c4 amd64 0.13.1+dfsg-7 [29.2 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main amd64 libssl1.1 amd64 1.1.1d-2ubuntu6 [1318 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main amd64 libcryptsetup12 amd64 2:2.2.2-3ubuntu2 [182 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main amd64 libnettle7 amd64 3.5.1+really3.5.1-2 [114 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main amd64 libgmp10 amd64 2:6.2.0+dfsg-4 [240 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main amd64 libhogweed5 amd64 3.5.1+really3.5.1-2 [138 kB] Get:64 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libffi7 amd64 3.3-3build1 [19.7 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main amd64 libp11-kit0 amd64 0.23.20-1build1 [188 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main amd64 libtasn1-6 amd64 4.16.0-2 [38.1 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main amd64 libgnutls30 amd64 3.6.11.1-2ubuntu2 [793 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main amd64 libip4tc2 amd64 1.8.4-3ubuntu2 [18.8 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main amd64 libkmod2 amd64 27-1ubuntu2 [44.3 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main amd64 libpam0g amd64 1.3.1-5ubuntu4 [55.4 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main amd64 libseccomp2 amd64 2.4.3-0ubuntu2 [40.0 kB] Get:72 http://ftpmaster.internal/ubuntu focal/main amd64 mount amd64 2.34-0.1ubuntu8 [115 kB] Get:73 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 systemd amd64 245.2-1ubuntu1 [3806 kB] Get:74 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libsystemd0 amd64 245.2-1ubuntu1 [270 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main amd64 libzstd1 amd64 1.4.4+dfsg-3 [237 kB] Get:76 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libapt-pkg6.0 amd64 2.0.0 [832 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main amd64 libapt-pkg5.90 amd64 1.9.10 [852 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main amd64 gpgv amd64 2.2.19-3ubuntu2 [200 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main amd64 ubuntu-keyring all 2020.02.11.1 [22.3 kB] Get:80 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 apt amd64 2.0.0 [1285 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-modules-bin amd64 1.3.1-5ubuntu4 [37.7 kB] Get:82 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-modules amd64 1.3.1-5ubuntu4 [250 kB] Get:83 http://ftpmaster.internal/ubuntu focal/main amd64 logsave amd64 1.45.5-2ubuntu1 [10.2 kB] Get:84 http://ftpmaster.internal/ubuntu focal/main amd64 libext2fs2 amd64 1.45.5-2ubuntu1 [183 kB] Get:85 http://ftpmaster.internal/ubuntu focal/main amd64 e2fsprogs amd64 1.45.5-2ubuntu1 [527 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main amd64 libattr1 amd64 1:2.4.48-5 [12.7 kB] Get:87 http://ftpmaster.internal/ubuntu focal/universe amd64 libgcc1 amd64 1:10-20200321-1ubuntu1 [41.5 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main amd64 libpam-runtime all 1.3.1-5ubuntu4 [37.3 kB] Get:89 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libpcre3 amd64 2:8.39-12build1 [232 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main amd64 libsepol1 amd64 3.0-1 [252 kB] Get:91 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libsemanage-common all 3.0-1build2 [9792 B] Get:92 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libsemanage1 amd64 3.0-1build2 [85.5 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main amd64 passwd amd64 1:4.8.1-1ubuntu3 [797 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main amd64 libisl22 amd64 0.22.1-1 [592 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main amd64 libcc1-0 amd64 10-20200321-1ubuntu1 [41.1 kB] Get:96 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libctf-nobfd0 amd64 2.34-5ubuntu1 [46.9 kB] Get:97 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libctf0 amd64 2.34-5ubuntu1 [46.7 kB] Get:98 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libbinutils amd64 2.34-5ubuntu1 [476 kB] Get:99 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 binutils-common amd64 2.34-5ubuntu1 [207 kB] Get:100 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 binutils amd64 2.34-5ubuntu1 [3376 B] Get:101 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 binutils-x86-64-linux-gnu amd64 2.34-5ubuntu1 [1613 kB] Get:102 http://ftpmaster.internal/ubuntu focal/main amd64 libgomp1 amd64 10-20200321-1ubuntu1 [101 kB] Get:103 http://ftpmaster.internal/ubuntu focal/main amd64 libitm1 amd64 10-20200321-1ubuntu1 [26.3 kB] Get:104 http://ftpmaster.internal/ubuntu focal/main amd64 libatomic1 amd64 10-20200321-1ubuntu1 [9296 B] Get:105 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libasan5 amd64 9.3.0-7ubuntu1 [395 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main amd64 liblsan0 amd64 10-20200321-1ubuntu1 [144 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main amd64 libtsan0 amd64 10-20200321-1ubuntu1 [319 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main amd64 libubsan1 amd64 10-20200321-1ubuntu1 [136 kB] Get:109 http://ftpmaster.internal/ubuntu focal/main amd64 libquadmath0 amd64 10-20200321-1ubuntu1 [146 kB] Get:110 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 g++-9 amd64 9.3.0-7ubuntu1 [8398 kB] Get:111 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libstdc++-9-dev amd64 9.3.0-7ubuntu1 [1710 kB] Get:112 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gcc-9 amd64 9.3.0-7ubuntu1 [8234 kB] Get:113 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libgcc-9-dev amd64 9.3.0-7ubuntu1 [2353 kB] Get:114 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 cpp-9 amd64 9.3.0-7ubuntu1 [7490 kB] Get:115 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gcc-9-base amd64 9.3.0-7ubuntu1 [19.2 kB] Get:116 http://ftpmaster.internal/ubuntu focal/main amd64 libcom-err2 amd64 1.45.5-2ubuntu1 [9544 B] Get:117 http://ftpmaster.internal/ubuntu focal/main amd64 libprocps8 amd64 2:3.3.16-1ubuntu2 [33.1 kB] Get:118 http://ftpmaster.internal/ubuntu focal/main amd64 libss2 amd64 1.45.5-2ubuntu1 [11.3 kB] Get:119 http://ftpmaster.internal/ubuntu focal/main amd64 mawk amd64 1.3.4.20200120-2 [96.0 kB] Get:120 http://ftpmaster.internal/ubuntu focal/main amd64 procps amd64 2:3.3.16-1ubuntu2 [233 kB] Get:121 http://ftpmaster.internal/ubuntu focal/main amd64 sensible-utils all 0.0.12+nmu1 [15.0 kB] Get:122 http://ftpmaster.internal/ubuntu focal/main amd64 readline-common all 8.0-4 [53.5 kB] Get:123 http://ftpmaster.internal/ubuntu focal/main amd64 libreadline8 amd64 8.0-4 [131 kB] Get:124 http://ftpmaster.internal/ubuntu focal/main amd64 libsqlite3-0 amd64 3.31.1-3 [548 kB] Get:125 http://ftpmaster.internal/ubuntu focal/main amd64 openssl amd64 1.1.1d-2ubuntu6 [620 kB] Get:126 http://ftpmaster.internal/ubuntu focal/main amd64 tzdata all 2019c-3ubuntu1 [294 kB] Get:127 http://ftpmaster.internal/ubuntu focal/main amd64 libpng16-16 amd64 1.6.37-2 [179 kB] Get:128 http://ftpmaster.internal/ubuntu focal/main amd64 advancecomp amd64 2.1-2.1build1 [201 kB] Get:129 http://ftpmaster.internal/ubuntu focal/main amd64 libassuan0 amd64 2.5.3-7ubuntu2 [35.7 kB] Get:130 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 pinentry-curses amd64 1.1.0-3build1 [36.3 kB] Get:131 http://ftpmaster.internal/ubuntu focal/main amd64 gpg amd64 2.2.19-3ubuntu2 [482 kB] Get:132 http://ftpmaster.internal/ubuntu focal/main amd64 gpgconf amd64 2.2.19-3ubuntu2 [124 kB] Get:133 http://ftpmaster.internal/ubuntu focal/main amd64 gpg-agent amd64 2.2.19-3ubuntu2 [232 kB] Get:134 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile-bin amd64 1.16-1.1 [11.7 kB] Get:135 http://ftpmaster.internal/ubuntu focal/main amd64 liblockfile1 amd64 1.16-1.1 [6680 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 71.3 MB in 4s (16.5 MB/s) Selecting previously unselected package gcc-10-base:amd64. (Reading database ... 12741 files and directories currently installed.) Preparing to unpack .../gcc-10-base_10-20200321-1ubuntu1_amd64.deb ... Unpacking gcc-10-base:amd64 (10-20200321-1ubuntu1) ... Setting up gcc-10-base:amd64 (10-20200321-1ubuntu1) ... Selecting previously unselected package libgcc-s1:amd64. (Reading database ... 12747 files and directories currently installed.) Preparing to unpack .../libgcc-s1_10-20200321-1ubuntu1_amd64.deb ... Unpacking libgcc-s1:amd64 (10-20200321-1ubuntu1) ... Replacing files in old package libgcc1:amd64 (1:9.2.1-9ubuntu2) ... Setting up libgcc-s1:amd64 (10-20200321-1ubuntu1) ... (Reading database ... 12749 files and directories currently installed.) Preparing to unpack .../0-libc6-dev_2.31-0ubuntu6_amd64.deb ... Unpacking libc6-dev:amd64 (2.31-0ubuntu6) over (2.30-0ubuntu2) ... Preparing to unpack .../1-libc-dev-bin_2.31-0ubuntu6_amd64.deb ... Unpacking libc-dev-bin (2.31-0ubuntu6) over (2.30-0ubuntu2) ... 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Setting up tzdata (2019c-3ubuntu1) ... Current default time zone: 'Etc/UTC' Local time is now: Mon Mar 23 06:53:47 UTC 2020. Universal Time is now: Mon Mar 23 06:53:47 UTC 2020. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libasan5:amd64 (9.3.0-7ubuntu1) ... Setting up libncurses6:amd64 (6.2-0ubuntu2) ... Setting up libquadmath0:amd64 (10-20200321-1ubuntu1) ... Setting up libpng16-16:amd64 (1.6.37-2) ... Setting up libatomic1:amd64 (10-20200321-1ubuntu1) ... Setting up libss2:amd64 (1.45.5-2ubuntu1) ... Setting up logsave (1.45.5-2ubuntu1) ... Setting up libubsan1:amd64 (10-20200321-1ubuntu1) ... Setting up advancecomp (2.1-2.1build1) ... Setting up libdevmapper1.02.1:amd64 (2:1.02.167-1ubuntu1) ... Setting up mount (2.34-0.1ubuntu8) ... Setting up sensible-utils (0.0.12+nmu1) ... Setting up libcrypt-dev:amd64 (1:4.4.10-10ubuntu4) ... Setting up libperl5.30:amd64 (5.30.0-9build1) ... Setting up libisl22:amd64 (0.22.1-1) ... Setting up mawk (1.3.4.20200120-2) ... 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Setting up libstdc++-9-dev:amd64 (9.3.0-7ubuntu1) ... Setting up systemd (245.2-1ubuntu1) ... Installing new version of config file /etc/dhcp/dhclient-enter-hooks.d/resolved ... Installing new version of config file /etc/systemd/networkd.conf ... Installing new version of config file /etc/systemd/system.conf ... Installing new version of config file /etc/systemd/user.conf ... Initializing machine ID from KVM UUID. Setting up binutils (2.34-5ubuntu1) ... Setting up gcc-9 (9.3.0-7ubuntu1) ... Setting up systemd-sysv (245.2-1ubuntu1) ... Setting up g++-9 (9.3.0-7ubuntu1) ... Processing triggers for libc-bin (2.31-0ubuntu6) ... RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-18878160 amd64 focal-proposed -c chroot:build-PACKAGEBUILD-18878160 --arch=amd64 --dist=focal-proposed --nolog -A cmtk_3.3.1p1+dfsg-2build1.dsc Initiating build PACKAGEBUILD-18878160 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-176-generic #206-Ubuntu SMP Fri Feb 28 05:02:04 UTC 2020 x86_64 sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on lgw01-amd64-010.buildd +==============================================================================+ | cmtk 3.3.1p1+dfsg-2build1 (amd64) 23 Mar 2020 06:53 | +==============================================================================+ Package: cmtk Version: 3.3.1p1+dfsg-2build1 Source Version: 3.3.1p1+dfsg-2build1 Distribution: focal-proposed Machine Architecture: amd64 Host Architecture: amd64 Build Architecture: amd64 I: NOTICE: Log filtering will replace 'build/cmtk-qFCV18/cmtk-3.3.1p1+dfsg' with '<>' I: NOTICE: Log filtering will replace 'build/cmtk-qFCV18' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-18878160/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- cmtk_3.3.1p1+dfsg-2build1.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-GU07f5/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-GU07f5/apt_archive ./ InRelease Get:2 copy:/<>/resolver-GU07f5/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-GU07f5/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-GU07f5/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-GU07f5/apt_archive ./ Packages [527 B] Fetched 2860 B in 0s (101 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-GU07f5/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 0s (78.2 kB/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 14763 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_amd64.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth Filtered Build-Depends: debhelper-compat (= 12), cmake, libmxml-dev, libsqlite3-dev, zlib1g-dev | libz-dev, libdcmtk-dev | libdcmtk2-dev | libdcmtk1-dev, libbz2-dev, libfftw3-dev, liblzma-dev, libpng-dev, libtiff-dev | libtiff4-dev, libwrap0-dev, libcharls-dev | libdcmtk1-dev, libxml2-dev, libssl-dev, xvfb, bc, dc, xauth dpkg-deb: building package 'sbuild-build-depends-cmtk-dummy' in '/<>/resolver-ths_WX/apt_archive/sbuild-build-depends-cmtk-dummy.deb'. Ign:1 copy:/<>/resolver-ths_WX/apt_archive ./ InRelease Get:2 copy:/<>/resolver-ths_WX/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-ths_WX/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-ths_WX/apt_archive ./ Sources [320 B] Get:5 copy:/<>/resolver-ths_WX/apt_archive ./ Packages [638 B] Fetched 3077 B in 0s (44.6 kB/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install cmtk build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: libffi6 libhogweed4 libisl21 libnettle6 libperl5.28 perl-modules-5.28 Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data dc debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libasn1-8-heimdal libbrotli1 libbsd0 libbz2-dev libcharls-dev libcharls2 libcroco3 libcurl4 libdcmtk-dev libdcmtk14 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontenc1 libfreetype6 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu66 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libllvm9 liblzma-dev libmagic-mgc libmagic1 libmxml-dev libmxml1 libnghttp2-14 libpciaccess0 libpipeline1 libpixman-1-0 libpng-dev libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm6 libsqlite3-dev libssh-4 libssl-dev libsub-override-perl libtiff-dev libtiff5 libtiffxx5 libtool libuchardet0 libunwind8 libuv1 libvulkan1 libwebp6 libwind0-heimdal libwrap0 libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1 libxpm4 libxshmfence1 libxt6 libxxf86vm1 m4 man-db po-debconf x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation cmake-doc ninja-build dh-make gettext-doc libasprintf-dev libgettextpo-dev groff lrzip dcmtk-doc libfftw3-doc krb5-doc krb5-user icu-doc liblzma-doc pciutils lm-sensors sqlite3-doc libssl-doc libtool-doc gfortran | fortran95-compiler gcj-jdk pkg-config m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx bzip2-doc libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs krb5-locales libmxml-bin libpng-tools publicsuffix libsasl2-modules libltdl-dev mesa-vulkan-drivers | vulkan-icd libmail-sendmail-perl xfonts-base The following NEW packages will be installed: autoconf automake autopoint autotools-dev bc bsdmainutils cmake cmake-data dc debhelper dh-autoreconf dh-strip-nondeterminism dwz file gettext gettext-base groff-base icu-devtools intltool-debian libarchive-zip-perl libarchive13 libasn1-8-heimdal libbrotli1 libbsd0 libbz2-dev libcharls-dev libcharls2 libcroco3 libcurl4 libdcmtk-dev libdcmtk14 libdebhelper-perl libdrm-amdgpu1 libdrm-common libdrm-intel1 libdrm-nouveau2 libdrm-radeon1 libdrm2 libedit2 libelf1 libexpat1 libfftw3-bin libfftw3-dev libfftw3-double3 libfftw3-long3 libfftw3-quad3 libfftw3-single3 libfile-stripnondeterminism-perl libfontenc1 libfreetype6 libgl1 libgl1-mesa-dri libglapi-mesa libglib2.0-0 libglvnd0 libglx-mesa0 libglx0 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhx509-5-heimdal libice6 libicu-dev libicu66 libjbig-dev libjbig0 libjpeg-dev libjpeg-turbo8 libjpeg-turbo8-dev libjpeg8 libjpeg8-dev libjsoncpp1 libk5crypto3 libkeyutils1 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libldap-common libllvm9 liblzma-dev libmagic-mgc libmagic1 libmxml-dev libmxml1 libnghttp2-14 libpciaccess0 libpipeline1 libpixman-1-0 libpng-dev libpsl5 librhash0 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libsensors-config libsensors5 libsigsegv2 libsm6 libsqlite3-dev libssh-4 libssl-dev libsub-override-perl libtiff-dev libtiff5 libtiffxx5 libtool libuchardet0 libunwind8 libuv1 libvulkan1 libwebp6 libwind0-heimdal libwrap0 libwrap0-dev libx11-6 libx11-data libx11-xcb1 libxau6 libxaw7 libxcb-dri2-0 libxcb-dri3-0 libxcb-glx0 libxcb-present0 libxcb-sync1 libxcb1 libxdamage1 libxdmcp6 libxext6 libxfixes3 libxfont2 libxkbfile1 libxml2 libxml2-dev libxmu6 libxmuu1 libxpm4 libxshmfence1 libxt6 libxxf86vm1 m4 man-db po-debconf sbuild-build-depends-cmtk-dummy x11-common x11-xkb-utils xauth xkb-data xserver-common xvfb zlib1g-dev 0 upgraded, 154 newly installed, 0 to remove and 0 not upgraded. Need to get 80.3 MB of archives. After this operation, 596 MB of additional disk space will be used. Get:1 copy:/<>/resolver-ths_WX/apt_archive ./ sbuild-build-depends-cmtk-dummy 0.invalid.0 [968 B] Get:2 http://ftpmaster.internal/ubuntu focal/main amd64 libbsd0 amd64 0.10.0-1 [45.4 kB] Get:3 http://ftpmaster.internal/ubuntu focal/main amd64 bsdmainutils amd64 11.1.2ubuntu2 [181 kB] Get:4 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libuchardet0 amd64 0.0.6-3build1 [65.2 kB] Get:5 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 groff-base amd64 1.22.4-4build1 [847 kB] Get:6 http://ftpmaster.internal/ubuntu focal/main amd64 libpipeline1 amd64 1.5.2-2build1 [27.7 kB] Get:7 http://ftpmaster.internal/ubuntu focal/main amd64 man-db amd64 2.9.1-1 [1112 kB] Get:8 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic-mgc amd64 1:5.38-4 [218 kB] Get:9 http://ftpmaster.internal/ubuntu focal/main amd64 libmagic1 amd64 1:5.38-4 [75.9 kB] Get:10 http://ftpmaster.internal/ubuntu focal/main amd64 file amd64 1:5.38-4 [23.3 kB] Get:11 http://ftpmaster.internal/ubuntu focal/main amd64 libelf1 amd64 0.176-1.1build1 [44.0 kB] Get:12 http://ftpmaster.internal/ubuntu focal/main amd64 libexpat1 amd64 2.2.9-1build1 [73.3 kB] Get:13 http://ftpmaster.internal/ubuntu focal/main amd64 libglib2.0-0 amd64 2.64.1-1 [1284 kB] Get:14 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libicu66 amd64 66.1-2ubuntu2 [8520 kB] Get:15 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libxml2 amd64 2.9.10+dfsg-4build1 [640 kB] Get:16 http://ftpmaster.internal/ubuntu focal/main amd64 xkb-data all 2.29-2 [349 kB] Get:17 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gettext-base amd64 0.19.8.1-10build1 [50.2 kB] Get:18 http://ftpmaster.internal/ubuntu focal/main amd64 libdrm-common all 2.4.100-4 [5340 B] Get:19 http://ftpmaster.internal/ubuntu focal/main amd64 libdrm2 amd64 2.4.100-4 [31.8 kB] Get:20 http://ftpmaster.internal/ubuntu focal/main amd64 libedit2 amd64 3.1-20191231-1 [87.0 kB] Get:21 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5support0 amd64 1.17-6ubuntu4 [30.9 kB] Get:22 http://ftpmaster.internal/ubuntu focal/main amd64 libk5crypto3 amd64 1.17-6ubuntu4 [80.2 kB] Get:23 http://ftpmaster.internal/ubuntu focal/main amd64 libkeyutils1 amd64 1.6-6ubuntu1 [10.2 kB] Get:24 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5-3 amd64 1.17-6ubuntu4 [330 kB] Get:25 http://ftpmaster.internal/ubuntu focal/main amd64 libgssapi-krb5-2 amd64 1.17-6ubuntu4 [121 kB] Get:26 http://ftpmaster.internal/ubuntu focal/main amd64 libpsl5 amd64 0.20.2-2 [50.0 kB] Get:27 http://ftpmaster.internal/ubuntu focal/main amd64 libxau6 amd64 1:1.0.9-0ubuntu1 [7488 B] Get:28 http://ftpmaster.internal/ubuntu focal/main amd64 libxdmcp6 amd64 1:1.1.3-0ubuntu1 [10.6 kB] Get:29 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb1 amd64 1.13.1-5build1 [44.8 kB] Get:30 http://ftpmaster.internal/ubuntu focal/main amd64 libx11-data all 2:1.6.9-2ubuntu1 [113 kB] Get:31 http://ftpmaster.internal/ubuntu focal/main amd64 libx11-6 amd64 2:1.6.9-2ubuntu1 [573 kB] Get:32 http://ftpmaster.internal/ubuntu focal/main amd64 libxext6 amd64 2:1.3.4-0ubuntu1 [29.1 kB] Get:33 http://ftpmaster.internal/ubuntu focal/main amd64 libxmuu1 amd64 2:1.1.3-0ubuntu1 [9728 B] Get:34 http://ftpmaster.internal/ubuntu focal/main amd64 xauth amd64 1:1.1-0ubuntu1 [25.0 kB] Get:35 http://ftpmaster.internal/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB] Get:36 http://ftpmaster.internal/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB] Get:37 http://ftpmaster.internal/ubuntu focal/main amd64 autoconf all 2.69-11.1 [321 kB] Get:38 http://ftpmaster.internal/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB] Get:39 http://ftpmaster.internal/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu6 [522 kB] Get:40 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 autopoint all 0.19.8.1-10build1 [412 kB] Get:41 http://ftpmaster.internal/ubuntu focal/main amd64 bc amd64 1.07.1-2build1 [86.3 kB] Get:42 http://ftpmaster.internal/ubuntu focal/main amd64 cmake-data all 3.16.3-1ubuntu1 [1612 kB] Get:43 http://ftpmaster.internal/ubuntu focal/main amd64 libarchive13 amd64 3.4.0-1ubuntu2 [327 kB] Get:44 http://ftpmaster.internal/ubuntu focal/main amd64 libbrotli1 amd64 1.0.7-6build1 [270 kB] Get:45 http://ftpmaster.internal/ubuntu focal/main amd64 libroken18-heimdal amd64 7.7.0+dfsg-1 [41.9 kB] Get:46 http://ftpmaster.internal/ubuntu focal/main amd64 libasn1-8-heimdal amd64 7.7.0+dfsg-1 [181 kB] Get:47 http://ftpmaster.internal/ubuntu focal/main amd64 libheimbase1-heimdal amd64 7.7.0+dfsg-1 [29.7 kB] Get:48 http://ftpmaster.internal/ubuntu focal/main amd64 libhcrypto4-heimdal amd64 7.7.0+dfsg-1 [87.8 kB] Get:49 http://ftpmaster.internal/ubuntu focal/main amd64 libwind0-heimdal amd64 7.7.0+dfsg-1 [47.9 kB] Get:50 http://ftpmaster.internal/ubuntu focal/main amd64 libhx509-5-heimdal amd64 7.7.0+dfsg-1 [107 kB] Get:51 http://ftpmaster.internal/ubuntu focal/main amd64 libkrb5-26-heimdal amd64 7.7.0+dfsg-1 [207 kB] Get:52 http://ftpmaster.internal/ubuntu focal/main amd64 libheimntlm0-heimdal amd64 7.7.0+dfsg-1 [15.1 kB] Get:53 http://ftpmaster.internal/ubuntu focal/main amd64 libgssapi3-heimdal amd64 7.7.0+dfsg-1 [96.6 kB] Get:54 http://ftpmaster.internal/ubuntu focal/main amd64 libsasl2-modules-db amd64 2.1.27+dfsg-2 [14.9 kB] Get:55 http://ftpmaster.internal/ubuntu focal/main amd64 libsasl2-2 amd64 2.1.27+dfsg-2 [49.3 kB] Get:56 http://ftpmaster.internal/ubuntu focal/main amd64 libldap-common all 2.4.49+dfsg-2ubuntu1 [17.3 kB] Get:57 http://ftpmaster.internal/ubuntu focal/main amd64 libldap-2.4-2 amd64 2.4.49+dfsg-2ubuntu1 [156 kB] Get:58 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libnghttp2-14 amd64 1.40.0-1build1 [78.7 kB] Get:59 http://ftpmaster.internal/ubuntu focal/main amd64 librtmp1 amd64 2.4+20151223.gitfa8646d.1-2build1 [54.9 kB] Get:60 http://ftpmaster.internal/ubuntu focal/main amd64 libssh-4 amd64 0.9.3-2ubuntu1 [170 kB] Get:61 http://ftpmaster.internal/ubuntu focal/main amd64 libcurl4 amd64 7.68.0-1ubuntu1 [233 kB] Get:62 http://ftpmaster.internal/ubuntu focal/main amd64 libjsoncpp1 amd64 1.7.4-3.1ubuntu2 [75.6 kB] Get:63 http://ftpmaster.internal/ubuntu focal/main amd64 librhash0 amd64 1.3.9-1 [113 kB] Get:64 http://ftpmaster.internal/ubuntu focal/main amd64 libuv1 amd64 1.34.2-1ubuntu1 [80.4 kB] Get:65 http://ftpmaster.internal/ubuntu focal/main amd64 cmake amd64 3.16.3-1ubuntu1 [3669 kB] Get:66 http://ftpmaster.internal/ubuntu focal/main amd64 dc amd64 1.07.1-2build1 [48.7 kB] Get:67 http://ftpmaster.internal/ubuntu focal/main amd64 libtool all 2.4.6-13 [161 kB] Get:68 http://ftpmaster.internal/ubuntu focal/main amd64 dh-autoreconf all 19 [16.1 kB] Get:69 http://ftpmaster.internal/ubuntu focal/main amd64 libdebhelper-perl all 12.9ubuntu1 [62.0 kB] Get:70 http://ftpmaster.internal/ubuntu focal/main amd64 libarchive-zip-perl all 1.67-2 [90.5 kB] Get:71 http://ftpmaster.internal/ubuntu focal/main amd64 libsub-override-perl all 0.09-2 [9532 B] Get:72 http://ftpmaster.internal/ubuntu focal/main amd64 libfile-stripnondeterminism-perl all 1.6.3-2 [16.0 kB] Get:73 http://ftpmaster.internal/ubuntu focal/main amd64 dh-strip-nondeterminism all 1.6.3-2 [5228 B] Get:74 http://ftpmaster.internal/ubuntu focal/main amd64 dwz amd64 0.13-5 [151 kB] Get:75 http://ftpmaster.internal/ubuntu focal/main amd64 libcroco3 amd64 0.6.13-1 [82.5 kB] Get:76 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 gettext amd64 0.19.8.1-10build1 [895 kB] Get:77 http://ftpmaster.internal/ubuntu focal/main amd64 intltool-debian all 0.35.0+20060710.5 [24.9 kB] Get:78 http://ftpmaster.internal/ubuntu focal/main amd64 po-debconf all 1.0.21 [233 kB] Get:79 http://ftpmaster.internal/ubuntu focal/main amd64 debhelper all 12.9ubuntu1 [869 kB] Get:80 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 icu-devtools amd64 66.1-2ubuntu2 [188 kB] Get:81 http://ftpmaster.internal/ubuntu focal/main amd64 libbz2-dev amd64 1.0.8-2 [30.2 kB] Get:82 http://ftpmaster.internal/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1 [64.4 kB] Get:83 http://ftpmaster.internal/ubuntu focal/universe amd64 libcharls-dev amd64 2.0.0+dfsg-1 [6548 B] Get:84 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libicu-dev amd64 66.1-2ubuntu2 [9450 kB] Get:85 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libxml2-dev amd64 2.9.10+dfsg-4build1 [736 kB] Get:86 http://ftpmaster.internal/ubuntu focal/main amd64 libssl-dev amd64 1.1.1d-2ubuntu6 [1582 kB] Get:87 http://ftpmaster.internal/ubuntu focal/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1 [156 kB] Get:88 http://ftpmaster.internal/ubuntu focal/main amd64 libpng-dev amd64 1.6.37-2 [175 kB] Get:89 http://ftpmaster.internal/ubuntu focal/main amd64 libwrap0 amd64 7.6.q-30 [46.3 kB] Get:90 http://ftpmaster.internal/ubuntu focal/main amd64 libwrap0-dev amd64 7.6.q-30 [21.7 kB] Get:91 http://ftpmaster.internal/ubuntu focal/main amd64 libjbig0 amd64 2.1-3.1build1 [26.7 kB] Get:92 http://ftpmaster.internal/ubuntu focal/main amd64 libjbig-dev amd64 2.1-3.1build1 [25.2 kB] Get:93 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg-turbo8 amd64 2.0.3-0ubuntu1 [118 kB] Get:94 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg-turbo8-dev amd64 2.0.3-0ubuntu1 [238 kB] Get:95 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg8 amd64 8c-2ubuntu8 [2194 B] Get:96 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg8-dev amd64 8c-2ubuntu8 [1552 B] Get:97 http://ftpmaster.internal/ubuntu focal/main amd64 libjpeg-dev amd64 8c-2ubuntu8 [1546 B] Get:98 http://ftpmaster.internal/ubuntu focal/main amd64 liblzma-dev amd64 5.2.4-1 [145 kB] Get:99 http://ftpmaster.internal/ubuntu focal/main amd64 libwebp6 amd64 0.6.1-2 [185 kB] Get:100 http://ftpmaster.internal/ubuntu focal/main amd64 libtiff5 amd64 4.1.0+git191117-2build1 [161 kB] Get:101 http://ftpmaster.internal/ubuntu focal/main amd64 libtiffxx5 amd64 4.1.0+git191117-2build1 [5944 B] Get:102 http://ftpmaster.internal/ubuntu focal/main amd64 libtiff-dev amd64 4.1.0+git191117-2build1 [284 kB] Get:103 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 libdcmtk14 amd64 3.6.4-2.1build2 [4682 kB] Get:104 http://ftpmaster.internal/ubuntu focal-proposed/universe amd64 libdcmtk-dev amd64 3.6.4-2.1build2 [941 kB] Get:105 http://ftpmaster.internal/ubuntu focal/main amd64 libdrm-amdgpu1 amd64 2.4.100-4 [18.4 kB] Get:106 http://ftpmaster.internal/ubuntu focal/main amd64 libpciaccess0 amd64 0.16-0ubuntu1 [17.9 kB] Get:107 http://ftpmaster.internal/ubuntu focal/main amd64 libdrm-intel1 amd64 2.4.100-4 [60.3 kB] Get:108 http://ftpmaster.internal/ubuntu focal/main amd64 libdrm-nouveau2 amd64 2.4.100-4 [16.4 kB] Get:109 http://ftpmaster.internal/ubuntu focal/main amd64 libdrm-radeon1 amd64 2.4.100-4 [19.7 kB] Get:110 http://ftpmaster.internal/ubuntu focal/main amd64 libfftw3-double3 amd64 3.3.8-2ubuntu1 [728 kB] Get:111 http://ftpmaster.internal/ubuntu focal/main amd64 libfftw3-long3 amd64 3.3.8-2ubuntu1 [313 kB] Get:112 http://ftpmaster.internal/ubuntu focal/main amd64 libfftw3-quad3 amd64 3.3.8-2ubuntu1 [673 kB] Get:113 http://ftpmaster.internal/ubuntu focal/main amd64 libfftw3-single3 amd64 3.3.8-2ubuntu1 [756 kB] Get:114 http://ftpmaster.internal/ubuntu focal/main amd64 libfftw3-bin amd64 3.3.8-2ubuntu1 [32.2 kB] Get:115 http://ftpmaster.internal/ubuntu focal/main amd64 libfftw3-dev amd64 3.3.8-2ubuntu1 [2211 kB] Get:116 http://ftpmaster.internal/ubuntu focal/main amd64 libfontenc1 amd64 1:1.1.4-0ubuntu1 [14.0 kB] Get:117 http://ftpmaster.internal/ubuntu focal/main amd64 libfreetype6 amd64 2.10.1-2 [341 kB] Get:118 http://ftpmaster.internal/ubuntu focal/main amd64 libglapi-mesa amd64 20.0.0-1ubuntu1 [26.7 kB] Get:119 http://ftpmaster.internal/ubuntu focal/main amd64 libllvm9 amd64 1:9.0.1-10 [14.8 MB] Get:120 http://ftpmaster.internal/ubuntu focal/main amd64 libsensors-config all 1:3.6.0-2ubuntu1 [6092 B] Get:121 http://ftpmaster.internal/ubuntu focal/main amd64 libsensors5 amd64 1:3.6.0-2ubuntu1 [27.4 kB] Get:122 http://ftpmaster.internal/ubuntu focal/main amd64 libvulkan1 amd64 1.2.131.2-1 [93.3 kB] Get:123 http://ftpmaster.internal/ubuntu focal/main amd64 libgl1-mesa-dri amd64 20.0.0-1ubuntu1 [9445 kB] Get:124 http://ftpmaster.internal/ubuntu focal/main amd64 libx11-xcb1 amd64 2:1.6.9-2ubuntu1 [9156 B] Get:125 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-dri2-0 amd64 1.13.1-5build1 [6916 B] Get:126 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-dri3-0 amd64 1.13.1-5build1 [6556 B] Get:127 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-glx0 amd64 1.13.1-5build1 [22.0 kB] Get:128 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-present0 amd64 1.13.1-5build1 [5560 B] Get:129 http://ftpmaster.internal/ubuntu focal/main amd64 libxcb-sync1 amd64 1.13.1-5build1 [8892 B] Get:130 http://ftpmaster.internal/ubuntu focal/main amd64 libxdamage1 amd64 1:1.1.5-1 [7028 B] Get:131 http://ftpmaster.internal/ubuntu focal/main amd64 libxfixes3 amd64 1:5.0.3-1 [10.8 kB] Get:132 http://ftpmaster.internal/ubuntu focal/main amd64 libxshmfence1 amd64 1.3-1 [5028 B] Get:133 http://ftpmaster.internal/ubuntu focal/main amd64 libxxf86vm1 amd64 1:1.1.4-1build1 [10.2 kB] Get:134 http://ftpmaster.internal/ubuntu focal/main amd64 libglx-mesa0 amd64 20.0.0-1ubuntu1 [139 kB] Get:135 http://ftpmaster.internal/ubuntu focal/main amd64 x11-common all 1:7.7+19ubuntu14 [22.3 kB] Get:136 http://ftpmaster.internal/ubuntu focal/main amd64 libice6 amd64 2:1.0.10-0ubuntu1 [41.0 kB] Get:137 http://ftpmaster.internal/ubuntu focal/universe amd64 libmxml1 amd64 3.1-1 [23.7 kB] Get:138 http://ftpmaster.internal/ubuntu focal/universe amd64 libmxml-dev amd64 3.1-1 [1335 kB] Get:139 http://ftpmaster.internal/ubuntu focal/main amd64 libpixman-1-0 amd64 0.38.4-0ubuntu1 [227 kB] Get:140 http://ftpmaster.internal/ubuntu focal/main amd64 libsm6 amd64 2:1.2.3-1 [16.1 kB] Get:141 http://ftpmaster.internal/ubuntu focal/main amd64 libsqlite3-dev amd64 3.31.1-3 [696 kB] Get:142 http://ftpmaster.internal/ubuntu focal-proposed/main amd64 libunwind8 amd64 1.2.1-9build1 [47.6 kB] Get:143 http://ftpmaster.internal/ubuntu focal/main amd64 libxt6 amd64 1:1.1.5-1 [160 kB] Get:144 http://ftpmaster.internal/ubuntu focal/main amd64 libxmu6 amd64 2:1.1.3-0ubuntu1 [45.8 kB] Get:145 http://ftpmaster.internal/ubuntu focal/main amd64 libxpm4 amd64 1:3.5.12-1 [34.0 kB] Get:146 http://ftpmaster.internal/ubuntu focal/main amd64 libxaw7 amd64 2:1.0.13-1 [173 kB] Get:147 http://ftpmaster.internal/ubuntu focal/main amd64 libxfont2 amd64 1:2.0.3-1 [91.7 kB] Get:148 http://ftpmaster.internal/ubuntu focal/main amd64 libxkbfile1 amd64 1:1.1.0-1 [65.3 kB] Get:149 http://ftpmaster.internal/ubuntu focal/main amd64 x11-xkb-utils amd64 7.7+5 [158 kB] Get:150 http://ftpmaster.internal/ubuntu focal/main amd64 xserver-common all 2:1.20.7-2ubuntu2 [27.0 kB] Get:151 http://ftpmaster.internal/ubuntu focal/main amd64 libglvnd0 amd64 1.3.1-1 [52.4 kB] Get:152 http://ftpmaster.internal/ubuntu focal/main amd64 libglx0 amd64 1.3.1-1 [32.6 kB] Get:153 http://ftpmaster.internal/ubuntu focal/main amd64 libgl1 amd64 1.3.1-1 [87.5 kB] Get:154 http://ftpmaster.internal/ubuntu focal/universe amd64 xvfb amd64 2:1.20.7-2ubuntu2 [778 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 80.3 MB in 8s (9595 kB/s) Selecting previously unselected package libbsd0:amd64. 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Setting up libxcb-present0:amd64 (1.13.1-5build1) ... Setting up libwind0-heimdal:amd64 (7.7.0+dfsg-1) ... Setting up libxml2-dev:amd64 (2.9.10+dfsg-4build1) ... Setting up libxcb-sync1:amd64 (1.13.1-5build1) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libgssapi-krb5-2:amd64 (1.17-6ubuntu4) ... Setting up libcroco3:amd64 (0.6.13-1) ... Setting up libssh-4:amd64 (0.9.3-2ubuntu1) ... Setting up autoconf (2.69-11.1) ... Setting up libxcb-dri2-0:amd64 (1.13.1-5build1) ... Setting up dh-strip-nondeterminism (1.6.3-2) ... Setting up libdrm2:amd64 (2.4.100-4) ... Setting up dwz (0.13-5) ... Setting up groff-base (1.22.4-4build1) ... Setting up libx11-6:amd64 (2:1.6.9-2ubuntu1) ... Setting up libtiff5:amd64 (4.1.0+git191117-2build1) ... Setting up libxkbfile1:amd64 (1:1.1.0-1) ... Setting up libjpeg8-dev:amd64 (8c-2ubuntu8) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up libfftw3-dev:amd64 (3.3.8-2ubuntu1) ... Setting up libllvm9:amd64 (1:9.0.1-10) ... Setting up libxmuu1:amd64 (2:1.1.3-0ubuntu1) ... Setting up libtiffxx5:amd64 (4.1.0+git191117-2build1) ... Setting up libdrm-amdgpu1:amd64 (2.4.100-4) ... Setting up automake (1:1.16.1-4ubuntu6) ... update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode Setting up libxcb-dri3-0:amd64 (1.13.1-5build1) ... Setting up libdrm-nouveau2:amd64 (2.4.100-4) ... Setting up gettext (0.19.8.1-10build1) ... Setting up libdcmtk14 (3.6.4-2.1build2) ... Setting up libxdamage1:amd64 (1:1.1.5-1) ... Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libdrm-radeon1:amd64 (2.4.100-4) ... Setting up libhx509-5-heimdal:amd64 (7.7.0+dfsg-1) ... Setting up libdrm-intel1:amd64 (2.4.100-4) ... Setting up libgl1-mesa-dri:amd64 (20.0.0-1ubuntu1) ... Setting up libjpeg-dev:amd64 (8c-2ubuntu8) ... Setting up libxext6:amd64 (2:1.3.4-0ubuntu1) ... Setting up man-db (2.9.1-1) ... Not building database; man-db/auto-update is not 'true'. Created symlink /etc/systemd/system/timers.target.wants/man-db.timer → /lib/systemd/system/man-db.timer. Setting up libxxf86vm1:amd64 (1:1.1.4-1build1) ... Setting up intltool-debian (0.35.0+20060710.5) ... Setting up libtiff-dev:amd64 (4.1.0+git191117-2build1) ... Setting up libxfixes3:amd64 (1:5.0.3-1) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up xauth (1:1.1-0ubuntu1) ... Setting up libkrb5-26-heimdal:amd64 (7.7.0+dfsg-1) ... Setting up libxmu6:amd64 (2:1.1.3-0ubuntu1) ... Setting up libglx-mesa0:amd64 (20.0.0-1ubuntu1) ... Setting up libglx0:amd64 (1.3.1-1) ... Setting up libdcmtk-dev (3.6.4-2.1build2) ... Setting up po-debconf (1.0.21) ... Setting up libxaw7:amd64 (2:1.0.13-1) ... Setting up libheimntlm0-heimdal:amd64 (7.7.0+dfsg-1) ... Setting up libgl1:amd64 (1.3.1-1) ... 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Processing triggers for systemd (245.2-1ubuntu1) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-176-generic amd64 (x86_64) Toolchain package versions: binutils_2.34-5ubuntu1 dpkg-dev_1.19.7ubuntu2 g++-9_9.3.0-7ubuntu1 gcc-9_9.3.0-7ubuntu1 libc6-dev_2.31-0ubuntu6 libstdc++-9-dev_9.3.0-7ubuntu1 libstdc++6_10-20200321-1ubuntu1 linux-libc-dev_5.4.0-18.22 Package versions: adduser_3.118ubuntu1 advancecomp_2.1-2.1build1 apt_2.0.0 autoconf_2.69-11.1 automake_1:1.16.1-4ubuntu6 autopoint_0.19.8.1-10build1 autotools-dev_20180224.1 base-files_11ubuntu4 base-passwd_3.5.47 bash_5.0-6ubuntu1 bc_1.07.1-2build1 binutils_2.34-5ubuntu1 binutils-common_2.34-5ubuntu1 binutils-x86-64-linux-gnu_2.34-5ubuntu1 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.34-0.1ubuntu8 build-essential_12.8ubuntu1 bzip2_1.0.8-2 ca-certificates_20190110 cmake_3.16.3-1ubuntu1 cmake-data_3.16.3-1ubuntu1 coreutils_8.30-3ubuntu2 cpp_4:9.2.1-3.1ubuntu1 cpp-9_9.3.0-7ubuntu1 dash_0.5.10.2-6 dc_1.07.1-2build1 debconf_1.5.73 debhelper_12.9ubuntu1 debianutils_4.9.1 dh-autoreconf_19 dh-strip-nondeterminism_1.6.3-2 diffutils_1:3.7-3 dpkg_1.19.7ubuntu2 dpkg-dev_1.19.7ubuntu2 dwz_0.13-5 e2fsprogs_1.45.5-2ubuntu1 fakeroot_1.24-1 fdisk_2.34-0.1ubuntu8 file_1:5.38-4 findutils_4.7.0-1ubuntu1 g++_4:9.2.1-3.1ubuntu1 g++-9_9.3.0-7ubuntu1 gcc_4:9.2.1-3.1ubuntu1 gcc-10-base_10-20200321-1ubuntu1 gcc-9_9.3.0-7ubuntu1 gcc-9-base_9.3.0-7ubuntu1 gettext_0.19.8.1-10build1 gettext-base_0.19.8.1-10build1 gpg_2.2.19-3ubuntu2 gpg-agent_2.2.19-3ubuntu2 gpgconf_2.2.19-3ubuntu2 gpgv_2.2.19-3ubuntu2 grep_3.4-1 groff-base_1.22.4-4build1 gzip_1.10-0ubuntu4 hostname_3.23 icu-devtools_66.1-2ubuntu2 init_1.57 init-system-helpers_1.57 intltool-debian_0.35.0+20060710.5 libacl1_2.2.53-6 libapparmor1_2.13.3-7ubuntu2 libapt-pkg5.90_1.9.10 libapt-pkg6.0_2.0.0 libarchive-zip-perl_1.67-2 libarchive13_3.4.0-1ubuntu2 libargon2-1_0~20171227-0.2 libasan5_9.3.0-7ubuntu1 libasn1-8-heimdal_7.7.0+dfsg-1 libassuan0_2.5.3-7ubuntu2 libatomic1_10-20200321-1ubuntu1 libattr1_1:2.4.48-5 libaudit-common_1:2.8.5-2ubuntu6 libaudit1_1:2.8.5-2ubuntu6 libbinutils_2.34-5ubuntu1 libblkid1_2.34-0.1ubuntu8 libbrotli1_1.0.7-6build1 libbsd0_0.10.0-1 libbz2-1.0_1.0.8-2 libbz2-dev_1.0.8-2 libc-bin_2.31-0ubuntu6 libc-dev-bin_2.31-0ubuntu6 libc6_2.31-0ubuntu6 libc6-dev_2.31-0ubuntu6 libcap-ng0_0.7.9-2.1build1 libcap2_1:2.32-1 libcc1-0_10-20200321-1ubuntu1 libcharls-dev_2.0.0+dfsg-1 libcharls2_2.0.0+dfsg-1 libcom-err2_1.45.5-2ubuntu1 libcroco3_0.6.13-1 libcrypt-dev_1:4.4.10-10ubuntu4 libcrypt1_1:4.4.10-10ubuntu4 libcryptsetup12_2:2.2.2-3ubuntu2 libctf-nobfd0_2.34-5ubuntu1 libctf0_2.34-5ubuntu1 libcurl4_7.68.0-1ubuntu1 libdb5.3_5.3.28+dfsg1-0.6ubuntu2 libdcmtk-dev_3.6.4-2.1build2 libdcmtk14_3.6.4-2.1build2 libdebconfclient0_0.251ubuntu1 libdebhelper-perl_12.9ubuntu1 libdevmapper1.02.1_2:1.02.167-1ubuntu1 libdpkg-perl_1.19.7ubuntu2 libdrm-amdgpu1_2.4.100-4 libdrm-common_2.4.100-4 libdrm-intel1_2.4.100-4 libdrm-nouveau2_2.4.100-4 libdrm-radeon1_2.4.100-4 libdrm2_2.4.100-4 libedit2_3.1-20191231-1 libelf1_0.176-1.1build1 libexpat1_2.2.9-1build1 libext2fs2_1.45.5-2ubuntu1 libfakeroot_1.24-1 libfdisk1_2.34-0.1ubuntu8 libffi6_3.2.1-9 libffi7_3.3-3build1 libfftw3-bin_3.3.8-2ubuntu1 libfftw3-dev_3.3.8-2ubuntu1 libfftw3-double3_3.3.8-2ubuntu1 libfftw3-long3_3.3.8-2ubuntu1 libfftw3-quad3_3.3.8-2ubuntu1 libfftw3-single3_3.3.8-2ubuntu1 libfile-stripnondeterminism-perl_1.6.3-2 libfontenc1_1:1.1.4-0ubuntu1 libfreetype6_2.10.1-2 libgcc-9-dev_9.3.0-7ubuntu1 libgcc-s1_10-20200321-1ubuntu1 libgcc1_1:10-20200321-1ubuntu1 libgcrypt20_1.8.5-5ubuntu1 libgdbm-compat4_1.18.1-5 libgdbm6_1.18.1-5 libgl1_1.3.1-1 libgl1-mesa-dri_20.0.0-1ubuntu1 libglapi-mesa_20.0.0-1ubuntu1 libglib2.0-0_2.64.1-1 libglvnd0_1.3.1-1 libglx-mesa0_20.0.0-1ubuntu1 libglx0_1.3.1-1 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libllvm9_1:9.0.1-10 liblockfile-bin_1.16-1.1 liblockfile1_1.16-1.1 liblsan0_10-20200321-1ubuntu1 liblz4-1_1.9.2-2 liblzma-dev_5.2.4-1 liblzma5_5.2.4-1 libmagic-mgc_1:5.38-4 libmagic1_1:5.38-4 libmount1_2.34-0.1ubuntu8 libmpc3_1.1.0-1 libmpfr6_4.0.2-1 libmxml-dev_3.1-1 libmxml1_3.1-1 libncurses6_6.2-0ubuntu2 libncursesw6_6.2-0ubuntu2 libnettle6_3.4.1-1 libnettle7_3.5.1+really3.5.1-2 libnghttp2-14_1.40.0-1build1 libnpth0_1.6-1 libp11-kit0_0.23.20-1build1 libpam-modules_1.3.1-5ubuntu4 libpam-modules-bin_1.3.1-5ubuntu4 libpam-runtime_1.3.1-5ubuntu4 libpam0g_1.3.1-5ubuntu4 libpciaccess0_0.16-0ubuntu1 libpcre2-8-0_10.34-7 libpcre3_2:8.39-12build1 libperl5.28_5.28.1-6build1 libperl5.30_5.30.0-9build1 libpipeline1_1.5.2-2build1 libpixman-1-0_0.38.4-0ubuntu1 libpng-dev_1.6.37-2 libpng16-16_1.6.37-2 libprocps7_2:3.3.15-2ubuntu3 libprocps8_2:3.3.16-1ubuntu2 libpsl5_0.20.2-2 libquadmath0_10-20200321-1ubuntu1 libreadline8_8.0-4 librhash0_1.3.9-1 libroken18-heimdal_7.7.0+dfsg-1 librtmp1_2.4+20151223.gitfa8646d.1-2build1 libsasl2-2_2.1.27+dfsg-2 libsasl2-modules-db_2.1.27+dfsg-2 libseccomp2_2.4.3-0ubuntu2 libselinux1_3.0-1build2 libsemanage-common_3.0-1build2 libsemanage1_3.0-1build2 libsensors-config_1:3.6.0-2ubuntu1 libsensors5_1:3.6.0-2ubuntu1 libsepol1_3.0-1 libsigsegv2_2.12-2 libsm6_2:1.2.3-1 libsmartcols1_2.34-0.1ubuntu8 libsqlite3-0_3.31.1-3 libsqlite3-dev_3.31.1-3 libss2_1.45.5-2ubuntu1 libssh-4_0.9.3-2ubuntu1 libssl-dev_1.1.1d-2ubuntu6 libssl1.1_1.1.1d-2ubuntu6 libstdc++-9-dev_9.3.0-7ubuntu1 libstdc++6_10-20200321-1ubuntu1 libsub-override-perl_0.09-2 libsystemd0_245.2-1ubuntu1 libtasn1-6_4.16.0-2 libtiff-dev_4.1.0+git191117-2build1 libtiff5_4.1.0+git191117-2build1 libtiffxx5_4.1.0+git191117-2build1 libtinfo6_6.2-0ubuntu2 libtool_2.4.6-13 libtsan0_10-20200321-1ubuntu1 libubsan1_10-20200321-1ubuntu1 libuchardet0_0.0.6-3build1 libudev1_245.2-1ubuntu1 libunistring2_0.9.10-2 libunwind8_1.2.1-9build1 libuuid1_2.34-0.1ubuntu8 libuv1_1.34.2-1ubuntu1 libvulkan1_1.2.131.2-1 libwebp6_0.6.1-2 libwind0-heimdal_7.7.0+dfsg-1 libwrap0_7.6.q-30 libwrap0-dev_7.6.q-30 libx11-6_2:1.6.9-2ubuntu1 libx11-data_2:1.6.9-2ubuntu1 libx11-xcb1_2:1.6.9-2ubuntu1 libxau6_1:1.0.9-0ubuntu1 libxaw7_2:1.0.13-1 libxcb-dri2-0_1.13.1-5build1 libxcb-dri3-0_1.13.1-5build1 libxcb-glx0_1.13.1-5build1 libxcb-present0_1.13.1-5build1 libxcb-sync1_1.13.1-5build1 libxcb1_1.13.1-5build1 libxdamage1_1:1.1.5-1 libxdmcp6_1:1.1.3-0ubuntu1 libxext6_2:1.3.4-0ubuntu1 libxfixes3_1:5.0.3-1 libxfont2_1:2.0.3-1 libxkbfile1_1:1.1.0-1 libxml2_2.9.10+dfsg-4build1 libxml2-dev_2.9.10+dfsg-4build1 libxmu6_2:1.1.3-0ubuntu1 libxmuu1_2:1.1.3-0ubuntu1 libxpm4_1:3.5.12-1 libxshmfence1_1.3-1 libxt6_1:1.1.5-1 libxxf86vm1_1:1.1.4-1build1 libzstd1_1.4.4+dfsg-3 linux-libc-dev_5.4.0-18.22 lockfile-progs_0.1.18 login_1:4.8.1-1ubuntu3 logsave_1.45.5-2ubuntu1 lsb-base_11.1.0ubuntu2 m4_1.4.18-4 make_4.2.1-1.2 man-db_2.9.1-1 mawk_1.3.4.20200120-2 mount_2.34-0.1ubuntu8 ncurses-base_6.2-0ubuntu2 ncurses-bin_6.2-0ubuntu2 openssl_1.1.1d-2ubuntu6 optipng_0.7.7-1 passwd_1:4.8.1-1ubuntu3 patch_2.7.6-6 perl_5.30.0-9build1 perl-base_5.30.0-9build1 perl-modules-5.28_5.28.1-6build1 perl-modules-5.30_5.30.0-9build1 pinentry-curses_1.1.0-3build1 pkgbinarymangler_144 po-debconf_1.0.21 policyrcd-script-zg2_0.1-3 procps_2:3.3.16-1ubuntu2 readline-common_8.0-4 sbuild-build-depends-cmtk-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.7-1 sensible-utils_0.0.12+nmu1 systemd_245.2-1ubuntu1 systemd-sysv_245.2-1ubuntu1 sysvinit-utils_2.96-2.1ubuntu1 tar_1.30+dfsg-6 tzdata_2019c-3ubuntu1 ubuntu-keyring_2020.02.11.1 util-linux_2.34-0.1ubuntu8 x11-common_1:7.7+19ubuntu14 x11-xkb-utils_7.7+5 xauth_1:1.1-0ubuntu1 xkb-data_2.29-2 xserver-common_2:1.20.7-2ubuntu2 xvfb_2:1.20.7-2ubuntu2 xz-utils_5.2.4-1 zlib1g_1:1.2.11.dfsg-2ubuntu1 zlib1g-dev_1:1.2.11.dfsg-2ubuntu1 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Mon Mar 23 06:41:23 2020 UTC gpgv: using RSA key D56571B88A8BBAF140BF63D6BD7EAA60778FA6F5 gpgv: issuer "doko@ubuntu.com" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./cmtk_3.3.1p1+dfsg-2build1.dsc dpkg-source: info: extracting cmtk in cmtk-3.3.1p1+dfsg dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg.orig.tar.xz dpkg-source: info: unpacking cmtk_3.3.1p1+dfsg-2build1.debian.tar.xz dpkg-source: info: using patch list from debian/patches/series dpkg-source: info: applying up_assure_no_as_needed_for_checklibdep dpkg-source: info: applying reproducible_build dpkg-source: info: applying fix_cmake_version_comparison dpkg-source: info: applying dcmtk-3.6.1-compatibility Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-18878160 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-18878160 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-18878160 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package cmtk dpkg-buildpackage: info: source version 3.3.1p1+dfsg-2build1 dpkg-buildpackage: info: source distribution focal dpkg-source --before-build . dpkg-buildpackage: info: host architecture amd64 fakeroot debian/rules clean dh clean dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" debian/rules override_dh_auto_clean make[1]: Entering directory '/<>/cmtk-3.3.1p1+dfsg' dh_auto_clean rm -rf debian/manpages make[1]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg' dh_clean rm -f debian/debhelper-build-stamp rm -rf debian/.debhelper/ rm -f -- debian/cmtk.substvars debian/files rm -fr -- debian/cmtk/ debian/tmp/ find . \( \( \ \( -path .\*/.git -o -path .\*/.svn -o -path .\*/.bzr -o -path .\*/.hg -o -path .\*/CVS -o -path .\*/.pc -o -path .\*/_darcs \) -prune -o -type f -a \ \( -name '#*#' -o -name '.*~' -o -name '*~' -o -name DEADJOE \ -o -name '*.orig' -o -name '*.rej' -o -name '*.bak' \ -o -name '.*.orig' -o -name .*.rej -o -name '.SUMS' \ -o -name TAGS -o \( -path '*/.deps/*' -a -name '*.P' \) \ \) -exec rm -f {} + \) -o \ \( -type d -a -name autom4te.cache -prune -exec rm -rf {} + \) \) debian/rules build dh build dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_update_autotools_config dh_autoreconf debian/rules override_dh_auto_configure make[1]: Entering directory '/<>/cmtk-3.3.1p1+dfsg' dh_auto_configure -- \ -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON \ -DBUILD_APPS:BOOL=ON \ -DBUILD_DOCUMENTATION:BOOL=OFF \ -DBUILD_GUI:BOOL=OFF \ -DBUILD_SHARED_LIBS:BOOL=ON \ -DBUILD_TESTING:BOOL=OFF \ -DCMTK_BUILD_DCMTK:BOOL=OFF \ -DCMTK_BUILD_MXML:BOOL=OFF \ -DCMTK_BUILD_NRRD:BOOL=ON \ -DCMTK_BUILD_SQLITE:BOOL=OFF \ -DCMTK_BUILD_ZLIB:BOOL=OFF \ -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas \ -DCMTK_USE_DCMTK:BOOL=ON \ -DCMTK_USE_FFTW:BOOL=ON \ -DCMTK_USE_QT:BOOL=OFF \ -DCMTK_USE_SMP:BOOL=ON \ -DCMTK_USE_SQLITE:BOOL=ON \ -DDART_TESTING_TIMEOUT:STRING=15000 \ -DMXML_INCLUDE_DIR:PATH=/usr/include \ -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma \ -DCMAKE_SKIP_RPATH:BOOL=OFF \ -DCMTK_BUILD_WRAPPER:BOOL=ON \ install -d obj-x86_64-linux-gnu cd obj-x86_64-linux-gnu && cmake -DCMAKE_INSTALL_PREFIX=/usr -DCMAKE_BUILD_TYPE=None -DCMAKE_INSTALL_SYSCONFDIR=/etc -DCMAKE_INSTALL_LOCALSTATEDIR=/var -DCMAKE_EXPORT_NO_PACKAGE_REGISTRY=ON -DCMAKE_FIND_PACKAGE_NO_PACKAGE_REGISTRY=ON -DCMAKE_INSTALL_RUNSTATEDIR=/run "-GUnix Makefiles" -DCMAKE_VERBOSE_MAKEFILE=ON -DCMAKE_INSTALL_LIBDIR=lib/x86_64-linux-gnu -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DBUILD_APPS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=OFF -DBUILD_GUI:BOOL=OFF -DBUILD_SHARED_LIBS:BOOL=ON -DBUILD_TESTING:BOOL=OFF -DCMTK_BUILD_DCMTK:BOOL=OFF -DCMTK_BUILD_MXML:BOOL=OFF -DCMTK_BUILD_NRRD:BOOL=ON -DCMTK_BUILD_SQLITE:BOOL=OFF -DCMTK_BUILD_ZLIB:BOOL=OFF -DCMTK_ROOT_PATH_SRI24:PATH=/usr/share/data/sri24-atlas -DCMTK_USE_DCMTK:BOOL=ON -DCMTK_USE_FFTW:BOOL=ON -DCMTK_USE_QT:BOOL=OFF -DCMTK_USE_SMP:BOOL=ON -DCMTK_USE_SQLITE:BOOL=ON -DDART_TESTING_TIMEOUT:STRING=15000 -DMXML_INCLUDE_DIR:PATH=/usr/include -DLZMA_INCLUDE_DIRS:PATH=/usr/include/lzma -DCMAKE_SKIP_RPATH:BOOL=OFF -DCMTK_BUILD_WRAPPER:BOOL=ON .. -- The C compiler identification is GNU 9.3.0 -- The CXX compiler identification is GNU 9.3.0 -- Check for working C compiler: /usr/bin/cc -- Check for working C compiler: /usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /usr/bin/c++ -- Check for working CXX compiler: /usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of int -- Check size of int - done -- Check size of long -- Check size of long - done -- Check size of void* -- Check size of void* - done -- Check size of char -- Check size of char - done -- Check size of short -- Check size of short - done -- Check size of float -- Check size of float - done -- Check size of double -- Check size of double - done -- Looking for limits.h -- Looking for limits.h - found -- Looking for unistd.h -- Looking for unistd.h - found -- Looking for pthread.h -- Looking for pthread.h - found -- Looking for include files sys/types.h, sys/prctl.h -- Looking for include files sys/types.h, sys/prctl.h - found -- Check if the system is big endian -- Searching 16 bit integer -- Check size of unsigned short -- Check size of unsigned short - done -- Using unsigned short -- Check if the system is big endian - little endian -- Could NOT find X11 (missing: X11_X11_INCLUDE_PATH X11_X11_LIB) -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Looking for C++ include iostream -- Looking for C++ include iostream - found -- Check for STD namespace -- Check for STD namespace - found -- Check for ANSI scope -- Check for ANSI scope - found -- Check for sstream -- Check for sstream - found -- System is Linux-4.4.0-176-generic -- Looking for include file dirent.h -- Looking for include file dirent.h - found -- Looking for include file execinfo.h -- Looking for include file execinfo.h - found -- Looking for include file fcntl.h -- Looking for include file fcntl.h - found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - not found -- Looking for include file inttypes.h -- Looking for include file inttypes.h - found -- Looking for include file malloc.h -- Looking for include file malloc.h - found -- Looking for include file pthread.h -- Looking for include file pthread.h - found -- Looking for include file termios.h -- Looking for include file termios.h - found -- Looking for include file unistd.h -- Looking for include file unistd.h - found -- Looking for include file values.h -- Looking for include file values.h - found -- Looking for include file sys/ioctl.h -- Looking for include file sys/ioctl.h - found -- Looking for include file sys/procfs.h -- Looking for include file sys/procfs.h - found -- Looking for include file sys/stat.h -- Looking for include file sys/stat.h - found -- Looking for include file sys/time.h -- Looking for include file sys/time.h - found -- Looking for include file sys/times.h -- Looking for include file sys/times.h - found -- Looking for include file sys/utsname.h -- Looking for include file sys/utsname.h - found -- Check size of ((struct stat*)0)->st_mode -- Check size of ((struct stat*)0)->st_mode - done -- Check size of struct stat64 -- Check size of struct stat64 - failed -- Check if the system is big endian -- Searching 16 bit integer -- Using unsigned short -- Check if the system is big endian - little endian -- Check the value of the 22nd bit of a 32-bit quiet-NaN -- Check the value of the 22nd bit of a 32-bit quiet-NaN - 1 -- Looking for C++ include unordered_map -- Looking for C++ include unordered_map - found -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") -- Looking for include file dispatch/dispatch.h -- Looking for include file dispatch/dispatch.h - not found -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE -- Performing Test CMTK_COMPILER_VAR_AUTO_ARRAYSIZE - Success -- Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE) -- Found ZLIB: /usr/lib/x86_64-linux-gnu/libz.so (found version "1.2.11") -- Using system zlib -- Building bundled mxml due to outdated or broken system mxml (minimum version required is 2.7, version 2.8 is broken; installed version is 0.0) -- Found BZip2: /usr/lib/x86_64-linux-gnu/libbz2.so (found version "1.0.8") -- Looking for BZ2_bzCompressInit -- Looking for BZ2_bzCompressInit - found -- Found system libbz2 -- Could NOT find LZMA (missing: LZMA_LIBRARIES LZMA_INCLUDE_DIRS) -- Found DCMTK: /usr/include/dcmtk/config -- - tested library png -- - tested library tiff -- - tested library CharLS -- Using system DCMTK library. -- Could NOT find PkgConfig (missing: PKG_CONFIG_EXECUTABLE) -- Found SQLite3: /usr/lib/x86_64-linux-gnu/libsqlite3.so -- Using system sqlite3 library -- Check size of long long -- Check size of long long - done -- Looking for strdup -- Looking for strdup - found -- Looking for snprintf -- Looking for snprintf - found -- Looking for vsnprintf -- Looking for vsnprintf - found CMake Warning (dev) at CMakeLists.txt:698 (EXPORT_LIBRARY_DEPENDENCIES): Policy CMP0033 is not set: The export_library_dependencies command should not be called. Run "cmake --help-policy CMP0033" for policy details. Use the cmake_policy command to set the policy and suppress this warning. This warning is for project developers. Use -Wno-dev to suppress it. -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: BUILD_DOCUMENTATION CMAKE_EXPORT_NO_PACKAGE_REGISTRY CMAKE_INSTALL_LIBDIR CMAKE_INSTALL_LOCALSTATEDIR CMAKE_INSTALL_RUNSTATEDIR CMAKE_INSTALL_SYSCONFDIR DART_TESTING_TIMEOUT -- Build files have been written to: /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu make[1]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg' dh_auto_build cd obj-x86_64-linux-gnu && make -j4 "INSTALL=install --strip-program=true" make[1]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<>/cmtk-3.3.1p1+dfsg -B/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[2]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Numerics /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkMxml make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target NrrdIO make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-entity.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-entity.c Scanning dependencies of target cmtkNumerics make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build [ 1%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-attr.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-attr.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-attr.c make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 1%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/comment.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/comment.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/comment.c [ 2%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ap.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ap.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/ap.cxx [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-index.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-index.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-index.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-private.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-private.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-private.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enumsNrrd.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enumsNrrd.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enumsNrrd.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-get.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-get.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-get.c [ 2%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-set.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-set.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-set.c [ 2%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/mop.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/mop.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/mop.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-file.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-file.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-file.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-node.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-node.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-node.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/string.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/string.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/string.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-search.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-search.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-search.c [ 3%] Building C object Utilities/mxml/CMakeFiles/cmtkMxml.dir/mxml-string.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkMxml_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkMxml.dir/mxml-string.c.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml/mxml-string.c [ 3%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/754.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/754.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/754.c [ 3%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/bdsvd.cxx [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/defaultsNrrd.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/defaultsNrrd.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/defaultsNrrd.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseAir.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseAir.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseAir.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/dio.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/dio.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/dio.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/format.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/format.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/format.c [ 4%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/parseNrrd.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/parseNrrd.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/parseNrrd.c [ 4%] Linking C shared library ../../bin/libcmtkMxml.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkMxml.dir/link.txt --verbose=1 /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -Wl,-soname,libcmtkMxml.so -o ../../bin/libcmtkMxml.so CMakeFiles/cmtkMxml.dir/mxml-attr.c.o CMakeFiles/cmtkMxml.dir/mxml-entity.c.o CMakeFiles/cmtkMxml.dir/mxml-index.c.o CMakeFiles/cmtkMxml.dir/mxml-private.c.o CMakeFiles/cmtkMxml.dir/mxml-get.c.o CMakeFiles/cmtkMxml.dir/mxml-set.c.o CMakeFiles/cmtkMxml.dir/mxml-file.c.o CMakeFiles/cmtkMxml.dir/mxml-node.c.o CMakeFiles/cmtkMxml.dir/mxml-search.c.o CMakeFiles/cmtkMxml.dir/mxml-string.c.o make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatEPS.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatEPS.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatEPS.c [ 5%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/System /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkSystem make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 5%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encoding.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encoding.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encoding.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatNRRD.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatNRRD.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatNRRD.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingAscii.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingAscii.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingAscii.c [ 5%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNG.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNG.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNG.c In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingBzip2.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingBzip2.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingBzip2.c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.cxx:123:58: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 123 | CommandLine::Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ) | ^~~~~ [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatPNM.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatPNM.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatPNM.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/accessors.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/accessors.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/accessors.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingGzip.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingGzip.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingGzip.c [ 6%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatText.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatText.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatText.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/array.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/array.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/array.c [ 7%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/bidiagonal.cxx [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingHex.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingHex.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingHex.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/formatVTK.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/formatVTK.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/formatVTK.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/arraysNrrd.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/arraysNrrd.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/arraysNrrd.c [ 7%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/read.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/read.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/read.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/encodingRaw.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/encodingRaw.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/encodingRaw.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/gzio.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/gzio.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/gzio.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/reorder.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/reorder.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/reorder.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/write.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/write.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/write.c [ 8%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/axis.o [ 8%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/blas.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/blas.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/blas.cxx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/axis.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/axis.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianAir.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianAir.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianAir.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/keyvalue.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/keyvalue.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/keyvalue.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffbiff.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffbiff.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffbiff.c [ 9%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/biffmsg.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/biffmsg.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/biffmsg.c [ 9%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/endianNrrd.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/endianNrrd.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/endianNrrd.c [ 9%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/cholesky.cxx [ 10%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/methodsNrrd.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/methodsNrrd.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/methodsNrrd.c In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineCallback.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 11%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/det.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/det.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/det.cxx [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/sane.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/sane.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/sane.c [ 11%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/enum.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/enum.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/enum.c [ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/miscAir.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/miscAir.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/miscAir.c [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/gammaf.cxx [ 12%] Building C object Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/simple.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DNrrdIO_EXPORTS -DTEEM_BUILD=1 -DTEEM_DIO=0 -DTEEM_QNANHIBIT=1 -DTEEM_ZLIB -DTEEM_ZLIB=1 -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/NrrdIO.dir/simple.o -c /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO/simple.c [ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineItem.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/hessenberg.cxx [ 12%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx [ 12%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/hsschur.cxx [ 13%] Linking C shared library ../../bin/libNrrdIO.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO && /usr/bin/cmake -E cmake_link_script CMakeFiles/NrrdIO.dir/link.txt --verbose=1 In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToAction.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /usr/bin/cc -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -Wl,-Bsymbolic-functions -Wl,-z,relro -shared -Wl,-soname,libNrrdIO.so -o ../../bin/libNrrdIO.so CMakeFiles/NrrdIO.dir/comment.o CMakeFiles/NrrdIO.dir/enumsNrrd.o CMakeFiles/NrrdIO.dir/mop.o CMakeFiles/NrrdIO.dir/string.o CMakeFiles/NrrdIO.dir/754.o CMakeFiles/NrrdIO.dir/defaultsNrrd.o CMakeFiles/NrrdIO.dir/parseAir.o CMakeFiles/NrrdIO.dir/dio.o CMakeFiles/NrrdIO.dir/format.o CMakeFiles/NrrdIO.dir/parseNrrd.o CMakeFiles/NrrdIO.dir/formatEPS.o CMakeFiles/NrrdIO.dir/encoding.o CMakeFiles/NrrdIO.dir/formatNRRD.o CMakeFiles/NrrdIO.dir/encodingAscii.o CMakeFiles/NrrdIO.dir/formatPNG.o CMakeFiles/NrrdIO.dir/encodingBzip2.o CMakeFiles/NrrdIO.dir/formatPNM.o CMakeFiles/NrrdIO.dir/accessors.o CMakeFiles/NrrdIO.dir/encodingGzip.o CMakeFiles/NrrdIO.dir/formatText.o CMakeFiles/NrrdIO.dir/array.o CMakeFiles/NrrdIO.dir/encodingHex.o CMakeFiles/NrrdIO.dir/formatVTK.o CMakeFiles/NrrdIO.dir/read.o CMakeFiles/NrrdIO.dir/arraysNrrd.o CMakeFiles/NrrdIO.dir/encodingRaw.o CMakeFiles/NrrdIO.dir/gzio.o CMakeFiles/NrrdIO.dir/reorder.o CMakeFiles/NrrdIO.dir/write.o CMakeFiles/NrrdIO.dir/axis.o CMakeFiles/NrrdIO.dir/endianAir.o CMakeFiles/NrrdIO.dir/keyvalue.o CMakeFiles/NrrdIO.dir/biffbiff.o CMakeFiles/NrrdIO.dir/biffmsg.o CMakeFiles/NrrdIO.dir/endianNrrd.o CMakeFiles/NrrdIO.dir/methodsNrrd.o CMakeFiles/NrrdIO.dir/sane.o CMakeFiles/NrrdIO.dir/enum.o CMakeFiles/NrrdIO.dir/miscAir.o CMakeFiles/NrrdIO.dir/simple.o -lz make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 13%] Built target NrrdIO [ 13%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/ibetaf.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionEnum.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/lbfgsb.cxx [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lq.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lq.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/lq.cxx [ 14%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineKeyToActionSingle.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/lu.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/lu.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/lu.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameter.cxx:31: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 14%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/normaldistr.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx [ 15%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/nsevd.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineNonOptionParameterVector.cxx:31: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineHelp.cxx:34: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:61:45: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] 61 | StdOut << ".TH " << cmd << " \"1\" \"" << __DATE__ << "\" \"CMTK " << ppit->second << "\" \"The Computational Morphometry Toolkit\"\n"; | ^~~~~~~~ [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx [ 15%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineMan.cxx:34: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineWiki.cxx:34: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLineXML.cxx:34: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStream.cxx [ 16%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamFile.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/qr.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/qr.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/qr.cxx [ 17%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamPipe.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/reflections.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/reflections.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/rotations.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/rotations.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sblas.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/sblas.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/sevd.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/sevd.cxx [ 17%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/spddet.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/spddet.cxx [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/studenttdistr.cxx [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/studentttests.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamReaderBase.cxx [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/svd.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/svd.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/svd.cxx [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/tdevd.cxx [ 18%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/tridiagonal.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamZlib.cxx [ 18%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkConsole.cxx [ 19%] Building CXX object libs/Numerics/CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkNumerics_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Numerics/mersenne.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkMemory.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkMountPoints.cxx [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgress.cxx [ 20%] Linking CXX shared library ../../bin/libcmtkNumerics.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkNumerics.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkNumerics.so -o ../../bin/libcmtkNumerics.so CMakeFiles/cmtkNumerics.dir/ap.cxx.o CMakeFiles/cmtkNumerics.dir/bdsvd.cxx.o CMakeFiles/cmtkNumerics.dir/bidiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/blas.cxx.o CMakeFiles/cmtkNumerics.dir/cholesky.cxx.o CMakeFiles/cmtkNumerics.dir/det.cxx.o CMakeFiles/cmtkNumerics.dir/gammaf.cxx.o CMakeFiles/cmtkNumerics.dir/hessenberg.cxx.o CMakeFiles/cmtkNumerics.dir/hsschur.cxx.o CMakeFiles/cmtkNumerics.dir/ibetaf.cxx.o CMakeFiles/cmtkNumerics.dir/lbfgsb.cxx.o CMakeFiles/cmtkNumerics.dir/lq.cxx.o CMakeFiles/cmtkNumerics.dir/lu.cxx.o CMakeFiles/cmtkNumerics.dir/normaldistr.cxx.o CMakeFiles/cmtkNumerics.dir/nsevd.cxx.o CMakeFiles/cmtkNumerics.dir/qr.cxx.o CMakeFiles/cmtkNumerics.dir/reflections.cxx.o CMakeFiles/cmtkNumerics.dir/rotations.cxx.o CMakeFiles/cmtkNumerics.dir/sblas.cxx.o CMakeFiles/cmtkNumerics.dir/sevd.cxx.o CMakeFiles/cmtkNumerics.dir/spddet.cxx.o CMakeFiles/cmtkNumerics.dir/studenttdistr.cxx.o CMakeFiles/cmtkNumerics.dir/studentttests.cxx.o CMakeFiles/cmtkNumerics.dir/svd.cxx.o CMakeFiles/cmtkNumerics.dir/tdevd.cxx.o CMakeFiles/cmtkNumerics.dir/tridiagonal.cxx.o CMakeFiles/cmtkNumerics.dir/mersenne.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,::::::::::::: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx: In function ‘std::string cmtk::FileUtils::GetAbsolutePath(const string&)’: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkFileUtils.cxx:147:11: warning: ignoring return value of ‘char* getcwd(char*, size_t)’, declared with attribute warn_unused_result [-Wunused-result] 147 | getcwd( absPath, PATH_MAX ); | ~~~~~~^~~~~~~~~~~~~~~~~~~~~ [ 20%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkProgressConsole.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 20%] Built target cmtkNumerics [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkRegressionTracker.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkStackBacktrace.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkStrUtility.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreads.cxx [ 21%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadPoolThreads.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkThreadSemaphore.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkTimers.cxx [ 22%] Building CXX object libs/System/CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSystem_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCompressedStreamBZip2.cxx [ 22%] Linking CXX shared library ../../bin/libcmtkSystem.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSystem.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSystem.so -o ../../bin/libcmtkSystem.so CMakeFiles/cmtkSystem.dir/cmtkCommandLine.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineCallback.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineItem.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToAction.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionEnum.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineKeyToActionSingle.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameter.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineNonOptionParameterVector.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineHelp.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineMan.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineXML.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCommandLineWiki.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStream.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamFile.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamPipe.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamReaderBase.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamZlib.cxx.o CMakeFiles/cmtkSystem.dir/cmtkConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkFileUtils.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMemory.cxx.o CMakeFiles/cmtkSystem.dir/cmtkMountPoints.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgress.cxx.o CMakeFiles/cmtkSystem.dir/cmtkProgressConsole.cxx.o CMakeFiles/cmtkSystem.dir/cmtkRegressionTracker.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStackBacktrace.cxx.o CMakeFiles/cmtkSystem.dir/cmtkStrUtility.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadPoolThreads.cxx.o CMakeFiles/cmtkSystem.dir/cmtkThreadSemaphore.cxx.o CMakeFiles/cmtkSystem.dir/cmtkTimers.cxx.o CMakeFiles/cmtkSystem.dir/cmtkCompressedStreamBZip2.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Base /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkBase make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveDeformationModel.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveDeformationModel.cxx [ 22%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkActiveShapeModel.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkActiveShapeModel.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXform.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAffineXformUniformVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAffineXformUniformVolume.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientation.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationBase.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkAnatomicalOrientationPermutationMatrix.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkAnatomicalOrientationPermutationMatrix.cxx [ 23%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkBitVector.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkBitVector.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkCompatibilityMatrix4x4.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkCompatibilityMatrix4x4.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGrid_Crop.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGrid_Crop.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridFilter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridFilter.cxx [ 24%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridConnectedComponents.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridConnectedComponents.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridLocalCorrelation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridLocalCorrelation.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDataGridMorphologicalOperators.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDataGridMorphologicalOperators.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDeformationField_Jacobian.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDeformationField_Jacobian.cxx [ 25%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkDirectionSet.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkDirectionSet.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFilterVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFilterVolume.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToLandmarks.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToLandmarks.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToWarpXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToWarpXform.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitAffineToXformList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitAffineToXformList.cxx [ 26%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitPolynomialToLandmarks.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitPolynomialToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitRigidToLandmarks.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitRigidToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToDeformationField.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToDeformationField.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToLandmarks.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToLandmarks.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitSplineWarpToXformList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitSplineWarpToXformList.cxx [ 27%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFitToXformListBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFitToXformListBase.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkFunctional.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkGeneralLinearModel.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkGeneralLinearModel.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHistogram.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHistogram.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkHypothesisTests.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkHypothesisTests.cxx [ 28%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperation.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropRegion.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropRegion.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationCropThreshold.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDistanceMap.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDistanceMap.cxx [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationDownsample.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx: In member function ‘virtual cmtk::UniformVolume::SmartPtr cmtk::ImageOperationCropThreshold::Apply(cmtk::UniformVolume::SmartPtr&)’: /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 2 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:27: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:36: warning: format ‘%d’ expects argument of type ‘int’, but argument 6 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationCropThreshold.cxx:41:39: warning: format ‘%d’ expects argument of type ‘int’, but argument 7 has type ‘long long int’ [-Wformat=] 41 | printf( "AutoCrop %d,%d,%d,%d,%d,%d\n", cropRegion.From()[0], cropRegion.From()[1], cropRegion.From()[2], cropRegion.To()[0], cropRegion.To()[1], cropRegion.To()[2] ); | ~^ | | | int | %lld [ 29%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationHistogramEqualization.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationMapValues.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationMapValues.cxx /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx: In static member function ‘static void cmtk::ImageOperationDownsample::NewGeneric(bool, const char*)’: /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:43: warning: format ‘%d’ expects argument of type ‘int*’, but argument 3 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:47: warning: format ‘%d’ expects argument of type ‘int*’, but argument 4 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationDownsample.cxx:54:51: warning: format ‘%d’ expects argument of type ‘int*’, but argument 5 has type ‘cmtk::Types::GridIndexType*’ {aka ‘long long int*’} [-Wformat=] 54 | const size_t nFactors = sscanf( arg, "%5d,%5d,%5d", &factorsX, &factorsY, &factorsZ ); | ~~^ ~~~~~~~~~ | | | | int* cmtk::Types::GridIndexType* {aka long long int*} | %5lld [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRegionFilter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRegionFilter.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationHistogramEqualization.cxx:34: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationResampleIsotropic.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationResampleIsotropic.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationScaleToRange.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx [ 30%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationThreshold.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationOtsuThreshold.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationOtsuThreshold.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationPruneHistogram.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationPruneHistogram.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationScaleToRange.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkImageOperationRevert.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkImageOperationRevert.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogram.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogram.cxx [ 31%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkJointHistogramBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkJointHistogramBase.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmark.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmark.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPair.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPair.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkLandmarkPairList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkLandmarkPairList.cxx [ 32%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMagphanEMR051_GetPhantomImage.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMagphanEMR051_GetPhantomImage.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathFunctionWrappers.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathFunctionWrappers.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_LinAlg.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_LinAlg.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Random.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Random.cxx [ 33%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMathUtil_Statistics.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMathUtil_Statistics.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix3x3.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix3x3.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMatrix4x4.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMatrix4x4.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkMetaInformationObject.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkMetaInformationObject.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkParametricPlane.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkParametricPlane.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkPolynomialXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkPolynomialXform.cxx [ 34%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImage.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImage.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkScalarImageGradientField.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkScalarImageGradientField.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSegmentationLabel.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSegmentationLabel.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Inverse.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Inverse.cxx [ 35%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Jacobian.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXform_Rigidity.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkSplineWarpXformUniformVolume.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeToSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformChangeFromSpaceAffine.cxx [ 36%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTransformedVolumeAxes.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArray_Statistics.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramMatching.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayFunctionHistogramEqualization.cxx [ 37%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkTypes.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformDistanceMap.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Crop.cxx [ 38%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Differential.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Resample.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolume_Space.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeGaussianFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeLaplaceFilter.cxx [ 39%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorBase.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeInterpolatorPartialVolume.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumeMorphologicalOperators.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkUniformVolumePainter.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeClipping.cxx [ 40%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolume.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkVolumeGridToGridLookup.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkWarpXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXform_Inverse.cxx [ 41%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o [ 42%] Building CXX object libs/Base/CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformList.cxx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkBase_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Base/cmtkXformListEntry.cxx [ 42%] Linking CXX shared library ../../bin/libcmtkBase.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkBase.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat 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CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Jacobian.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXform_Rigidity.cxx.o CMakeFiles/cmtkBase.dir/cmtkSplineWarpXformUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeToSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformChangeFromSpaceAffine.cxx.o CMakeFiles/cmtkBase.dir/cmtkTransformedVolumeAxes.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArray_Statistics.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramMatching.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayFunctionHistogramEqualization.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypedArrayNoiseEstimatorNaiveGaussian.cxx.o CMakeFiles/cmtkBase.dir/cmtkTypes.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformDistanceMap.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Crop.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Differential.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Resample.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolume_Space.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeGaussianFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeLaplaceFilter.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorBase.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeInterpolatorPartialVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumeMorphologicalOperators.cxx.o CMakeFiles/cmtkBase.dir/cmtkUniformVolumePainter.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeClipping.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolume.cxx.o CMakeFiles/cmtkBase.dir/cmtkVolumeGridToGridLookup.cxx.o CMakeFiles/cmtkBase.dir/cmtkWarpXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform.cxx.o CMakeFiles/cmtkBase.dir/cmtkXform_Inverse.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformList.cxx.o CMakeFiles/cmtkBase.dir/cmtkXformListEntry.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 -lz ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/IO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkIO make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o [ 42%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSplineWarpXformITKIO.cxx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamAffineXform.cxx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkAffineXformITKIO.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamParametricPlane.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamPolynomialXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamStudyList.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkClassStreamWarpXform.cxx [ 43%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkFileFormat.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkGroupwiseRegistrationFunctionalIO.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationApplyMask.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageOperationMatchIntensities.cxx [ 44%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx: In constructor ‘cmtk::ImageFileDICOM::ImageFileDICOM(const string&)’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:155:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 155 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:164:26: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Dataset = std::auto_ptr( fileformat->getAndRemoveDataset() ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:170:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 170 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset.get(), this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkLandmarkListIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkPhantomIO_MagphanEMR051.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageStackDICOM.cxx:33: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSegmentationLabelIO.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSiemensCSAHeader.cxx [ 45%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudy.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkStudyList.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStream.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamInput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx [ 46%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamStudylist.cxx /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx: In member function ‘cmtk::TypedStream::Condition cmtk::TypedStreamOutput::WriteIntArray(const char*, const long long int*, int, int)’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkTypedStreamOutput.cxx:564:25: warning: format ‘%ld’ expects argument of type ‘long int’, but argument 3 has type ‘long long int’ [-Wformat=] 564 | fprintf( File, "%ld ", array[i] ); | ~~^ ~~~~~~~~ | | | | long int long long int | %lld [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFile.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileAnalyze.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileBioRad.cxx [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx: In static member function ‘static void cmtk::VolumeFromFile::WriteMetaImage(const string&, const cmtk::UniformVolume&)’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:33: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:36: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileMetaFile.cxx:87:39: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 87 | fprintf( outfile, "DimSize = %d %d %d\n", volume.m_Dims[AXIS_X], volume.m_Dims[AXIS_Y], volume.m_Dims[AXIS_Z] ); | ~^ | | | int | %lld [ 47%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNRRD.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileNifti.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx: In static member function ‘static const SmartPtr cmtk::VolumeFromFile::ReadVanderbilt(const string&)’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileVanderbilt.cxx:58:10: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 58 | fgets( line, 96, fp ); | ~~~~~^~~~~~~~~~~~~~~~ [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromSlices.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeIO.cxx [ 48%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformListIO.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONifti.cxx [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkXformIONrrd.cxx [ 49%] Building C object libs/IO/CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cc -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fPIC -o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/nifti1_io_math.c [ 49%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx: In member function ‘void cmtk::DICOM::InitFromFile(const string&)’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:112:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 112 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:133:27: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 133 | this->m_Document = std::auto_ptr( new DiDocument( this->m_Dataset, this->m_Dataset->getOriginalXfer(), CIF_AcrNemaCompatibility ) ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.cxx:35: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromFileDICOM.cxx:37: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:137:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 137 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/dcmdata/dctagkey.h:27, from /usr/include/dcmtk/dcmdata/dcdeftag.h:18, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkDICOM.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkVolumeFromStudy.cxx:43: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ [ 50%] Building CXX object libs/IO/CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkIO_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkSQLite.cxx [ 50%] Linking CXX shared library ../../bin/libcmtkIO.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkIO.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkIO.so -o ../../bin/libcmtkIO.so CMakeFiles/cmtkIO.dir/cmtkAffineXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSplineWarpXformITKIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamAffineXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamParametricPlane.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamPolynomialXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkClassStreamWarpXform.cxx.o CMakeFiles/cmtkIO.dir/cmtkFileFormat.cxx.o CMakeFiles/cmtkIO.dir/cmtkGroupwiseRegistrationFunctionalIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationApplyMask.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageOperationMatchIntensities.cxx.o CMakeFiles/cmtkIO.dir/cmtkImageStackDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkLandmarkListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkPhantomIO_MagphanEMR051.cxx.o CMakeFiles/cmtkIO.dir/cmtkSegmentationLabelIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkSiemensCSAHeader.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkStudyList.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStream.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamInput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamOutput.cxx.o CMakeFiles/cmtkIO.dir/cmtkTypedStreamStudylist.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileAnalyze.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileBioRad.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileMetaFile.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNRRD.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileNifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileVanderbilt.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromSlices.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformListIO.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONifti.cxx.o CMakeFiles/cmtkIO.dir/cmtkXformIONrrd.cxx.o CMakeFiles/cmtkIO.dir/nifti1_io_math.c.o CMakeFiles/cmtkIO.dir/cmtkDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromStudy.cxx.o CMakeFiles/cmtkIO.dir/cmtkVolumeFromFileDICOM.cxx.o CMakeFiles/cmtkIO.dir/cmtkSQLite.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads -lz make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Registration /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkRegistration make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestDirectionOptimizer.cxx [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkBestNeighbourOptimizer.cxx [ 50%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 51%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkCongealingFunctional.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkEchoPlanarUnwarpFunctional.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx [ 52%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalBase.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx [ 53%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationOutput.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkGroupwiseRegistrationRMIFunctional.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkHausdorffDistance.cxx [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 54%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationFunctional.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistrationImagePreprocessor.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationFunctional.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 55%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationFunctional.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityJointHistogram.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasure.cxx [ 56%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureCR.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureMSD.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureNCC.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSimilarityMeasureRMS.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx [ 57%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctional.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneFunctionalBase.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMakeInitialAffineTransformation.cxx [ 58%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkMultiChannelRegistrationFunctionalBase.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkProtocolCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkReformatVolume.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationCallback.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkRegistrationJointHistogram.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctional.cxx [ 59%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetricElasticFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkSymmetryPlaneFunctional.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarity.cxx [ 60%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityMemory.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkTypedArraySimilarityRMI.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingAffineFunctional.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCorrRatio.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingCrossCorrelation.cxx [ 61%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingElasticFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingFunctional.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMeanSquaredDifference.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelMatchingMetric_Type.cxx [ 62%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistrationImagePreprocessor.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 63%] Building CXX object libs/Registration/CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRegistration_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageXformDB.cxx [ 63%] Linking CXX shared library ../../bin/libcmtkRegistration.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRegistration.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRegistration.so -o ../../bin/libcmtkRegistration.so CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestDirectionOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkBestNeighbourOptimizer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkEchoPlanarUnwarpFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkElasticRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalAffineInitializer.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp_IO.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationOutput.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkHausdorffDistance.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationCommandLine.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasure.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureCR.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureMSD.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureNCC.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSimilarityMeasureRMS.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricAffineRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImagePairSymmetricNonrigidRegistrationFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneCommandLineBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageSymmetryPlaneFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMakeInitialAffineTransformation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkMultiChannelRegistrationFunctionalBase.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkProtocolCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkReformatVolume.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationCallback.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkRegistrationJointHistogram.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpCongealingFunctionalStaticThreadStorage.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetricElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkSymmetryPlaneFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarity.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityMemory.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkTypedArraySimilarityRMI.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingAffineFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCorrRatio.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingCrossCorrelation.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingElasticFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingFunctional.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMeanSquaredDifference.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelMatchingMetric_Type.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistration.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkVoxelRegistrationImagePreprocessor.cxx.o CMakeFiles/cmtkRegistration.dir/cmtkImageXformDB.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so ../../bin/libcmtkNumerics.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Recon /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= Scanning dependencies of target cmtkRecon make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx [ 63%] Building CXX object libs/Recon/CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o Scanning dependencies of target cmtkSegmentation cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkRecon_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx [ 63%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkInverseInterpolationVolumeReconstructionBase.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Recon/cmtkVolumeInjectionReconstruction.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkAtlasSegmentation.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.cxx [ 64%] Linking CXX shared library ../../bin/libcmtkRecon.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkRecon.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkRecon.so -o ../../bin/libcmtkRecon.so CMakeFiles/cmtkRecon.dir/cmtkInverseInterpolationVolumeReconstructionBase.cxx.o CMakeFiles/cmtkRecon.dir/cmtkVolumeInjectionReconstruction.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 ../../bin/libcmtkMxml.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 64%] Built target cmtkRecon [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalVoting.cxx [ 64%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationLocalWeighting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationSTAPLE.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationVoting.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveraging.cxx [ 65%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkOverlapMeasures.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelset.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx [ 66%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkDetectPhantomMagphanEMR051.cxx [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 67%] Building CXX object libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -DcmtkSegmentation_EXPORTS -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -fPIC -o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx [ 67%] Linking CXX shared library ../../bin/libcmtkSegmentation.so cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation && /usr/bin/cmake -E cmake_link_script CMakeFiles/cmtkSegmentation.dir/link.txt --verbose=1 /usr/bin/c++ -fPIC -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -shared -Wl,-soname,libcmtkSegmentation.so -o ../../bin/libcmtkSegmentation.so CMakeFiles/cmtkSegmentation.dir/cmtkAtlasSegmentation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkEntropyMinimizationIntensityCorrectionFunctional.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationLocalWeighting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationMultiClassSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationSTAPLE.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationVoting.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveraging.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLabelCombinationShapeBasedAveragingInterpolation.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkLeastSquaresPolynomialIntensityBiasField.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkOverlapMeasures.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelset.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSimpleLevelsetCommandLineBase.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkDetectPhantomMagphanEMR051.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionBipolarMatchedFilterFFT.cxx.o CMakeFiles/cmtkSegmentation.dir/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.cxx.o -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../../bin/libcmtkRegistration.so -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkIO.so ../../bin/libcmtkBase.so ../../bin/libcmtkSystem.so -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads ../../bin/libcmtkMxml.so ../../bin/libcmtkNumerics.so ../../bin/libNrrdIO.so -lz -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= Scanning dependencies of target detect_spheres_matched_filter Scanning dependencies of target dcm2image make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Scanning dependencies of target mcwarp Scanning dependencies of target detect_adni_phantom make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/dcm2image.dir/dcm2image.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dcm2image.dir/dcm2image.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx [ 68%] Building CXX object apps/CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o [ 68%] Building CXX object apps/CMakeFiles/mcwarp.dir/mcwarp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcwarp.dir/mcwarp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/detect_adni_phantom.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/detect_spheres_matched_filter.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mcwarp.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:39: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:179:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 179 | std::auto_ptr m_Dataset; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:182:8: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 182 | std::auto_ptr m_Document; | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h: In member function ‘void cmtk::ImageFileDICOM::ReleaseDocument()’: /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:164:29: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 164 | this->m_Document = std::auto_ptr( NULL ); | ^~~~~~~~ In file included from /usr/include/c++/9/bits/locale_conv.h:41, from /usr/include/c++/9/locale:43, from /usr/include/c++/9/iomanip:43, from /usr/include/dcmtk/ofstd/ofstream.h:35, from /usr/include/dcmtk/ofstd/ofstring.h:59, from /usr/include/dcmtk/oflog/tstring.h:33, from /usr/include/dcmtk/oflog/loglevel.h:36, from /usr/include/dcmtk/oflog/logger.h:34, from /usr/include/dcmtk/oflog/oflog.h:28, from /usr/include/dcmtk/dcmdata/dctypes.h:27, from /usr/include/dcmtk/dcmdata/dctk.h:28, from /<>/cmtk-3.3.1p1+dfsg/libs/IO/cmtkImageFileDICOM.h:43, from /<>/cmtk-3.3.1p1+dfsg/apps/dcm2image.cxx:45: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ [ 68%] Linking CXX executable ../bin/detect_spheres_matched_filter cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_spheres_matched_filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_spheres_matched_filter.dir/detect_spheres_matched_filter.cxx.o -o ../bin/detect_spheres_matched_filter -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 68%] Linking CXX executable ../bin/detect_adni_phantom cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/detect_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/detect_adni_phantom.dir/detect_adni_phantom.cxx.o -o ../bin/detect_adni_phantom -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target detect_adni_phantom make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= Scanning dependencies of target asegment_sri24 make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= Scanning dependencies of target xform2scalar make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Building CXX object apps/CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/asegment_sri24.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/xform2scalar.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 68%] Linking CXX executable ../bin/dcm2image cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dcm2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dcm2image.dir/dcm2image.cxx.o -o ../bin/dcm2image -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target dcm2image make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= [ 68%] Linking CXX executable ../bin/asegment_sri24 cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment_sri24.dir/link.txt --verbose=1 Scanning dependencies of target xform2itk make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment_sri24.dir/asegment_sri24.cxx.o -o ../bin/asegment_sri24 -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 68%] Building CXX object apps/CMakeFiles/xform2itk.dir/xform2itk.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2itk.dir/xform2itk.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 68%] Built target asegment_sri24 make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= Scanning dependencies of target xform2dfield make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 69%] Building CXX object apps/CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/xform2itk.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/xform2dfield.cxx:38: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 70%] Linking CXX executable ../bin/xform2scalar cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2scalar.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2scalar.dir/xform2scalar.cxx.o -o ../bin/xform2scalar -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target xform2scalar make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= Scanning dependencies of target warp2ps make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/warp2ps.dir/warp2ps.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp2ps.dir/warp2ps.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/warp2ps.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 70%] Linking CXX executable ../bin/xform2itk cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2itk.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2itk.dir/xform2itk.cxx.o -o ../bin/xform2itk -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Built target xform2itk make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= Scanning dependencies of target warp make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 70%] Building CXX object apps/CMakeFiles/warp.dir/warp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warp.dir/warp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/warp.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkElasticRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/apps/warp.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 70%] Linking CXX executable ../bin/xform2dfield cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/xform2dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/xform2dfield.dir/xform2dfield.cxx.o -o ../bin/xform2dfield -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 71%] Linking CXX executable ../bin/warp cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp.dir/warp.cxx.o -o ../bin/warp -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 71%] Built target xform2dfield make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= Scanning dependencies of target vtkxform make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 71%] Building CXX object apps/CMakeFiles/vtkxform.dir/vtkxform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vtkxform.dir/vtkxform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 71%] Built target warp make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= Scanning dependencies of target volume_reconstruction make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /<>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx: In function ‘int doMain(int, const char**)’: /<>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](0)’ from ‘double’ to ‘float’ [-Wnarrowing] 190 | float xyzFloat[3] = { xyz[0], xyz[1], xyz[2] }; | ^ /<>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](1)’ from ‘double’ to ‘float’ [-Wnarrowing] /<>/cmtk-3.3.1p1+dfsg/apps/vtkxform.cxx:190:47: warning: narrowing conversion of ‘xyz.cmtk::FixedVector<3, double>::.cmtk::FixedArray<3, double>::operator[](2)’ from ‘double’ to ‘float’ [-Wnarrowing] In file included from /<>/cmtk-3.3.1p1+dfsg/apps/volume_reconstruction.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 72%] Linking CXX executable ../bin/warp2ps cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warp2ps.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warp2ps.dir/warp2ps.cxx.o -o ../bin/warp2ps -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target warp2ps make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= Scanning dependencies of target unwarp_image_phantom make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/unwarp_image_phantom.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 72%] Linking CXX executable ../bin/vtkxform cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vtkxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vtkxform.dir/vtkxform.cxx.o -o ../bin/vtkxform -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target vtkxform make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= Scanning dependencies of target unsplit make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Building CXX object apps/CMakeFiles/unsplit.dir/unsplit.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/unsplit.dir/unsplit.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/unsplit.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 72%] Linking CXX executable ../bin/mcwarp cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcwarp.dir/mcwarp.cxx.o -o ../bin/mcwarp -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 72%] Built target mcwarp make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= Scanning dependencies of target ttest make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/ttest.dir/ttest.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/ttest.dir/ttest.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/ttest.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/ttest.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 73%] Linking CXX executable ../bin/unsplit cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unsplit.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unsplit.dir/unsplit.cxx.o -o ../bin/unsplit -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target unsplit make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= Scanning dependencies of target symplx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/symplx.dir/symplx.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/symplx.dir/symplx.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/symplx.cxx [ 73%] Linking CXX executable ../bin/volume_reconstruction cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_reconstruction.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_reconstruction.dir/volume_reconstruction.cxx.o -o ../bin/volume_reconstruction -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target volume_reconstruction make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= Scanning dependencies of target sympl make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Building CXX object apps/CMakeFiles/sympl.dir/sympl.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sympl.dir/sympl.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/sympl.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImageSymmetryPlaneCommandLineBase.h:43, from /<>/cmtk-3.3.1p1+dfsg/apps/symplx.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 74%] Linking CXX executable ../bin/unwarp_image_phantom cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/unwarp_image_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/unwarp_image_phantom.dir/unwarp_image_phantom.cxx.o -o ../bin/unwarp_image_phantom -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target unwarp_image_phantom make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= Scanning dependencies of target streamxform make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/streamxform.dir/streamxform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/streamxform.dir/streamxform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx [ 74%] Linking CXX executable ../bin/symplx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/symplx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/symplx.dir/symplx.cxx.o -o ../bin/symplx -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target symplx make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= Scanning dependencies of target gmm make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/gmm.dir/gmm.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gmm.dir/gmm.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/gmm.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/sympl.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/streamxform.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/gmm.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 74%] Linking CXX executable ../bin/ttest cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/ttest.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/ttest.dir/ttest.cxx.o -o ../bin/ttest -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target ttest make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= Scanning dependencies of target jidb make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Building CXX object apps/CMakeFiles/jidb.dir/jidb.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/jidb.dir/jidb.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/jidb.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/jidb.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 75%] Linking CXX executable ../bin/streamxform cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/streamxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/streamxform.dir/streamxform.cxx.o -o ../bin/streamxform -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 75%] Built target streamxform make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= Scanning dependencies of target geomatch make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 76%] Building CXX object apps/CMakeFiles/geomatch.dir/geomatch.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/geomatch.dir/geomatch.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx [ 77%] Linking CXX executable ../bin/gmm cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gmm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gmm.dir/gmm.cxx.o -o ../bin/gmm -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target gmm make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= Scanning dependencies of target dbtool make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/dbtool.dir/dbtool.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dbtool.dir/dbtool.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/geomatch.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dbtool.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/geomatch cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/geomatch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/geomatch.dir/geomatch.cxx.o -o ../bin/geomatch -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target geomatch make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= Scanning dependencies of target fit_spline_xform make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fit_spline_xform.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/dbtool cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dbtool.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dbtool.dir/dbtool.cxx.o -o ../bin/dbtool -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target dbtool make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= Scanning dependencies of target reorient make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/reorient.dir/reorient.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reorient.dir/reorient.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/reorient.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/reorient.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 78%] Linking CXX executable ../bin/jidb cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/jidb.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/jidb.dir/jidb.cxx.o -o ../bin/jidb -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target jidb make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= [ 78%] Linking CXX executable ../bin/sympl cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sympl.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sympl.dir/sympl.cxx.o -o ../bin/sympl -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so Scanning dependencies of target film make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Building CXX object apps/CMakeFiles/film.dir/film.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/film.dir/film.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/film.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target sympl make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= Scanning dependencies of target fib2image make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Linking CXX executable ../bin/reorient cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reorient.dir/link.txt --verbose=1 [ 78%] Building CXX object apps/CMakeFiles/fib2image.dir/fib2image.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fib2image.dir/fib2image.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reorient.dir/reorient.cxx.o -o ../bin/reorient -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 78%] Linking CXX executable ../bin/fit_spline_xform cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_xform.dir/fit_spline_xform.cxx.o -o ../bin/fit_spline_xform -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target reorient make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_xform_landmarks make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Building CXX object apps/CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 79%] Built target fit_spline_xform make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= Scanning dependencies of target fibxform make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' In file included from /<>/cmtk-3.3.1p1+dfsg/apps/film.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Building CXX object apps/CMakeFiles/fibxform.dir/fibxform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fibxform.dir/fibxform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform_landmarks.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fib2image.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fibxform.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/fit_affine_xform_landmarks cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform_landmarks.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform_landmarks.dir/fit_affine_xform_landmarks.cxx.o -o ../bin/fit_affine_xform_landmarks -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fit_affine_xform_landmarks make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= Scanning dependencies of target epiunwarp make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/epiunwarp.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/fibxform cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fibxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fibxform.dir/fibxform.cxx.o -o ../bin/fibxform -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fibxform make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= Scanning dependencies of target hausdorff make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/hausdorff.dir/hausdorff.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/hausdorff.dir/hausdorff.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/hausdorff.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 80%] Linking CXX executable ../bin/fib2image cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fib2image.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fib2image.dir/fib2image.cxx.o -o ../bin/fib2image -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Built target fib2image make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= Scanning dependencies of target mat2dof make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 80%] Building CXX object apps/CMakeFiles/mat2dof.dir/mat2dof.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mat2dof.dir/mat2dof.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx [ 81%] Linking CXX executable ../bin/hausdorff cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/hausdorff.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/hausdorff.dir/hausdorff.cxx.o -o ../bin/hausdorff -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target hausdorff make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= Scanning dependencies of target regress make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/regress.dir/regress.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/regress.dir/regress.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/regress.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mat2dof.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/regress.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/epiunwarp cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/epiunwarp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/epiunwarp.dir/epiunwarp.cxx.o -o ../bin/epiunwarp -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target epiunwarp make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= Scanning dependencies of target dwi_mask_bad_slices make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dwi_mask_bad_slices.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/film cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/film.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/film.dir/film.cxx.o -o ../bin/film -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target film make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= Scanning dependencies of target histogram make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/histogram.dir/histogram.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/histogram.dir/histogram.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/histogram.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/histogram.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 81%] Linking CXX executable ../bin/regress cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/regress.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/regress.dir/regress.cxx.o -o ../bin/regress -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Built target regress make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= Scanning dependencies of target stream_pixels make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 81%] Building CXX object apps/CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/stream_pixels.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Linking CXX executable ../bin/mat2dof cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mat2dof.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mat2dof.dir/mat2dof.cxx.o -o ../bin/mat2dof -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Built target mat2dof make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= Scanning dependencies of target average_images make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/average_images.dir/average_images.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_images.dir/average_images.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/average_images.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/average_images.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 82%] Linking CXX executable ../bin/histogram cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/histogram.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/histogram.dir/histogram.cxx.o -o ../bin/histogram -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Built target histogram make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_dfield make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 82%] Building CXX object apps/CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx [ 83%] Linking CXX executable ../bin/dwi_mask_bad_slices cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dwi_mask_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dwi_mask_bad_slices.dir/dwi_mask_bad_slices.cxx.o -o ../bin/dwi_mask_bad_slices -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= Scanning dependencies of target asegment make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/asegment.dir/asegment.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/asegment.dir/asegment.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/asegment.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fit_affine_dfield.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/stream_pixels cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/stream_pixels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/stream_pixels.dir/stream_pixels.cxx.o -o ../bin/stream_pixels -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /<>/cmtk-3.3.1p1+dfsg/apps/asegment.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target stream_pixels make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= Scanning dependencies of target pxsearch make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/pxsearch.dir/pxsearch.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/pxsearch.dir/pxsearch.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/pxsearch.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/fit_affine_dfield cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_dfield.dir/fit_affine_dfield.cxx.o -o ../bin/fit_affine_dfield -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target fit_affine_dfield make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= Scanning dependencies of target fit_affine_xform make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Building CXX object apps/CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fit_affine_xform.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 83%] Linking CXX executable ../bin/asegment cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/asegment.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/asegment.dir/asegment.cxx.o -o ../bin/asegment -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target asegment make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= Scanning dependencies of target lvote make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/lvote.dir/lvote.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lvote.dir/lvote.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/lvote.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/lvote.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/average_images cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_images.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_images.dir/average_images.cxx.o -o ../bin/average_images -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target average_images make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= Scanning dependencies of target mk_nifti_hdr make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx [ 84%] Linking CXX executable ../bin/fit_affine_xform cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_affine_xform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_affine_xform.dir/fit_affine_xform.cxx.o -o ../bin/fit_affine_xform -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mk_nifti_hdr.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/pxsearch cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/pxsearch.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/pxsearch.dir/pxsearch.cxx.o -o ../bin/pxsearch -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target fit_affine_xform make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= Scanning dependencies of target vol2csv make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/vol2csv.dir/vol2csv.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/vol2csv.dir/vol2csv.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target pxsearch make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= Scanning dependencies of target groupwise_warp make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/vol2csv.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/groupwise_warp.cxx:39: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 84%] Linking CXX executable ../bin/lvote cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lvote.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lvote.dir/lvote.cxx.o -o ../bin/lvote -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Built target lvote make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= Scanning dependencies of target split make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 84%] Building CXX object apps/CMakeFiles/split.dir/split.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/split.dir/split.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/split.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/split.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Linking CXX executable ../bin/mk_nifti_hdr cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_nifti_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_nifti_hdr.dir/mk_nifti_hdr.cxx.o -o ../bin/mk_nifti_hdr -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target mk_nifti_hdr make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= Scanning dependencies of target avg_adm make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/avg_adm.dir/avg_adm.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/avg_adm.dir/avg_adm.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/avg_adm.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Linking CXX executable ../bin/vol2csv cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/vol2csv.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/vol2csv.dir/vol2csv.cxx.o -o ../bin/vol2csv -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target vol2csv make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= Scanning dependencies of target registrationx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/registrationx.dir/registrationx.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registrationx.dir/registrationx.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistration.h:41, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairAffineRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/apps/registrationx.cxx:40: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 85%] Linking CXX executable ../bin/split cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/split.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/split.dir/split.cxx.o -o ../bin/split -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target split make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= Scanning dependencies of target groupwise_affine make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Building CXX object apps/CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx [ 86%] Linking CXX executable ../bin/registrationx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registrationx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registrationx.dir/registrationx.cxx.o -o ../bin/registrationx -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target registrationx make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= Scanning dependencies of target mk_analyze_hdr make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/groupwise_affine.cxx:39: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mk_analyze_hdr.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/avg_adm cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/avg_adm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/avg_adm.dir/avg_adm.cxx.o -o ../bin/avg_adm -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target avg_adm make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= Scanning dependencies of target average_labels make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/average_labels.dir/average_labels.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_labels.dir/average_labels.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx [ 86%] Linking CXX executable ../bin/groupwise_warp cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_warp.dir/groupwise_warp.cxx.o -o ../bin/groupwise_warp -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target groupwise_warp make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= Scanning dependencies of target concat_affine make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/concat_affine.dir/concat_affine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/concat_affine.dir/concat_affine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/average_labels.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/mk_analyze_hdr cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_analyze_hdr.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_analyze_hdr.dir/mk_analyze_hdr.cxx.o -o ../bin/mk_analyze_hdr -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target mk_analyze_hdr make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= Scanning dependencies of target warpx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/warpx.dir/warpx.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/warpx.dir/warpx.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/warpx.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/concat_affine.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairRegistration.h:39, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistration.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/apps/warpx.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 86%] Linking CXX executable ../bin/warpx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/warpx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/warpx.dir/warpx.cxx.o -o ../bin/warpx -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target warpx make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= Scanning dependencies of target volume_injection make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Building CXX object apps/CMakeFiles/volume_injection.dir/volume_injection.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/volume_injection.dir/volume_injection.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx [ 87%] Linking CXX executable ../bin/average_labels cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_labels.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_labels.dir/average_labels.cxx.o -o ../bin/average_labels -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 87%] Built target average_labels make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= In file included from /<>/cmtk-3.3.1p1+dfsg/apps/volume_injection.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ Scanning dependencies of target groupwise_init make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 88%] Building CXX object apps/CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx [ 89%] Linking CXX executable ../bin/concat_affine cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/concat_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/concat_affine.dir/concat_affine.cxx.o -o ../bin/concat_affine -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so In file included from /<>/cmtk-3.3.1p1+dfsg/apps/groupwise_init.cxx:39: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 89%] Built target concat_affine make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= Scanning dependencies of target mk_adni_phantom make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mk_adni_phantom.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 90%] Linking CXX executable ../bin/groupwise_affine cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_affine.dir/groupwise_affine.cxx.o -o ../bin/groupwise_affine -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target groupwise_affine make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= Scanning dependencies of target sbai make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/sbai.dir/sbai.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sbai.dir/sbai.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/sbai.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/sbai.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 90%] Linking CXX executable ../bin/mk_adni_phantom cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_adni_phantom.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_adni_phantom.dir/mk_adni_phantom.cxx.o -o ../bin/mk_adni_phantom -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target mk_adni_phantom make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= Scanning dependencies of target describe make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Building CXX object apps/CMakeFiles/describe.dir/describe.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/describe.dir/describe.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx [ 90%] Linking CXX executable ../bin/groupwise_init cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/groupwise_init.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/groupwise_init.dir/groupwise_init.cxx.o -o ../bin/groupwise_init -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target groupwise_init make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= Scanning dependencies of target average_affine make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/average_affine.dir/average_affine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/average_affine.dir/average_affine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx: In function ‘void DescribeImage(const char*)’: /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:30: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:40: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:88:50: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 88 | fprintf( stdout, "XDIM\t%d\nYDIM\t%d\nZDIM\t%d\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 3 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:29: warning: format ‘%d’ expects argument of type ‘int’, but argument 4 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld /<>/cmtk-3.3.1p1+dfsg/apps/describe.cxx:124:34: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long long int’ [-Wformat=] 124 | fprintf( stdout, "%d x %d x %d voxels\n", volume->GetDims()[cmtk::AXIS_X], volume->GetDims()[cmtk::AXIS_Y], volume->GetDims()[cmtk::AXIS_Z] ); | ~^ | | | int | %lld In file included from /<>/cmtk-3.3.1p1+dfsg/apps/average_affine.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/volume_injection cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/volume_injection.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/volume_injection.dir/volume_injection.cxx.o -o ../bin/volume_injection -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target volume_injection make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= Scanning dependencies of target glm make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/glm.dir/glm.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/glm.dir/glm.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/glm.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/glm.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 91%] Linking CXX executable ../bin/sbai cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sbai.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sbai.dir/sbai.cxx.o -o ../bin/sbai -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Built target sbai make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= Scanning dependencies of target make_initial_affine make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 91%] Building CXX object apps/CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx [ 91%] Linking CXX executable ../bin/average_affine cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/average_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/average_affine.dir/average_affine.cxx.o -o ../bin/average_affine -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 92%] Linking CXX executable ../bin/describe cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/describe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/describe.dir/describe.cxx.o -o ../bin/describe -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target average_affine make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= Scanning dependencies of target convert_warp make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/convert_warp.dir/convert_warp.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convert_warp.dir/convert_warp.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target describe make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= Scanning dependencies of target destripe make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/destripe.dir/destripe.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/destripe.dir/destripe.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/destripe.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/make_initial_affine.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/convert_warp.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/destripe.cxx:33: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/convert_warp cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convert_warp.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convert_warp.dir/convert_warp.cxx.o -o ../bin/convert_warp -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 92%] Linking CXX executable ../bin/glm cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/glm.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/glm.dir/glm.cxx.o -o ../bin/glm -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target convert_warp make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= Scanning dependencies of target imagemath make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/imagemath.dir/imagemath.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/imagemath.dir/imagemath.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target glm make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= Scanning dependencies of target similarity make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/similarity.dir/similarity.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/similarity.dir/similarity.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/similarity.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/imagemath.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/similarity.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/make_initial_affine cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/make_initial_affine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/make_initial_affine.dir/make_initial_affine.cxx.o -o ../bin/make_initial_affine -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target make_initial_affine make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= Scanning dependencies of target gregxform make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/gregxform.dir/gregxform.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/gregxform.dir/gregxform.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/destripe cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/destripe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/destripe.dir/destripe.cxx.o -o ../bin/destripe -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so /<>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx: In function ‘int doMain(int, const char**)’: /<>/cmtk-3.3.1p1+dfsg/apps/gregxform.cxx:191:12: warning: ignoring return value of ‘char* fgets(char*, int, FILE*)’, declared with attribute warn_unused_result [-Wunused-result] 191 | fgets( line, 80, infile ); | ~~~~~^~~~~~~~~~~~~~~~~~~~ make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target destripe make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= Scanning dependencies of target dof2mat make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/dof2mat.dir/dof2mat.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/dof2mat.dir/dof2mat.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/dof2mat.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 92%] Linking CXX executable ../bin/dof2mat cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/dof2mat.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/dof2mat.dir/dof2mat.cxx.o -o ../bin/dof2mat -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 92%] Linking CXX executable ../bin/similarity cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/similarity.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/similarity.dir/similarity.cxx.o -o ../bin/similarity -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target dof2mat make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= Scanning dependencies of target levelset make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/levelset.dir/levelset.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/levelset.dir/levelset.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/levelset.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target similarity make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= Scanning dependencies of target fit_spline_dfield make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx [ 92%] Linking CXX executable ../bin/gregxform cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/gregxform.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/gregxform.dir/gregxform.cxx.o -o ../bin/gregxform -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target gregxform make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= Scanning dependencies of target lsba make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Building CXX object apps/CMakeFiles/lsba.dir/lsba.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lsba.dir/lsba.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/lsba.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/fit_spline_dfield.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLineBase.h:40, from /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation/cmtkSimpleLevelsetCommandLine.h:41, from /<>/cmtk-3.3.1p1+dfsg/apps/levelset.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/lsba.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 93%] Linking CXX executable ../bin/levelset cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/levelset.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/levelset.dir/levelset.cxx.o -o ../bin/levelset -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 93%] Built target levelset make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= Scanning dependencies of target interleaved_bad_slices make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/interleaved_bad_slices.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 94%] Linking CXX executable ../bin/fit_spline_dfield cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/fit_spline_dfield.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/fit_spline_dfield.dir/fit_spline_dfield.cxx.o -o ../bin/fit_spline_dfield -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target fit_spline_dfield make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= Scanning dependencies of target lmsba make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Building CXX object apps/CMakeFiles/lmsba.dir/lmsba.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/lmsba.dir/lmsba.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/lmsba.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 94%] Linking CXX executable ../bin/lsba cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lsba.dir/lsba.cxx.o -o ../bin/lsba -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 94%] Linking CXX executable ../bin/imagemath cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/imagemath.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/imagemath.dir/imagemath.cxx.o -o ../bin/imagemath -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 94%] Built target lsba make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= Scanning dependencies of target statistics make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/statistics.dir/statistics.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/statistics.dir/statistics.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/statistics.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target imagemath make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= Scanning dependencies of target mk_phantom_3d make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/statistics.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ /<>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx: In function ‘int doMain(int, const char**)’: /<>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:192:7: warning: ‘template class std::auto_ptr’ is deprecated [-Wdeprecated-declarations] 192 | std::auto_ptr fileformat( new DcmFileFormat ); | ^~~~~~~~ In file included from /usr/include/c++/9/memory:80, from /<>/cmtk-3.3.1p1+dfsg/apps/mk_phantom_3d.cxx:46: /usr/include/c++/9/bits/unique_ptr.h:53:28: note: declared here 53 | template class auto_ptr; | ^~~~~~~~ [ 95%] Linking CXX executable ../bin/interleaved_bad_slices cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/interleaved_bad_slices.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/interleaved_bad_slices.dir/interleaved_bad_slices.cxx.o -o ../bin/interleaved_bad_slices -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target interleaved_bad_slices make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= Scanning dependencies of target mrbias make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/mrbias.dir/mrbias.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mrbias.dir/mrbias.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mrbias.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/lmsba cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/lmsba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/lmsba.dir/lmsba.cxx.o -o ../bin/lmsba -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target lmsba make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= Scanning dependencies of target convertx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Building CXX object apps/CMakeFiles/convertx.dir/convertx.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/convertx.dir/convertx.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/convertx.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/convertx.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 95%] Linking CXX executable ../bin/statistics cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/statistics.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/statistics.dir/statistics.cxx.o -o ../bin/statistics -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target statistics make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= Scanning dependencies of target overlap make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/overlap.dir/overlap.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/overlap.dir/overlap.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/overlap.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/overlap.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 96%] Linking CXX executable ../bin/mk_phantom_3d cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mk_phantom_3d.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mk_phantom_3d.dir/mk_phantom_3d.cxx.o -o ../bin/mk_phantom_3d -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target mk_phantom_3d make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= Scanning dependencies of target filter make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/filter.dir/filter.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/filter.dir/filter.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/filter.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/filter.cxx:36: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 96%] Linking CXX executable ../bin/overlap cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/overlap.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/overlap.dir/overlap.cxx.o -o ../bin/overlap -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so [ 96%] Linking CXX executable ../bin/mrbias cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mrbias.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mrbias.dir/mrbias.cxx.o -o ../bin/mrbias -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target overlap make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= Scanning dependencies of target probe make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Building CXX object apps/CMakeFiles/probe.dir/probe.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/probe.dir/probe.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/probe.cxx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target mrbias make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= Scanning dependencies of target reformatx make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 97%] Building CXX object apps/CMakeFiles/reformatx.dir/reformatx.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/reformatx.dir/reformatx.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/probe.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ In file included from /<>/cmtk-3.3.1p1+dfsg/apps/reformatx.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 98%] Linking CXX executable ../bin/filter cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/filter.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/filter.dir/filter.cxx.o -o ../bin/filter -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target filter make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= Scanning dependencies of target registration make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Building CXX object apps/CMakeFiles/registration.dir/registration.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/registration.dir/registration.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/registration.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkVoxelRegistration.h:52, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistration.h:38, from /<>/cmtk-3.3.1p1+dfsg/libs/Registration/cmtkAffineRegistrationCommandLine.h:38, from /<>/cmtk-3.3.1p1+dfsg/apps/registration.cxx:40: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 98%] Linking CXX executable ../bin/registration cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/registration.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/registration.dir/registration.cxx.o -o ../bin/registration -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 98%] Built target registration make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= Scanning dependencies of target sba make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Building CXX object apps/CMakeFiles/sba.dir/sba.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sba.dir/sba.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/sba.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/sba.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 99%] Linking CXX executable ../bin/probe cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/probe.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/probe.dir/probe.cxx.o -o ../bin/probe -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target probe make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= Scanning dependencies of target mcaffine make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Building CXX object apps/CMakeFiles/mcaffine.dir/mcaffine.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/mcaffine.dir/mcaffine.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx In file included from /<>/cmtk-3.3.1p1+dfsg/apps/mcaffine.cxx:37: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 99%] Linking CXX executable ../bin/convertx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/convertx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/convertx.dir/convertx.cxx.o -o ../bin/convertx -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target convertx make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= Scanning dependencies of target sequence make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Building CXX object apps/CMakeFiles/sequence.dir/sequence.cxx.o cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/c++ -DCMTK_USE_DCMTK_JPEG -DHAVE_CONFIG_H -DTEEM_ZLIB -I/<>/cmtk-3.3.1p1+dfsg/Utilities/mxml -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -I/usr/include/dcmtk/config -I/usr/include/dcmtk/dcmdata -I/usr/include/dcmtk/dcmimage -I/usr/include/dcmtk/dcmimgle -I/usr/include/dcmtk/dcmjpeg -I/usr/include/dcmtk/dcmjpls -I/usr/include/dcmtk/ofstd -I/usr/include/dcmtk/oflog -I/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO -I/<>/cmtk-3.3.1p1+dfsg/libs -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -o CMakeFiles/sequence.dir/sequence.cxx.o -c /<>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx [ 99%] Linking CXX executable ../bin/sba cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sba.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sba.dir/sba.cxx.o -o ../bin/sba -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target sba In file included from /<>/cmtk-3.3.1p1+dfsg/apps/sequence.cxx:35: /<>/cmtk-3.3.1p1+dfsg/libs/System/cmtkCommandLine.h:1178:52: warning: dynamic exception specifications are deprecated in C++11 [-Wdeprecated] 1178 | bool Parse( const int argc, const char* argv[] ) throw( ExitException, Self::Exception ); | ^~~~~ [ 99%] Linking CXX executable ../bin/reformatx cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/reformatx.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/reformatx.dir/reformatx.cxx.o -o ../bin/reformatx -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target reformatx [100%] Linking CXX executable ../bin/sequence cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/sequence.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/sequence.dir/sequence.cxx.o -o ../bin/sequence -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target sequence [100%] Linking CXX executable ../bin/mcaffine cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps && /usr/bin/cmake -E cmake_link_script CMakeFiles/mcaffine.dir/link.txt --verbose=1 /usr/bin/c++ -g -O2 -fdebug-prefix-map=/<>/cmtk-3.3.1p1+dfsg=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -fopenmp -DHAVE_CONFIG_H -DTEEM_ZLIB -Wl,-Bsymbolic-functions -Wl,-z,relro -fopenmp -rdynamic CMakeFiles/mcaffine.dir/mcaffine.cxx.o -o ../bin/mcaffine -L/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu -Wl,-rpath,/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu:/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/bin: ../bin/libcmtkSegmentation.so ../bin/libcmtkRecon.so ../bin/libcmtkRegistration.so ../bin/libcmtkIO.so ../bin/libcmtkBase.so ../bin/libcmtkNumerics.so ../bin/libcmtkSystem.so -lpthread ../bin/libNrrdIO.so -lsqlite3 -ldcmdata -ldcmimage -ldcmimgle -ldcmjpeg -ldcmjpls -lijg12 -lijg16 -lijg8 -loflog -lofstd -lbz2 -lfftw3_omp -lfftw3 -lfftw3_threads -lz ../bin/libcmtkMxml.so make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [100%] Built target mcaffine make[2]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make[1]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_test make[1]: Entering directory '/<>/cmtk-3.3.1p1+dfsg' ARGS=--verbose xvfb-run --auto-servernum --server-num=20 \ dh_auto_test cd obj-x86_64-linux-gnu && make -j4 test ARGS\+=-j4 make[2]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Running tests... /usr/bin/ctest --force-new-ctest-process --auto-servernum --server-num '20' -- 'dh_auto_test' -j4 Test project /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu No tests were found!!! make[2]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[1]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary dh binary dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh: warning: invalid flag in DEB_BUILD_OPTIONS: " dh: warning: invalid flag in DEB_BUILD_OPTIONS: nocheck" dh_testroot dh_prep rm -f -- debian/cmtk.substvars rm -fr -- debian/.debhelper/generated/cmtk/ debian/cmtk/ debian/tmp/ dh_installdirs install -d debian/cmtk/etc/cmtk rm -f debian/cmtk.debhelper.log debian/rules override_dh_auto_install make[1]: Entering directory '/<>/cmtk-3.3.1p1+dfsg' dh_auto_install cd obj-x86_64-linux-gnu && make -j4 install DESTDIR=/<>/cmtk-3.3.1p1\+dfsg/debian/cmtk AM_UPDATE_INFO_DIR=no "INSTALL=install --strip-program=true" make[2]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -S/<>/cmtk-3.3.1p1+dfsg -B/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles/progress.marks make -f CMakeFiles/Makefile2 all make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/depend make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/depend make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/Utilities/mxml /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/mxml/CMakeFiles/cmtkMxml.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/Utilities/NrrdIO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Numerics /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Numerics/CMakeFiles/cmtkNumerics.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build.make Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build make -f Utilities/mxml/CMakeFiles/cmtkMxml.dir/build.make Utilities/mxml/CMakeFiles/cmtkMxml.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Numerics/CMakeFiles/cmtkNumerics.dir/build.make libs/Numerics/CMakeFiles/cmtkNumerics.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'Utilities/mxml/CMakeFiles/cmtkMxml.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Numerics/CMakeFiles/cmtkNumerics.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'Utilities/NrrdIO/CMakeFiles/NrrdIO.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 2%] Built target cmtkMxml make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/depend [ 10%] Built target NrrdIO [ 16%] Built target cmtkNumerics make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/System /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/System/CMakeFiles/cmtkSystem.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/System/CMakeFiles/cmtkSystem.dir/build.make libs/System/CMakeFiles/cmtkSystem.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/System/CMakeFiles/cmtkSystem.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 22%] Built target cmtkSystem make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Base /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Base/CMakeFiles/cmtkBase.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Base/CMakeFiles/cmtkBase.dir/build.make libs/Base/CMakeFiles/cmtkBase.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Base/CMakeFiles/cmtkBase.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 42%] Built target cmtkBase make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/IO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/IO/CMakeFiles/cmtkIO.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/IO/CMakeFiles/cmtkIO.dir/build.make libs/IO/CMakeFiles/cmtkIO.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/IO/CMakeFiles/cmtkIO.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 50%] Built target cmtkIO make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Registration /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Registration/CMakeFiles/cmtkRegistration.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Registration/CMakeFiles/cmtkRegistration.dir/build.make libs/Registration/CMakeFiles/cmtkRegistration.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Registration/CMakeFiles/cmtkRegistration.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 63%] Built target cmtkRegistration make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/depend make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Recon /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Recon/CMakeFiles/cmtkRecon.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/libs/Segmentation /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Recon/CMakeFiles/cmtkRecon.dir/build.make libs/Recon/CMakeFiles/cmtkRecon.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Recon/CMakeFiles/cmtkRecon.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build.make libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build [ 63%] Built target cmtkRecon make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'libs/Segmentation/CMakeFiles/cmtkSegmentation.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target cmtkSegmentation make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/depend make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/depend make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/depend make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_adni_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/detect_spheres_matched_filter.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dcm2image.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcwarp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcwarp.dir/build.make apps/CMakeFiles/mcwarp.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dcm2image.dir/build.make apps/CMakeFiles/dcm2image.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/detect_adni_phantom.dir/build.make apps/CMakeFiles/detect_adni_phantom.dir/build make -f apps/CMakeFiles/detect_spheres_matched_filter.dir/build.make apps/CMakeFiles/detect_spheres_matched_filter.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dcm2image.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/detect_adni_phantom.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/detect_spheres_matched_filter.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcwarp.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 67%] Built target dcm2image [ 67%] Built target detect_adni_phantom make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/depend make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2scalar.dir/DependInfo.cmake --color= [ 67%] Built target mcwarp make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment_sri24.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/depend [ 68%] Built target detect_spheres_matched_filter make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2dfield.dir/DependInfo.cmake --color= cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/xform2itk.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2scalar.dir/build.make apps/CMakeFiles/xform2scalar.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment_sri24.dir/build.make apps/CMakeFiles/asegment_sri24.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2dfield.dir/build.make apps/CMakeFiles/xform2dfield.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2scalar.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/xform2itk.dir/build.make apps/CMakeFiles/xform2itk.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/asegment_sri24.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2dfield.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/xform2itk.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 69%] Built target xform2scalar [ 69%] Built target asegment_sri24 make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/depend [ 70%] Built target xform2dfield make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/depend make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vtkxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warp2ps.dir/DependInfo.cmake --color= [ 70%] Built target xform2itk make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_reconstruction.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp2ps.dir/build.make apps/CMakeFiles/warp2ps.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warp.dir/build.make apps/CMakeFiles/warp.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vtkxform.dir/build.make apps/CMakeFiles/vtkxform.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp2ps.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_reconstruction.dir/build.make apps/CMakeFiles/volume_reconstruction.dir/build [ 70%] Built target warp2ps make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warp.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unwarp_image_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vtkxform.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_reconstruction.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 71%] Built target warp make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/unsplit.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unwarp_image_phantom.dir/build.make apps/CMakeFiles/unwarp_image_phantom.dir/build [ 72%] Built target vtkxform [ 72%] Built target volume_reconstruction make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/depend make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/symplx.dir/DependInfo.cmake --color= cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/ttest.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unwarp_image_phantom.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/unsplit.dir/build.make apps/CMakeFiles/unsplit.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/unsplit.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 73%] Built target unwarp_image_phantom make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sympl.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/ttest.dir/build.make apps/CMakeFiles/ttest.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/symplx.dir/build.make apps/CMakeFiles/symplx.dir/build [ 73%] Built target unsplit make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/streamxform.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/ttest.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/symplx.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sympl.dir/build.make apps/CMakeFiles/sympl.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/streamxform.dir/build.make apps/CMakeFiles/streamxform.dir/build [ 73%] Built target symplx make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gmm.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/streamxform.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sympl.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 74%] Built target ttest make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gmm.dir/build.make apps/CMakeFiles/gmm.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/jidb.dir/DependInfo.cmake --color= [ 75%] Built target streamxform make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gmm.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/depend [ 75%] Built target sympl make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/geomatch.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dbtool.dir/DependInfo.cmake --color= [ 76%] Built target gmm make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_xform.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/jidb.dir/build.make apps/CMakeFiles/jidb.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/geomatch.dir/build.make apps/CMakeFiles/geomatch.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_xform.dir/build.make apps/CMakeFiles/fit_spline_xform.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/jidb.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/geomatch.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dbtool.dir/build.make apps/CMakeFiles/dbtool.dir/build [ 76%] Built target jidb make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_xform.dir/build'. make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reorient.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dbtool.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 77%] Built target geomatch [ 77%] Built target fit_spline_xform make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/depend [ 78%] Built target dbtool make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/film.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fib2image.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform_landmarks.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reorient.dir/build.make apps/CMakeFiles/reorient.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/film.dir/build.make apps/CMakeFiles/film.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform_landmarks.dir/build.make apps/CMakeFiles/fit_affine_xform_landmarks.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fib2image.dir/build.make apps/CMakeFiles/fib2image.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reorient.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/film.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform_landmarks.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 78%] Built target reorient make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fib2image.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fibxform.dir/DependInfo.cmake --color= [ 78%] Built target fib2image [ 78%] Built target film [ 79%] Built target fit_affine_xform_landmarks make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/depend make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/epiunwarp.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/hausdorff.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mat2dof.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fibxform.dir/build.make apps/CMakeFiles/fibxform.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/epiunwarp.dir/build.make apps/CMakeFiles/epiunwarp.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fibxform.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mat2dof.dir/build.make apps/CMakeFiles/mat2dof.dir/build [ 80%] Built target fibxform make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/hausdorff.dir/build.make apps/CMakeFiles/hausdorff.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/regress.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/epiunwarp.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mat2dof.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/hausdorff.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/regress.dir/build.make apps/CMakeFiles/regress.dir/build [ 80%] Built target epiunwarp make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/depend [ 81%] Built target mat2dof [ 82%] Built target hausdorff make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/depend make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dwi_mask_bad_slices.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/stream_pixels.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/histogram.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/regress.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dwi_mask_bad_slices.dir/build.make apps/CMakeFiles/dwi_mask_bad_slices.dir/build [ 82%] Built target regress make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dwi_mask_bad_slices.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_images.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/stream_pixels.dir/build.make apps/CMakeFiles/stream_pixels.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/stream_pixels.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target dwi_mask_bad_slices make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/histogram.dir/build.make apps/CMakeFiles/histogram.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_dfield.dir/DependInfo.cmake --color= [ 83%] Built target stream_pixels make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/asegment.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_images.dir/build.make apps/CMakeFiles/average_images.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/histogram.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_images.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/asegment.dir/build.make apps/CMakeFiles/asegment.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_dfield.dir/build.make apps/CMakeFiles/fit_affine_dfield.dir/build [ 83%] Built target histogram make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/pxsearch.dir/DependInfo.cmake --color= [ 83%] Built target average_images make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_dfield.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/asegment.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_affine_xform.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/pxsearch.dir/build.make apps/CMakeFiles/pxsearch.dir/build [ 83%] Built target asegment make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/depend [ 83%] Built target fit_affine_dfield make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/pxsearch.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lvote.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_nifti_hdr.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_affine_xform.dir/build.make apps/CMakeFiles/fit_affine_xform.dir/build [ 83%] Built target pxsearch make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_affine_xform.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lvote.dir/build.make apps/CMakeFiles/lvote.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/vol2csv.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_nifti_hdr.dir/build.make apps/CMakeFiles/mk_nifti_hdr.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lvote.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 83%] Built target fit_affine_xform make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_warp.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_nifti_hdr.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/vol2csv.dir/build.make apps/CMakeFiles/vol2csv.dir/build [ 84%] Built target lvote make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/split.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_warp.dir/build.make apps/CMakeFiles/groupwise_warp.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/vol2csv.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target mk_nifti_hdr make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/avg_adm.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/split.dir/build.make apps/CMakeFiles/split.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_warp.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 85%] Built target vol2csv make[4]: Nothing to be done for 'apps/CMakeFiles/split.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/avg_adm.dir/build.make apps/CMakeFiles/avg_adm.dir/build make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registrationx.dir/DependInfo.cmake --color= [ 85%] Built target split [ 85%] Built target groupwise_warp make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/avg_adm.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/depend make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_affine.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_analyze_hdr.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registrationx.dir/build.make apps/CMakeFiles/registrationx.dir/build [ 85%] Built target avg_adm make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_labels.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_analyze_hdr.dir/build.make apps/CMakeFiles/mk_analyze_hdr.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_affine.dir/build.make apps/CMakeFiles/groupwise_affine.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registrationx.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target registrationx make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_analyze_hdr.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_labels.dir/build.make apps/CMakeFiles/average_labels.dir/build make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/concat_affine.dir/DependInfo.cmake --color= [ 86%] Built target mk_analyze_hdr make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_affine.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/warpx.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_labels.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 86%] Built target groupwise_affine make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/depend [ 87%] Built target average_labels make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/groupwise_init.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/concat_affine.dir/build.make apps/CMakeFiles/concat_affine.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/warpx.dir/build.make apps/CMakeFiles/warpx.dir/build cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/volume_injection.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/concat_affine.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/warpx.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/groupwise_init.dir/build.make apps/CMakeFiles/groupwise_init.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/volume_injection.dir/build.make apps/CMakeFiles/volume_injection.dir/build [ 88%] Built target concat_affine make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/depend [ 88%] Built target warpx make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_adni_phantom.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sbai.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/volume_injection.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/groupwise_init.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_adni_phantom.dir/build.make apps/CMakeFiles/mk_adni_phantom.dir/build [ 88%] Built target volume_injection make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/depend [ 89%] Built target groupwise_init make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/describe.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/average_affine.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sbai.dir/build.make apps/CMakeFiles/sbai.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_adni_phantom.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/describe.dir/build.make apps/CMakeFiles/describe.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sbai.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/average_affine.dir/build.make apps/CMakeFiles/average_affine.dir/build [ 90%] Built target mk_adni_phantom make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/describe.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 90%] Built target sbai make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/glm.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/make_initial_affine.dir/DependInfo.cmake --color= [ 91%] Built target describe make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/average_affine.dir/build'. make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convert_warp.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/glm.dir/build.make apps/CMakeFiles/glm.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/make_initial_affine.dir/build.make apps/CMakeFiles/make_initial_affine.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convert_warp.dir/build.make apps/CMakeFiles/convert_warp.dir/build [ 92%] Built target average_affine make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/destripe.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/glm.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/make_initial_affine.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/convert_warp.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/destripe.dir/build.make apps/CMakeFiles/destripe.dir/build [ 92%] Built target make_initial_affine [ 92%] Built target convert_warp make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/depend make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/imagemath.dir/DependInfo.cmake --color= [ 92%] Built target glm make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/similarity.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/destripe.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/gregxform.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/imagemath.dir/build.make apps/CMakeFiles/imagemath.dir/build [ 92%] Built target destripe make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/dof2mat.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/similarity.dir/build.make apps/CMakeFiles/similarity.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/imagemath.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/gregxform.dir/build.make apps/CMakeFiles/gregxform.dir/build [ 92%] Built target imagemath make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/dof2mat.dir/build.make apps/CMakeFiles/dof2mat.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/levelset.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/gregxform.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/similarity.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/dof2mat.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 92%] Built target gregxform make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/levelset.dir/build.make apps/CMakeFiles/levelset.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/fit_spline_dfield.dir/DependInfo.cmake --color= [ 92%] Built target similarity make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/levelset.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lsba.dir/DependInfo.cmake --color= [ 93%] Built target levelset make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/fit_spline_dfield.dir/build.make apps/CMakeFiles/fit_spline_dfield.dir/build [ 93%] Built target dof2mat make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/interleaved_bad_slices.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lsba.dir/build.make apps/CMakeFiles/lsba.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/lmsba.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/fit_spline_dfield.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lsba.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/interleaved_bad_slices.dir/build.make apps/CMakeFiles/interleaved_bad_slices.dir/build [ 93%] Built target fit_spline_dfield make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/interleaved_bad_slices.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/depend make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/lmsba.dir/build.make apps/CMakeFiles/lmsba.dir/build [ 93%] Built target lsba make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/statistics.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/depend [ 94%] Built target interleaved_bad_slices make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mk_phantom_3d.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mrbias.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/lmsba.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/statistics.dir/build.make apps/CMakeFiles/statistics.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mrbias.dir/build.make apps/CMakeFiles/mrbias.dir/build [ 94%] Built target lmsba make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/convertx.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mk_phantom_3d.dir/build.make apps/CMakeFiles/mk_phantom_3d.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/statistics.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mrbias.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mk_phantom_3d.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/convertx.dir/build.make apps/CMakeFiles/convertx.dir/build [ 95%] Built target statistics make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/overlap.dir/DependInfo.cmake --color= [ 95%] Built target mk_phantom_3d make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/depend make[4]: Nothing to be done for 'apps/CMakeFiles/convertx.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target mrbias make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/filter.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/probe.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 95%] Built target convertx make -f apps/CMakeFiles/overlap.dir/build.make apps/CMakeFiles/overlap.dir/build make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/reformatx.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/filter.dir/build.make apps/CMakeFiles/filter.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/probe.dir/build.make apps/CMakeFiles/probe.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/overlap.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/reformatx.dir/build.make apps/CMakeFiles/reformatx.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/probe.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/filter.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/reformatx.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 96%] Built target overlap make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/depend [ 96%] Built target probe [ 97%] Built target filter make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/depend make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/depend [ 98%] Built target reformatx make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/registration.dir/DependInfo.cmake --color= make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/depend make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/mcaffine.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sba.dir/DependInfo.cmake --color= make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' cd /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /<>/cmtk-3.3.1p1+dfsg /<>/cmtk-3.3.1p1+dfsg/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/apps/CMakeFiles/sequence.dir/DependInfo.cmake --color= make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/registration.dir/build.make apps/CMakeFiles/registration.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sba.dir/build.make apps/CMakeFiles/sba.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/registration.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sba.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/mcaffine.dir/build.make apps/CMakeFiles/mcaffine.dir/build make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make -f apps/CMakeFiles/sequence.dir/build.make apps/CMakeFiles/sequence.dir/build make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/sequence.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target sba make[4]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[4]: Nothing to be done for 'apps/CMakeFiles/mcaffine.dir/build'. make[4]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' [ 99%] Built target registration [100%] Built target sequence [100%] Built target mcaffine make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' /usr/bin/cmake -E cmake_progress_start /<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu/CMakeFiles 0 make -f CMakeFiles/Makefile2 preinstall make[3]: Entering directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' make[3]: Nothing to be done for 'preinstall'. make[3]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "None" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/COPYING.txt -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc/README.txt -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.numdiff -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.mxml -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.sqlite3 -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.NrrdIO -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.alglib -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.dcmtk -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.vtk -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.zlib -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc//Licenses/LICENSE.cmtk -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/UseCMTK.cmake -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKConfig.cmake -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtkconfig.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/CMTKLibraryDepends.cmake -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libNrrdIO.so -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/NrrdIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_NrrdIO_mangle.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateAir.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateBiff.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/privateNrrd.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teem32bit.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemDio.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemEndian.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemPng.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/teemQnanhibit.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkMxml.so -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/cmtk_mxml_mangle.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml-private.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/mxml.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/config.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/avg_adm" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/describe" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_init" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_affine" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_warp" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_affine" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_images" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/average_labels" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/concat_affine" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convertx" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/convert_warp" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/destripe" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dof2mat" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/epiunwarp" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fibxform" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fib2image" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/film" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/filter" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/geomatch" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/glm" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gmm" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/gregxform" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/hausdorff" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/histogram" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/imagemath" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/jidb" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/levelset" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lsba" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lmsba" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/lvote" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/make_initial_affine" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mat2dof" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mrbias" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/overlap" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/probe" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/pxsearch" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reformatx" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registration" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/registrationx" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/regress" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/reorient" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sba" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sbai" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sequence" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/similarity" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/split" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/statistics" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/stream_pixels" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/streamxform" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/sympl" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/symplx" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/ttest" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unsplit" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vol2csv" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_injection" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/vtkxform" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warpx" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/warp2ps" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2dfield" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2itk" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/xform2scalar" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dbtool" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/asegment_sri24" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcaffine" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/mcwarp" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/dcm2image" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSystem.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCannotBeCopied.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineTypeTraits.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCompressedStream.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkConsole.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCoverity.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkDebugOutput.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkException.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkExitException.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFFTW.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkFileUtils.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkLockingPtr.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMemory.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMountPoints.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkMutexLock.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgress.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkProgressConsole.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkRegressionTracker.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterGCD.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSafeCounterMutex.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartConstPtr.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkSmartPtr.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStackBacktrace.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkStrUtility.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTestFunctionMap.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameters.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPool.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphore.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSystemTypes.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreads.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkTimers.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/doxygen.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineConvert.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineItem.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineList.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineOption.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkCommandLineVector.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadParameterArray.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolGCD.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadPoolThreads.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreAppleIsRetarded.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreNone.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphorePOSIX.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/System/cmtkThreadSemaphoreWindows.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ap.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/apvt.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bdsvd.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/bidiagonal.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/blas.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/cholesky.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/det.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/gammaf.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hessenberg.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/hsschur.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/ibetaf.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/igammaf.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lbfgsb.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lq.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/lu.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/normaldistr.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/nsevd.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/qr.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/randomc.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/reflections.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/rotations.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sblas.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/sevd.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/spddet.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studenttdistr.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/studentttests.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/svd.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tdevd.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Numerics/tridiagonal.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkBase.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveDeformationModel.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkActiveShapeModel.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAffineXformUniformVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkAnatomicalOrientationBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkBitVector.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCompatibilityMatrix4x4.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicInterpolator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkCubicSpline.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridLocalCorrelation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridMorphologicalOperators.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataTypeTraits.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDeformationField.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDetectedPhantomMagphanEMR051.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDirectionSet.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDistanceMap.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterMask.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFilterVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToLandmarks.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToWarpXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitAffineToXformList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitPolynomialToLandmarks.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitRigidToLandmarks.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToDeformationField.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToLandmarks.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitSplineWarpToXformList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFitToXformListBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedArray.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedVector.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGaussianKernel.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkGeneralLinearModel.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHashMapSTL.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHypothesisTests.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationBoundaryMap.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConnectedComponents.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationConvertType.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropRegion.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationCropThreshold.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDistanceMap.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationDownsample.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationErodeDilateDistance.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationFlip.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationGaussFilter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationHistogramEqualization.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationLaplaceFilter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationMapValues.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationOtsuThreshold.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationPruneHistogram.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRegionFilter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationReplace.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationResampleIsotropic.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationRevert.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationScaleToRange.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetDataClass.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationSetPadding.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageOperationThreshold.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkImageTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkInterpolator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogram.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkJointHistogramBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmark.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPair.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLandmarkPairList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLeastSquares.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLinearInterpolator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkLogHistogram.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMacros.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMagphanEMR051.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathFunctionWrappers.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix3x3.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMatrix4x4.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMetaInformationObject.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkNearestNeighborInterpolator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkParametricPlane.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomial.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkPolynomialXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkProbeInfo.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionIndexIterator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegionSphereIterator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImage.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkScalarImageGradientField.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSegmentationLabel.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSincInterpolator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSplineWarpXformUniformVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSurfaceNormal.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkSymmetricMatrix.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeFromSpaceAffine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformChangeToSpaceAffine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTransformedVolumeAxes.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArray.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunction.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramEqualization.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayFunctionHistogramMatching.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypedArrayNoiseEstimatorNaiveGaussian.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTypes.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformDistanceMap.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeGaussianFilter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeHoughTransformSphere.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolatorPartialVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeLaplaceFilter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeMorphologicalOperators.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumePainter.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnionFind.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUnits.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector3D.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeClipping.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolumeGridToGridLookup.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkWarpXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformListEntry.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkXformUniformVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/doxygen.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGrid.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkDataGridFilter.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenSystemSymmetricMatrix3x3.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkEigenValuesSymmetricMatrix.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkFixedSquareMatrix.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogram.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramOtsuThreshold.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkHistogramThresholdByVolume.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkMathUtil_Statistics.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkQRDecomposition.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkRegion.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkTemplateArray_Statistics.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolume.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkUniformVolumeInterpolator.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkValueSequence.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVector.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Base/cmtkVolume.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkIO.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAffineXformITKIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkAnalyze.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamAffineXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamInput.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamOutput.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamPolynomialXform.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamStudyList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkDICOM.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileConstHeader.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileFormat.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkFileHeader.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkGroupwiseRegistrationFunctionalIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageFileDICOM.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationApplyMask.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageOperationMatchIntensities.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkImageStackDICOM.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkLandmarkListIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkPhantomIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSQLite.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSegmentationLabelIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSiemensCSAHeader.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkSplineWarpXformITKIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudy.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyImageSet.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkStudyList.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStream.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamInput.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamOutput.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkTypedStreamStudylist.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromFile.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromSlices.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeFromStudy.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkVolumeIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkXformListIO.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/doxygen.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/nifti1_io_math.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/IO/cmtkClassStreamMultiChannelRegistration.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineCongealingFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineGroupwiseRegistrationRMIFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineRegistrationCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestDirectionOptimizer.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkBestNeighbourOptimizer.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkCongealingFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkEchoPlanarUnwarpFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkElasticRegistrationCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalAffineInitializer.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplateBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_Affine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationFunctionalXformTemplate_SplineWarp.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationOutput.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkGroupwiseRegistrationRMIFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkHausdorffDistance.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityJointHistogram.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasure.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureCR.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMI.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureMSD.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNCC.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureNMI.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSimilarityMeasureRMS.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricAffineRegistrationFunctionalTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairSymmetricNonrigidRegistrationFunctionalTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneCommandLineBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageSymmetryPlaneFunctionalBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImageXformDB.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMakeInitialAffineTransformation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctionalBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizer.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkOptimizerBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkProtocolCallback.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationCallback.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkRegistrationJointHistogram.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkScaleHistogramValueTrait.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSearchTrace.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetricElasticFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSymmetryPlaneFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTemplateMultiChannelRegistrationFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarity.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkTypedArraySimilarityMemory.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingAffineFunctionalTemplate.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCorrRatio.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingCrossCorrelation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingElasticFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMeanSquaredDifference.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric_Type.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMutInf.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingNormMutInf.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelRegistration.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/doxygen.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkAffineMultiChannelRegistrationFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairAffineRegistrationFunctionalTemplate.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkImagePairNonrigidRegistrationFunctionalTemplate.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelHistogramRegistrationFunctionalMetricData.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRMIRegistrationFunctionalMetricData.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkMultiChannelRegistrationFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolume.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeJacobian.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumePlain.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkReformatVolumeReformat.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpCongealingFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpGroupwiseRegistrationRMIFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelIntensityCorrectionRegistrationFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkSplineWarpMultiChannelRegistrationFunctionalThreadFunctions.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Registration/cmtkVoxelMatchingMetric.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkAtlasSegmentation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkDetectPhantomMagphanEMR051.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctionalBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalBinaryShapeBasedAveraging.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalShapeBasedAveraging.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalVoting.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationLocalWeighting.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationMultiClassSTAPLE.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationSTAPLE.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveraging.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationShapeBasedAveragingInterpolation.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLabelCombinationVoting.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkLeastSquaresPolynomialIntensityBiasField.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkMultiChannelEntropyMinimizationIntensityCorrectionFunctional.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkOverlapMeasures.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelset.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLine.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSimpleLevelsetCommandLineBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionBipolarMatchedFilterFFT.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkSphereDetectionNormalizedBipolarMatchedFilterFFT.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/doxygen.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Segmentation/cmtkEntropyMinimizationIntensityCorrectionFunctional.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so -- Set runtime path of "/<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/libcmtkRecon.so" to "/usr/lib/cmtk" -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstructionBase.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionBox.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkPointSpreadFunctionGaussian.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkVolumeInjectionReconstruction.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/doxygen.h -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkDeblurringVolumeReconstruction.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include/cmtk/Recon/cmtkInverseInterpolationVolumeReconstruction.txx -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking.sh -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_locking_procmail.sh -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- Installing: /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/bin/cmtk make[2]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg/obj-x86_64-linux-gnu' : # Remove not needed headers, cmake files etc rm -fr /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/include /usr/bin/find /<>/cmtk-3.3.1p1+dfsg/debian/cmtk -iname *.cmake -delete /usr/bin/find: paths must precede expression: `cmtkConfigureCPack.cmake' /usr/bin/find: possible unquoted pattern after predicate `-iname'? make[1]: [debian/rules:72: override_dh_auto_install] Error 1 (ignored) : # Prune duplicate docs rm -fr /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/cmtk/doc : # Generate manpages xvfb-run --auto-servernum --server-num=20 \ scripts/gen_manpages \ || dpkg -l xvfb | awk '/xvfb/{print ;}' | grep -q ubuntu ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh: 37: .: Can't open /usr/lib/cmtk/bin/cmtk_locking.sh Manpage for /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/cmtk_functions.sh -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion: 34: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion: 34: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_dwi_distortion_and_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion: 36: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/correct_nex_motion -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat: 36: .: Can't open /usr/lib/cmtk/bin/cmtk_functions.sh Manpage for /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/groupwise_reformat -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging: line 34: /usr/lib/cmtk/bin/cmtk_functions.sh: No such file or directory Manpage for /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/lib/cmtk/bin/iterative_shape_averaging -- FAILED ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. ERROR: ld.so: object 'libfakeroot-sysv.so' from LD_PRELOAD cannot be preloaded (cannot open shared object file): ignored. : # Above condition just to ignore unclean exit from xvfb on elderly broken ubuntus : # Cleaner solution patches are welcome! make[1]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg' dh_install cp --reflink=auto -a ./debian/cmtk.sh debian/cmtk/etc/cmtk/ install -d debian/.debhelper/generated/cmtk dh_installdocs install -d debian/cmtk/usr/share/doc/cmtk cp --reflink=auto -a ./README.txt debian/cmtk/usr/share/doc/cmtk cd './debian/upstream/..' && find 'upstream' \( -type f -or -type l \) -and ! -empty -print0 | LC_ALL=C sort -z | xargs -0 -I {} cp --reflink=auto --parents -dp {} /<>/cmtk-3.3.1p1+dfsg/debian/cmtk/usr/share/doc/cmtk chown -R 0:0 debian/cmtk/usr/share/doc chmod -R u\+rw,go=rX debian/cmtk/usr/share/doc install -p -m0644 debian/README.Debian debian/cmtk/usr/share/doc/cmtk/README.Debian install -p -m0644 debian/TODO debian/cmtk/usr/share/doc/cmtk/TODO.Debian install -p -m0644 debian/copyright debian/cmtk/usr/share/doc/cmtk/copyright dh_installchangelogs install -p -m0644 debian/changelog debian/cmtk/usr/share/doc/cmtk/changelog.Debian rm -f debian/cmtk.debhelper.log debian/rules override_dh_installman make[1]: Entering directory '/<>/cmtk-3.3.1p1+dfsg' dh_installman debian/manpages/* install -d debian/cmtk/usr/share/man/man1/ install -p -m0644 debian/manpages/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment.1 install -p -m0644 debian/manpages/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 install -p -m0644 debian/manpages/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 install -p -m0644 debian/manpages/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 install -p -m0644 debian/manpages/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 install -p -m0644 debian/manpages/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 install -p -m0644 debian/manpages/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 install -p -m0644 debian/manpages/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 install -p -m0644 debian/manpages/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 install -p -m0644 debian/manpages/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 install -p -m0644 debian/manpages/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 install -p -m0644 debian/manpages/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 install -p -m0644 debian/manpages/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 install -p -m0644 debian/manpages/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 install -p -m0644 debian/manpages/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 install -p -m0644 debian/manpages/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 install -p -m0644 debian/manpages/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 install -p -m0644 debian/manpages/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 install -p -m0644 debian/manpages/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 install -p -m0644 debian/manpages/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 install -p -m0644 debian/manpages/cmtk-filter.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 install -p -m0644 debian/manpages/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 install -p -m0644 debian/manpages/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 install -p -m0644 debian/manpages/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 install -p -m0644 debian/manpages/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 install -p -m0644 debian/manpages/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 install -p -m0644 debian/manpages/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 install -p -m0644 debian/manpages/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 install -p -m0644 debian/manpages/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 install -p -m0644 debian/manpages/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 install -p -m0644 debian/manpages/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 install -p -m0644 debian/manpages/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 install -p -m0644 debian/manpages/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 install -p -m0644 debian/manpages/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 install -p -m0644 debian/manpages/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 install -p -m0644 debian/manpages/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 install -p -m0644 debian/manpages/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 install -p -m0644 debian/manpages/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 install -p -m0644 debian/manpages/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 install -p -m0644 debian/manpages/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 install -p -m0644 debian/manpages/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 install -p -m0644 debian/manpages/cmtk-lvote.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 install -p -m0644 debian/manpages/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 install -p -m0644 debian/manpages/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 install -p -m0644 debian/manpages/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 install -p -m0644 debian/manpages/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 install -p -m0644 debian/manpages/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 install -p -m0644 debian/manpages/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 install -p -m0644 debian/manpages/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 install -p -m0644 debian/manpages/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 install -p -m0644 debian/manpages/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 install -p -m0644 debian/manpages/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 install -p -m0644 debian/manpages/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 install -p -m0644 debian/manpages/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 install -p -m0644 debian/manpages/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 install -p -m0644 debian/manpages/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 install -p -m0644 debian/manpages/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 install -p -m0644 debian/manpages/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 install -p -m0644 debian/manpages/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 install -p -m0644 debian/manpages/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 install -p -m0644 debian/manpages/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 install -p -m0644 debian/manpages/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 install -p -m0644 debian/manpages/cmtk-split.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 install -p -m0644 debian/manpages/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-statistics.1 install -p -m0644 debian/manpages/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 install -p -m0644 debian/manpages/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 install -p -m0644 debian/manpages/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 install -p -m0644 debian/manpages/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 install -p -m0644 debian/manpages/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 install -p -m0644 debian/manpages/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 install -p -m0644 debian/manpages/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 install -p -m0644 debian/manpages/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 install -p -m0644 debian/manpages/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 install -p -m0644 debian/manpages/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 install -p -m0644 debian/manpages/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 install -p -m0644 debian/manpages/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 install -p -m0644 debian/manpages/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 install -p -m0644 debian/manpages/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 install -p -m0644 debian/manpages/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 install -p -m0644 debian/manpages/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 install -p -m0644 debian/manpages/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 install -p -m0644 debian/manpages/cmtk.1 debian/cmtk/usr/share/man/man1/cmtk.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 man-recode --to-code UTF-8 --suffix .dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 mv debian/cmtk/usr/share/man/man1/cmtk-statistics.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-statistics.1 mv debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 mv debian/cmtk/usr/share/man/man1/cmtk-streamxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-sympl.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sympl.1 mv debian/cmtk/usr/share/man/man1/cmtk-symplx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-symplx.1 mv debian/cmtk/usr/share/man/man1/cmtk-ttest.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-ttest.1 mv debian/cmtk/usr/share/man/man1/cmtk-unsplit.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 mv debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 mv debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 mv debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 mv debian/cmtk/usr/share/man/man1/cmtk-warpx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-warpx.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 mv debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 mv debian/cmtk/usr/share/man/man1/cmtk.1.dh-new debian/cmtk/usr/share/man/man1/cmtk.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-statistics.1 debian/cmtk/usr/share/man/man1/cmtk-stream_pixels.1 debian/cmtk/usr/share/man/man1/cmtk-streamxform.1 debian/cmtk/usr/share/man/man1/cmtk-sympl.1 debian/cmtk/usr/share/man/man1/cmtk-symplx.1 debian/cmtk/usr/share/man/man1/cmtk-ttest.1 debian/cmtk/usr/share/man/man1/cmtk-unsplit.1 debian/cmtk/usr/share/man/man1/cmtk-unwarp_image_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-vol2csv.1 debian/cmtk/usr/share/man/man1/cmtk-volume_injection.1 debian/cmtk/usr/share/man/man1/cmtk-volume_reconstruction.1 debian/cmtk/usr/share/man/man1/cmtk-vtkxform.1 debian/cmtk/usr/share/man/man1/cmtk-warp.1 debian/cmtk/usr/share/man/man1/cmtk-warp2ps.1 debian/cmtk/usr/share/man/man1/cmtk-warpx.1 debian/cmtk/usr/share/man/man1/cmtk-xform2dfield.1 debian/cmtk/usr/share/man/man1/cmtk-xform2itk.1 debian/cmtk/usr/share/man/man1/cmtk-xform2scalar.1 debian/cmtk/usr/share/man/man1/cmtk.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 mv debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 mv debian/cmtk/usr/share/man/man1/cmtk-geomatch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 mv debian/cmtk/usr/share/man/man1/cmtk-glm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-glm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gmm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gmm.1 mv debian/cmtk/usr/share/man/man1/cmtk-gregxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 mv debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 mv debian/cmtk/usr/share/man/man1/cmtk-histogram.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-histogram.1 mv debian/cmtk/usr/share/man/man1/cmtk-imagemath.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 mv debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 mv debian/cmtk/usr/share/man/man1/cmtk-jidb.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-jidb.1 mv debian/cmtk/usr/share/man/man1/cmtk-levelset.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-levelset.1 mv debian/cmtk/usr/share/man/man1/cmtk-lmsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lsba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lsba.1 mv debian/cmtk/usr/share/man/man1/cmtk-lvote.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-lvote.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-fit_affine_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform.1 debian/cmtk/usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_dfield.1 debian/cmtk/usr/share/man/man1/cmtk-fit_spline_xform.1 debian/cmtk/usr/share/man/man1/cmtk-geomatch.1 debian/cmtk/usr/share/man/man1/cmtk-glm.1 debian/cmtk/usr/share/man/man1/cmtk-gmm.1 debian/cmtk/usr/share/man/man1/cmtk-gregxform.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_affine.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_init.1 debian/cmtk/usr/share/man/man1/cmtk-groupwise_warp.1 debian/cmtk/usr/share/man/man1/cmtk-hausdorff.1 debian/cmtk/usr/share/man/man1/cmtk-histogram.1 debian/cmtk/usr/share/man/man1/cmtk-imagemath.1 debian/cmtk/usr/share/man/man1/cmtk-interleaved_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-iterative_shape_averaging.1 debian/cmtk/usr/share/man/man1/cmtk-jidb.1 debian/cmtk/usr/share/man/man1/cmtk-levelset.1 debian/cmtk/usr/share/man/man1/cmtk-lmsba.1 debian/cmtk/usr/share/man/man1/cmtk-lsba.1 debian/cmtk/usr/share/man/man1/cmtk-lvote.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment.1 mv debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_images.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_images.1 mv debian/cmtk/usr/share/man/man1/cmtk-average_labels.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 mv debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 mv debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 mv debian/cmtk/usr/share/man/man1/cmtk-convertx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-convertx.1 mv debian/cmtk/usr/share/man/man1/cmtk-dbtool.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 mv debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-describe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-describe.1 mv debian/cmtk/usr/share/man/man1/cmtk-destripe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-destripe.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 mv debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 mv debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-fib2image.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 mv debian/cmtk/usr/share/man/man1/cmtk-fibxform.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 mv debian/cmtk/usr/share/man/man1/cmtk-film.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-film.1 mv debian/cmtk/usr/share/man/man1/cmtk-filter.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-filter.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-asegment.1 debian/cmtk/usr/share/man/man1/cmtk-asegment_sri24.1 debian/cmtk/usr/share/man/man1/cmtk-average_affine.1 debian/cmtk/usr/share/man/man1/cmtk-average_images.1 debian/cmtk/usr/share/man/man1/cmtk-average_labels.1 debian/cmtk/usr/share/man/man1/cmtk-avg_adm.1 debian/cmtk/usr/share/man/man1/cmtk-concat_affine.1 debian/cmtk/usr/share/man/man1/cmtk-convert_warp.1 debian/cmtk/usr/share/man/man1/cmtk-convertx.1 debian/cmtk/usr/share/man/man1/cmtk-dbtool.1 debian/cmtk/usr/share/man/man1/cmtk-dcm2image.1 debian/cmtk/usr/share/man/man1/cmtk-describe.1 debian/cmtk/usr/share/man/man1/cmtk-destripe.1 debian/cmtk/usr/share/man/man1/cmtk-detect_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 debian/cmtk/usr/share/man/man1/cmtk-dof2mat.1 debian/cmtk/usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 debian/cmtk/usr/share/man/man1/cmtk-epiunwarp.1 debian/cmtk/usr/share/man/man1/cmtk-fib2image.1 debian/cmtk/usr/share/man/man1/cmtk-fibxform.1 debian/cmtk/usr/share/man/man1/cmtk-film.1 debian/cmtk/usr/share/man/man1/cmtk-filter.1 mv debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 mv debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 mv debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 mv debian/cmtk/usr/share/man/man1/cmtk-mrbias.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 mv debian/cmtk/usr/share/man/man1/cmtk-overlap.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-overlap.1 mv debian/cmtk/usr/share/man/man1/cmtk-probe.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-probe.1 mv debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 mv debian/cmtk/usr/share/man/man1/cmtk-reformatx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 mv debian/cmtk/usr/share/man/man1/cmtk-registration.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registration.1 mv debian/cmtk/usr/share/man/man1/cmtk-registrationx.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 mv debian/cmtk/usr/share/man/man1/cmtk-regress.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-regress.1 mv debian/cmtk/usr/share/man/man1/cmtk-reorient.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-reorient.1 mv debian/cmtk/usr/share/man/man1/cmtk-sba.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sba.1 mv debian/cmtk/usr/share/man/man1/cmtk-sbai.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sbai.1 mv debian/cmtk/usr/share/man/man1/cmtk-sequence.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-sequence.1 mv debian/cmtk/usr/share/man/man1/cmtk-similarity.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-similarity.1 mv debian/cmtk/usr/share/man/man1/cmtk-split.1.dh-new debian/cmtk/usr/share/man/man1/cmtk-split.1 chmod 0644 -- debian/cmtk/usr/share/man/man1/cmtk-make_initial_affine.1 debian/cmtk/usr/share/man/man1/cmtk-mat2dof.1 debian/cmtk/usr/share/man/man1/cmtk-mcaffine.1 debian/cmtk/usr/share/man/man1/cmtk-mcwarp.1 debian/cmtk/usr/share/man/man1/cmtk-mk_adni_phantom.1 debian/cmtk/usr/share/man/man1/cmtk-mk_analyze_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_nifti_hdr.1 debian/cmtk/usr/share/man/man1/cmtk-mk_phantom_3d.1 debian/cmtk/usr/share/man/man1/cmtk-mrbias.1 debian/cmtk/usr/share/man/man1/cmtk-overlap.1 debian/cmtk/usr/share/man/man1/cmtk-probe.1 debian/cmtk/usr/share/man/man1/cmtk-pxsearch.1 debian/cmtk/usr/share/man/man1/cmtk-reformatx.1 debian/cmtk/usr/share/man/man1/cmtk-registration.1 debian/cmtk/usr/share/man/man1/cmtk-registrationx.1 debian/cmtk/usr/share/man/man1/cmtk-regress.1 debian/cmtk/usr/share/man/man1/cmtk-reorient.1 debian/cmtk/usr/share/man/man1/cmtk-sba.1 debian/cmtk/usr/share/man/man1/cmtk-sbai.1 debian/cmtk/usr/share/man/man1/cmtk-sequence.1 debian/cmtk/usr/share/man/man1/cmtk-similarity.1 debian/cmtk/usr/share/man/man1/cmtk-split.1 make[1]: Leaving directory '/<>/cmtk-3.3.1p1+dfsg' dh_perl dh_link dh_strip_nondeterminism dh_compress cd debian/cmtk chmod a-x usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 gzip -9nf usr/share/doc/cmtk/changelog.Debian usr/share/man/man1/cmtk-asegment.1 usr/share/man/man1/cmtk-asegment_sri24.1 usr/share/man/man1/cmtk-average_affine.1 usr/share/man/man1/cmtk-average_images.1 usr/share/man/man1/cmtk-average_labels.1 usr/share/man/man1/cmtk-avg_adm.1 usr/share/man/man1/cmtk-concat_affine.1 usr/share/man/man1/cmtk-convert_warp.1 usr/share/man/man1/cmtk-convertx.1 usr/share/man/man1/cmtk-dbtool.1 usr/share/man/man1/cmtk-dcm2image.1 usr/share/man/man1/cmtk-describe.1 usr/share/man/man1/cmtk-destripe.1 usr/share/man/man1/cmtk-detect_adni_phantom.1 usr/share/man/man1/cmtk-detect_spheres_matched_filter.1 usr/share/man/man1/cmtk-dof2mat.1 usr/share/man/man1/cmtk-dwi_mask_bad_slices.1 usr/share/man/man1/cmtk-epiunwarp.1 usr/share/man/man1/cmtk-fib2image.1 usr/share/man/man1/cmtk-fibxform.1 usr/share/man/man1/cmtk-film.1 usr/share/man/man1/cmtk-filter.1 usr/share/man/man1/cmtk-fit_affine_dfield.1 usr/share/man/man1/cmtk-fit_affine_xform.1 usr/share/man/man1/cmtk-fit_affine_xform_landmarks.1 usr/share/man/man1/cmtk-fit_spline_dfield.1 usr/share/man/man1/cmtk-fit_spline_xform.1 usr/share/man/man1/cmtk-geomatch.1 usr/share/man/man1/cmtk-glm.1 usr/share/man/man1/cmtk-gmm.1 usr/share/man/man1/cmtk-gregxform.1 usr/share/man/man1/cmtk-groupwise_affine.1 usr/share/man/man1/cmtk-groupwise_init.1 usr/share/man/man1/cmtk-groupwise_warp.1 usr/share/man/man1/cmtk-hausdorff.1 usr/share/man/man1/cmtk-histogram.1 usr/share/man/man1/cmtk-imagemath.1 usr/share/man/man1/cmtk-interleaved_bad_slices.1 usr/share/man/man1/cmtk-iterative_shape_averaging.1 usr/share/man/man1/cmtk-jidb.1 usr/share/man/man1/cmtk-levelset.1 usr/share/man/man1/cmtk-lmsba.1 usr/share/man/man1/cmtk-lsba.1 usr/share/man/man1/cmtk-lvote.1 usr/share/man/man1/cmtk-make_initial_affine.1 usr/share/man/man1/cmtk-mat2dof.1 usr/share/man/man1/cmtk-mcaffine.1 usr/share/man/man1/cmtk-mcwarp.1 usr/share/man/man1/cmtk-mk_adni_phantom.1 usr/share/man/man1/cmtk-mk_analyze_hdr.1 usr/share/man/man1/cmtk-mk_nifti_hdr.1 usr/share/man/man1/cmtk-mk_phantom_3d.1 usr/share/man/man1/cmtk-mrbias.1 usr/share/man/man1/cmtk-overlap.1 usr/share/man/man1/cmtk-probe.1 usr/share/man/man1/cmtk-pxsearch.1 usr/share/man/man1/cmtk-reformatx.1 usr/share/man/man1/cmtk-registration.1 usr/share/man/man1/cmtk-registrationx.1 usr/share/man/man1/cmtk-regress.1 usr/share/man/man1/cmtk-reorient.1 usr/share/man/man1/cmtk-sba.1 usr/share/man/man1/cmtk-sbai.1 usr/share/man/man1/cmtk-sequence.1 usr/share/man/man1/cmtk-similarity.1 usr/share/man/man1/cmtk-split.1 usr/share/man/man1/cmtk-statistics.1 usr/share/man/man1/cmtk-stream_pixels.1 usr/share/man/man1/cmtk-streamxform.1 usr/share/man/man1/cmtk-sympl.1 usr/share/man/man1/cmtk-symplx.1 usr/share/man/man1/cmtk-ttest.1 usr/share/man/man1/cmtk-unsplit.1 usr/share/man/man1/cmtk-unwarp_image_phantom.1 usr/share/man/man1/cmtk-vol2csv.1 usr/share/man/man1/cmtk-volume_injection.1 usr/share/man/man1/cmtk-volume_reconstruction.1 usr/share/man/man1/cmtk-vtkxform.1 usr/share/man/man1/cmtk-warp.1 usr/share/man/man1/cmtk-warp2ps.1 usr/share/man/man1/cmtk-warpx.1 usr/share/man/man1/cmtk-xform2dfield.1 usr/share/man/man1/cmtk-xform2itk.1 usr/share/man/man1/cmtk-xform2scalar.1 usr/share/man/man1/cmtk.1 cd '/<>/cmtk-3.3.1p1+dfsg' dh_fixperms find debian/cmtk -true -print0 2>/dev/null | xargs -0r chown --no-dereference 0:0 find debian/cmtk ! -type l -a -true -a -true -print0 2>/dev/null | xargs -0r chmod go=rX,u+rw,a-s find debian/cmtk/usr/share/doc -type f -a -true -a ! -regex 'debian/cmtk/usr/share/doc/[^/]*/examples/.*' -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/share/doc -type d -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0755 find debian/cmtk/usr/share/man -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk -type f \( -name '*.so.*' -o -name '*.so' -o -name '*.la' -o -name '*.a' -o -name '*.js' -o -name '*.css' -o -name '*.scss' -o -name '*.sass' -o -name '*.jpeg' -o -name '*.jpg' -o -name '*.png' -o -name '*.gif' -o -name '*.cmxs' -o -name '*.node' \) -a -true -a -true -print0 2>/dev/null | xargs -0r chmod 0644 find debian/cmtk/usr/bin -type f -a -true -a -true -print0 2>/dev/null | xargs -0r chmod a+x find debian/cmtk/usr/lib -type f -name '*.ali' -a -true -a -true -print0 2>/dev/null | xargs -0r chmod uga-w dh_missing dh_dwz install -d debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu dwz -mdebian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -M/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug -- debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so dwz: debian/cmtk/usr/lib/cmtk/libNrrdIO.so: DWARF compression not beneficial - old size 188467 new size 190321 objcopy --compress-debug-sections debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu/cmtk.debug dh_strip install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/b181edfee24d89153e21db03782b3c72a83ecd.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/b181edfee24d89153e21db03782b3c72a83ecd.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/b181edfee24d89153e21db03782b3c72a83ecd.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/b181edfee24d89153e21db03782b3c72a83ecd.debug debian/cmtk/usr/lib/cmtk/libcmtkIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/492e5687d80f9c3e76452fbd6b6049f65204fc.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/492e5687d80f9c3e76452fbd6b6049f65204fc.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/492e5687d80f9c3e76452fbd6b6049f65204fc.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/05/492e5687d80f9c3e76452fbd6b6049f65204fc.debug debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/38 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/38/cb9d5882dbf558e83025ab1e64817f4ab215ab.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/38/cb9d5882dbf558e83025ab1e64817f4ab215ab.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/38/cb9d5882dbf558e83025ab1e64817f4ab215ab.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/38/cb9d5882dbf558e83025ab1e64817f4ab215ab.debug debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/027e4289f473f8a7931d1e305f516fac7c723a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/027e4289f473f8a7931d1e305f516fac7c723a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/027e4289f473f8a7931d1e305f516fac7c723a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRecon.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/9d/027e4289f473f8a7931d1e305f516fac7c723a.debug debian/cmtk/usr/lib/cmtk/libcmtkRecon.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/4702fd4f8684df9a199082bea927cd13269b30.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/4702fd4f8684df9a199082bea927cd13269b30.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/4702fd4f8684df9a199082bea927cd13269b30.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkSystem.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ea/4702fd4f8684df9a199082bea927cd13269b30.debug debian/cmtk/usr/lib/cmtk/libcmtkSystem.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/a9a966e8e888bea12475a4a478298341e4eb7e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/a9a966e8e888bea12475a4a478298341e4eb7e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/a9a966e8e888bea12475a4a478298341e4eb7e.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkMxml.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0f/a9a966e8e888bea12475a4a478298341e4eb7e.debug debian/cmtk/usr/lib/cmtk/libcmtkMxml.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/139edf17816dfd6d220a764b99233cd6a30a57.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/139edf17816dfd6d220a764b99233cd6a30a57.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/139edf17816dfd6d220a764b99233cd6a30a57.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libNrrdIO.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ed/139edf17816dfd6d220a764b99233cd6a30a57.debug debian/cmtk/usr/lib/cmtk/libNrrdIO.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/76 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/76/51e3aa29b8a1aba93f8ed3babb1694d5e05d87.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/76/51e3aa29b8a1aba93f8ed3babb1694d5e05d87.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/76/51e3aa29b8a1aba93f8ed3babb1694d5e05d87.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/76/51e3aa29b8a1aba93f8ed3babb1694d5e05d87.debug debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/106bcd7bafea88797b2e408af5edc832333b1a.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/106bcd7bafea88797b2e408af5edc832333b1a.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/106bcd7bafea88797b2e408af5edc832333b1a.debug strip --remove-section=.comment --remove-section=.note --strip-unneeded debian/cmtk/usr/lib/cmtk/libcmtkBase.so objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/80/106bcd7bafea88797b2e408af5edc832333b1a.debug debian/cmtk/usr/lib/cmtk/libcmtkBase.so install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gregxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/4492dd83ccf7fd806d2c994f0260ec14de00fe.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/4492dd83ccf7fd806d2c994f0260ec14de00fe.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/4492dd83ccf7fd806d2c994f0260ec14de00fe.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gregxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/35/4492dd83ccf7fd806d2c994f0260ec14de00fe.debug debian/cmtk/usr/lib/cmtk/bin/gregxform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3140ed8e8e0c6a38e0cb0b35e70fe70a6e8df2.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3140ed8e8e0c6a38e0cb0b35e70fe70a6e8df2.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3140ed8e8e0c6a38e0cb0b35e70fe70a6e8df2.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/f0/3140ed8e8e0c6a38e0cb0b35e70fe70a6e8df2.debug debian/cmtk/usr/lib/cmtk/bin/lsba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/9f7540d5c5a3817ac4f57c849585b7069839e8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/9f7540d5c5a3817ac4f57c849585b7069839e8.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/9f7540d5c5a3817ac4f57c849585b7069839e8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/avg_adm objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6e/9f7540d5c5a3817ac4f57c849585b7069839e8.debug debian/cmtk/usr/lib/cmtk/bin/avg_adm install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/convertx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/0054e8bc85251ed4ab37df24f157b9bc330c99.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/0054e8bc85251ed4ab37df24f157b9bc330c99.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/0054e8bc85251ed4ab37df24f157b9bc330c99.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/convertx objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/68/0054e8bc85251ed4ab37df24f157b9bc330c99.debug debian/cmtk/usr/lib/cmtk/bin/convertx install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/d00f6ed06b549b93b512766ab9264de88f5bba.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/d00f6ed06b549b93b512766ab9264de88f5bba.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/d00f6ed06b549b93b512766ab9264de88f5bba.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/d00f6ed06b549b93b512766ab9264de88f5bba.debug debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/fibxform debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/c824878430ececd11cb3029ef91848e0b861f2.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/c824878430ececd11cb3029ef91848e0b861f2.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/c824878430ececd11cb3029ef91848e0b861f2.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/fibxform objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/6c/c824878430ececd11cb3029ef91848e0b861f2.debug debian/cmtk/usr/lib/cmtk/bin/fibxform install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/aa objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/aa/f50fb24bfb7c580f230651736c19e9d222dbdf.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/aa/f50fb24bfb7c580f230651736c19e9d222dbdf.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/aa/f50fb24bfb7c580f230651736c19e9d222dbdf.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/aa/f50fb24bfb7c580f230651736c19e9d222dbdf.debug debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/1a29acf9d9fa791056ae81a7200826923ea1b3.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/1a29acf9d9fa791056ae81a7200826923ea1b3.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/1a29acf9d9fa791056ae81a7200826923ea1b3.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/40/1a29acf9d9fa791056ae81a7200826923ea1b3.debug debian/cmtk/usr/lib/cmtk/bin/average_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/warpx debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/d40e95f20d4aad1e395598b86ce00df1b6d24b.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/3f/d40e95f20d4aad1e395598b86ce00df1b6d24b.debug chown 0:0 -- 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--compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/39e545f00b1173e7a91809651bdfaae23c7130.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/39e545f00b1173e7a91809651bdfaae23c7130.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/39e545f00b1173e7a91809651bdfaae23c7130.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/29/39e545f00b1173e7a91809651bdfaae23c7130.debug debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c3 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom 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debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/sympl debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/8e949faf238c65ca212255faa4b2f0d0a5ec0e.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/8e949faf238c65ca212255faa4b2f0d0a5ec0e.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/8e949faf238c65ca212255faa4b2f0d0a5ec0e.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sympl objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/0e/8e949faf238c65ca212255faa4b2f0d0a5ec0e.debug debian/cmtk/usr/lib/cmtk/bin/sympl install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/36 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/concat_affine 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--remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/sba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/37/0aa6a5988bee82beb62f28fd1a3facc1c88ed1.debug debian/cmtk/usr/lib/cmtk/bin/sba install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/77 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/describe debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/77/5c160081f8d67257a6436894721ac2912ac47f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/77/5c160081f8d67257a6436894721ac2912ac47f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/77/5c160081f8d67257a6436894721ac2912ac47f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/describe objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/77/5c160081f8d67257a6436894721ac2912ac47f.debug debian/cmtk/usr/lib/cmtk/bin/describe objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/lmsba debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/6415de1dc781a3ffd810996b538dae3ba3c029.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/6415de1dc781a3ffd810996b538dae3ba3c029.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/6415de1dc781a3ffd810996b538dae3ba3c029.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/lmsba objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/06/6415de1dc781a3ffd810996b538dae3ba3c029.debug debian/cmtk/usr/lib/cmtk/bin/lmsba objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/average_images debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/3ec5ad8558bff4ad775d7f1a09fc0be6b7a915.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/3ec5ad8558bff4ad775d7f1a09fc0be6b7a915.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/3ec5ad8558bff4ad775d7f1a09fc0be6b7a915.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/average_images objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/01/3ec5ad8558bff4ad775d7f1a09fc0be6b7a915.debug debian/cmtk/usr/lib/cmtk/bin/average_images objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/be92ca43293153323429efef9692d60a936af8.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/be92ca43293153323429efef9692d60a936af8.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/be92ca43293153323429efef9692d60a936af8.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/groupwise_warp objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/ca/be92ca43293153323429efef9692d60a936af8.debug debian/cmtk/usr/lib/cmtk/bin/groupwise_warp install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/9129259ea41605997b2da6d4bb7e97a4d8db82.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/9129259ea41605997b2da6d4bb7e97a4d8db82.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/9129259ea41605997b2da6d4bb7e97a4d8db82.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c6/9129259ea41605997b2da6d4bb7e97a4d8db82.debug debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/ttest debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/7569ed3588a0e1868357bdc14789a9150b5bce.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/7569ed3588a0e1868357bdc14789a9150b5bce.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/7569ed3588a0e1868357bdc14789a9150b5bce.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/ttest objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/95/7569ed3588a0e1868357bdc14789a9150b5bce.debug debian/cmtk/usr/lib/cmtk/bin/ttest install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/ff5d89b98678485d605395b833164d84f692fb.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/ff5d89b98678485d605395b833164d84f692fb.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/ff5d89b98678485d605395b833164d84f692fb.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/make_initial_affine objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/cf/ff5d89b98678485d605395b833164d84f692fb.debug debian/cmtk/usr/lib/cmtk/bin/make_initial_affine install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1 objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/gmm debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/53604558520ed089ac94bf0231608aa405646f.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/53604558520ed089ac94bf0231608aa405646f.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/53604558520ed089ac94bf0231608aa405646f.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/gmm objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/c1/53604558520ed089ac94bf0231608aa405646f.debug debian/cmtk/usr/lib/cmtk/bin/gmm objcopy --only-keep-debug --compress-debug-sections debian/cmtk/usr/lib/cmtk/bin/hausdorff debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/c57136c6e08033cfcf4d862e062cf9efd51136.debug chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/c57136c6e08033cfcf4d862e062cf9efd51136.debug chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/c57136c6e08033cfcf4d862e062cf9efd51136.debug strip --remove-section=.comment --remove-section=.note debian/cmtk/usr/lib/cmtk/bin/hausdorff objcopy --add-gnu-debuglink debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.build-id/d2/c57136c6e08033cfcf4d862e062cf9efd51136.debug debian/cmtk/usr/lib/cmtk/bin/hausdorff install -d debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz cp --reflink=auto -a debian/cmtk/usr/lib/debug/.dwz/x86_64-linux-gnu debian/.debhelper/cmtk/dbgsym-root/usr/lib/debug/.dwz rm -fr debian/cmtk/usr/lib/debug/.dwz rmdir -p --ignore-fail-on-non-empty debian/cmtk/usr/lib/debug install -d debian/.debhelper/cmtk/dbgsym-root/usr/share/doc ln -s cmtk debian/.debhelper/cmtk/dbgsym-root/usr/share/doc/cmtk-dbgsym dh_makeshlibs rm -f debian/cmtk/DEBIAN/shlibs dh_shlibdeps install -d debian/cmtk/DEBIAN dpkg-shlibdeps -Tdebian/cmtk.substvars debian/cmtk/usr/lib/cmtk/libcmtkIO.so debian/cmtk/usr/lib/cmtk/libcmtkNumerics.so debian/cmtk/usr/lib/cmtk/libcmtkSegmentation.so debian/cmtk/usr/lib/cmtk/libcmtkRecon.so debian/cmtk/usr/lib/cmtk/libcmtkSystem.so debian/cmtk/usr/lib/cmtk/libcmtkMxml.so debian/cmtk/usr/lib/cmtk/libNrrdIO.so debian/cmtk/usr/lib/cmtk/libcmtkRegistration.so debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/gregxform debian/cmtk/usr/lib/cmtk/bin/lsba debian/cmtk/usr/lib/cmtk/bin/avg_adm debian/cmtk/usr/lib/cmtk/bin/convertx debian/cmtk/usr/lib/cmtk/bin/interleaved_bad_slices debian/cmtk/usr/lib/cmtk/bin/fibxform debian/cmtk/usr/lib/cmtk/bin/detect_adni_phantom debian/cmtk/usr/lib/cmtk/bin/average_affine debian/cmtk/usr/lib/cmtk/bin/warpx debian/cmtk/usr/lib/cmtk/bin/sequence debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform_landmarks debian/cmtk/usr/lib/cmtk/bin/overlap debian/cmtk/usr/lib/cmtk/bin/dcm2image debian/cmtk/usr/lib/cmtk/bin/mcwarp debian/cmtk/usr/lib/cmtk/bin/vol2csv debian/cmtk/usr/lib/cmtk/bin/levelset debian/cmtk/usr/lib/cmtk/bin/volume_reconstruction debian/cmtk/usr/lib/cmtk/bin/split debian/cmtk/usr/lib/cmtk/bin/lvote debian/cmtk/usr/lib/cmtk/bin/regress debian/cmtk/usr/lib/cmtk/bin/xform2scalar debian/cmtk/usr/lib/cmtk/bin/mat2dof debian/cmtk/usr/lib/cmtk/bin/reformatx debian/cmtk/usr/lib/cmtk/bin/pxsearch debian/cmtk/usr/lib/cmtk/bin/histogram debian/cmtk/usr/lib/cmtk/bin/warp2ps debian/cmtk/usr/lib/cmtk/bin/imagemath debian/cmtk/usr/lib/cmtk/bin/glm debian/cmtk/usr/lib/cmtk/bin/dwi_mask_bad_slices debian/cmtk/usr/lib/cmtk/bin/registrationx debian/cmtk/usr/lib/cmtk/bin/sbai debian/cmtk/usr/lib/cmtk/bin/groupwise_init debian/cmtk/usr/lib/cmtk/bin/statistics debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/bin/film debian/cmtk/usr/lib/cmtk/bin/convert_warp debian/cmtk/usr/lib/cmtk/bin/streamxform debian/cmtk/usr/lib/cmtk/bin/vtkxform debian/cmtk/usr/lib/cmtk/bin/fit_affine_xform debian/cmtk/usr/lib/cmtk/bin/groupwise_affine debian/cmtk/usr/lib/cmtk/bin/mk_adni_phantom debian/cmtk/usr/lib/cmtk/bin/asegment debian/cmtk/usr/lib/cmtk/bin/xform2dfield debian/cmtk/usr/lib/cmtk/bin/volume_injection debian/cmtk/usr/lib/cmtk/bin/destripe debian/cmtk/usr/lib/cmtk/bin/fit_spline_dfield debian/cmtk/usr/lib/cmtk/bin/dbtool debian/cmtk/usr/lib/cmtk/bin/mk_phantom_3d debian/cmtk/usr/lib/cmtk/bin/reorient debian/cmtk/usr/lib/cmtk/bin/jidb debian/cmtk/usr/lib/cmtk/bin/average_labels debian/cmtk/usr/lib/cmtk/bin/epiunwarp debian/cmtk/usr/lib/cmtk/bin/fit_spline_xform debian/cmtk/usr/lib/cmtk/bin/detect_spheres_matched_filter debian/cmtk/usr/lib/cmtk/bin/unwarp_image_phantom debian/cmtk/usr/lib/cmtk/bin/stream_pixels debian/cmtk/usr/lib/cmtk/bin/dof2mat debian/cmtk/usr/lib/cmtk/bin/similarity debian/cmtk/usr/lib/cmtk/bin/xform2itk debian/cmtk/usr/lib/cmtk/bin/sympl debian/cmtk/usr/lib/cmtk/bin/concat_affine debian/cmtk/usr/lib/cmtk/bin/unsplit debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mcaffine debian/cmtk/usr/lib/cmtk/bin/geomatch debian/cmtk/usr/lib/cmtk/bin/mrbias debian/cmtk/usr/lib/cmtk/bin/filter debian/cmtk/usr/lib/cmtk/bin/fib2image debian/cmtk/usr/lib/cmtk/bin/warp debian/cmtk/usr/lib/cmtk/bin/fit_affine_dfield debian/cmtk/usr/lib/cmtk/bin/registration debian/cmtk/usr/lib/cmtk/bin/probe debian/cmtk/usr/lib/cmtk/bin/symplx debian/cmtk/usr/lib/cmtk/bin/sba debian/cmtk/usr/lib/cmtk/bin/describe debian/cmtk/usr/lib/cmtk/bin/lmsba debian/cmtk/usr/lib/cmtk/bin/average_images debian/cmtk/usr/lib/cmtk/bin/groupwise_warp debian/cmtk/usr/lib/cmtk/bin/asegment_sri24 debian/cmtk/usr/lib/cmtk/bin/ttest debian/cmtk/usr/lib/cmtk/bin/make_initial_affine debian/cmtk/usr/lib/cmtk/bin/gmm debian/cmtk/usr/lib/cmtk/bin/hausdorff dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libcmtkMxml.so contains an unresolvable reference to symbol pthread_getspecific: it's probably a plugin dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libNrrdIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: debian/cmtk/usr/lib/cmtk/libNrrdIO.so contains an unresolvable reference to symbol sqrt: it's probably a plugin dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRecon.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkNumerics.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSegmentation.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkRegistration.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkIO.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkBase.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkSystem.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: can't extract name and version from library name 'libcmtkMxml.so' dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/cmtk/usr/lib/cmtk/bin/mk_nifti_hdr debian/cmtk/usr/lib/cmtk/bin/mk_analyze_hdr debian/cmtk/usr/lib/cmtk/libcmtkBase.so debian/cmtk/usr/lib/cmtk/bin/sequence were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) dh_installdeb find debian/cmtk/etc -type f -printf '/etc/%P ' | LC_ALL=C sort >> debian/cmtk/DEBIAN/conffiles chmod 0644 -- debian/cmtk/DEBIAN/conffiles chown 0:0 -- debian/cmtk/DEBIAN/conffiles dh_gencontrol echo misc:Depends= >> debian/cmtk.substvars echo misc:Pre-Depends= >> debian/cmtk.substvars install -d debian/.debhelper/cmtk/dbgsym-root/DEBIAN dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/.debhelper/cmtk/dbgsym-root -UPre-Depends -URecommends -USuggests -UEnhances -UProvides -UEssential -UConflicts -DPriority=optional -UHomepage -UImportant -UBuilt-Using -DAuto-Built-Package=debug-symbols -DPackage=cmtk-dbgsym "-DDepends=cmtk (= \${binary:Version})" "-DDescription=debug symbols for cmtk" "-DBuild-Ids=01176657a0ccae29e507fa509643153b13b86d29 013ec5ad8558bff4ad775d7f1a09fc0be6b7a915 01aa54f6166391a1a6ef5512a253780a13e1dfb3 05492e5687d80f9c3e76452fbd6b6049f65204fc 0641e785aa032a2f0483137d03aaf7b8ba2e96a8 066415de1dc781a3ffd810996b538dae3ba3c029 09b555e8c84241037dc540c32a286c4e94808f35 0e8e949faf238c65ca212255faa4b2f0d0a5ec0e 0fa9a966e8e888bea12475a4a478298341e4eb7e 10730d5f255ad39c86720b2c561fb72f8adfd648 11e501163665b8d20b17459cad50c9d80c98b360 11f876591d9e25f00cddb5abe36eac8186c6daad 16302440432cb8090e9c33f5ac15f7d6963b591b 25b5f7e7b76efa7fed5e75646ca1fb63a65f0dc3 2939e545f00b1173e7a91809651bdfaae23c7130 29df76372cb2fb8bf24ac5bb5696752cdda3ffe1 2ad5d34c2cc68dd101bff20c1f79ea4707c374aa 2de4a839bc3eb83de1ac8fe42cb96e7c577135c5 2ff5a1bce0caf1dae62731d3d2402a09e9fd868a 312a503dc5a0c414eb2647d34aeeb7374e8a3efa 31ed6462bf049c4f916e5c248beb99f46fb3b363 32e76de4675b4c0f739fd900f4aea5701d47a459 33afcd3846764639874119cc8fc80a1941fd40fb 354492dd83ccf7fd806d2c994f0260ec14de00fe 3677889909a8fb190a22912011169079ec7c64bd 370aa6a5988bee82beb62f28fd1a3facc1c88ed1 38cb9d5882dbf558e83025ab1e64817f4ab215ab 3fd40e95f20d4aad1e395598b86ce00df1b6d24b 401a29acf9d9fa791056ae81a7200826923ea1b3 41c7da6018e486dfa4c5f371a3abf519a6a67ab3 4288ccca17b643c59107e03fa106cb2bd231ba9d 42e4487c44724e1a81716125573081e074bac443 45d37065d122632603e5619b29b2e3cd2da07c50 4cac94590ea9926cbaa9f8c1882dbdc7db4c4488 514862e896466a4e8c15c6b9afbc4953f8cf9c68 5282d077a79e0bd565f7f324d793ea1681f04157 5384baf8cd0f8d6a21c318bb0fd3939d6f6aa6f2 53b1539e2b11c714065b352a0dc82668effffc2a 566fbe3c471ce3b9adaf09935eb13e745c7e5b3c 5a344f2e704d9b1deb24fe4cb55bda6d75169c12 670fecd4260318f3872b8e23088caff186e31430 680054e8bc85251ed4ab37df24f157b9bc330c99 6cc824878430ececd11cb3029ef91848e0b861f2 6e22f283156b624c577b16514d1bd6e5f1a0a558 6e9f7540d5c5a3817ac4f57c849585b7069839e8 70e4b9272a2a84b565e38dc47e8d86d48c9635da 7129907dc69ac9e488ac137cd9c3d4d0cad32b56 73fcd74ee3f1b0903b8f59c11f0e400a81c14ffa 7651e3aa29b8a1aba93f8ed3babb1694d5e05d87 775c160081f8d67257a6436894721ac2912ac47f 7a6db0bc1d8f024139d95d60646fdf59b0f1d11b 7bba37006645c1adfd1880271d26a1c6b3c32457 7f260c570a8f548c57a8431fd8f3156d10212adf 80106bcd7bafea88797b2e408af5edc832333b1a 893ca2248c8144d0ffd0d92c0abc4baa340d7c20 8ffda0b1286ce795ab4ea01d44a58d512a60d148 903389831829799598098c8b217971d60f101f21 957569ed3588a0e1868357bdc14789a9150b5bce 95b181edfee24d89153e21db03782b3c72a83ecd 9d027e4289f473f8a7931d1e305f516fac7c723a a19f3016094b019adc034a0c17ffa64fb0192bee a681636db801effcfee88b9968ac23160d019a89 aaf50fb24bfb7c580f230651736c19e9d222dbdf ad7a4f91f6a774fff880d3abf8ef5fe006b700a1 ad7f514f2ecca875e3d24535e64a92f1c0c0d818 af6d04d4c95dad4f1ecf2092a99156fdf586af92 b040b656c06f333c26b8016bfa23655f32487e12 bbe07762e418013de6f77dc867b57ff6e897d6ae c153604558520ed089ac94bf0231608aa405646f c385c031116b5998ca73f05f01710a6036c07e2b c69129259ea41605997b2da6d4bb7e97a4d8db82 c7e14504cf2f278cd2f80933cee053c40f3fcf0e cabe92ca43293153323429efef9692d60a936af8 cacd603e5f4a0962efcfdf80e2137374a8c195a6 cc111e1a40434cdd5391a6f63322cdee24d7e4c4 ce3601bf2a7c8527dfda53d9b1dc65198f3b2a56 cfff5d89b98678485d605395b833164d84f692fb d2c57136c6e08033cfcf4d862e062cf9efd51136 d2d00f6ed06b549b93b512766ab9264de88f5bba d8ca5ccb52b35319113f868e5903feba38400cb6 da8a6ec8d48865a20c688990be71e1a1ee7a1cf5 ddee47676d377ce044978845904e4b93b9b5ac7c e3575e5abf726d9da7633a0d6c733396e234d682 e874b5be30ecd79ad2d768f8885809cb22753b16 ea4702fd4f8684df9a199082bea927cd13269b30 ebfbe18f39c8ed5f22c70c0f1d2f1e21057e7f90 ed139edf17816dfd6d220a764b99233cd6a30a57 ee8966127b54b800285feae6c630a52442d1f65e eec5b7fe42f2ad86cbb49001dc1e9caa41b69117 f03140ed8e8e0c6a38e0cb0b35e70fe70a6e8df2 f43e0cf68b8a04b59a9f5dc9e87cc2b0c1d9b88b fccc49677cd61eb955785003f77b8fb732099833" -DSection=debug -DPackage-Type=ddeb -UMulti-Arch -UReplaces -UBreaks chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control dpkg-gencontrol -pcmtk -ldebian/changelog -Tdebian/cmtk.substvars -Pdebian/cmtk -UMulti-Arch chmod 0644 -- debian/cmtk/DEBIAN/control chown 0:0 -- debian/cmtk/DEBIAN/control dh_md5sums cd debian/cmtk >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/cmtk/DEBIAN/md5sums chown 0:0 -- debian/cmtk/DEBIAN/md5sums cd debian/.debhelper/cmtk/dbgsym-root >/dev/null && xargs -r0 md5sum | perl -pe 'if (s@^\\@@) { s/\\\\/\\/g; }' > DEBIAN/md5sums chmod 0644 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums chown 0:0 -- debian/.debhelper/cmtk/dbgsym-root/DEBIAN/md5sums dh_builddeb dpkg-deb --build debian/cmtk .. install -d debian/.debhelper/scratch-space/build-cmtk dpkg-deb --build debian/.debhelper/cmtk/dbgsym-root debian/.debhelper/scratch-space/build-cmtk INFO: pkgstriptranslations version 144 INFO: pkgstriptranslations version 144 pkgstriptranslations: processing cmtk (in debian/cmtk); do_strip: , oemstrip: pkgstriptranslations: processing cmtk-dbgsym (in debian/.debhelper/cmtk/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/cmtk/DEBIAN/control, package cmtk, directory debian/cmtk pkgstripfiles: Truncating usr/share/doc/cmtk/changelog.Debian.gz to topmost ten records pkgstripfiles: processing control file: debian/.debhelper/cmtk/dbgsym-root/DEBIAN/control, package cmtk-dbgsym, directory debian/.debhelper/cmtk/dbgsym-root dpkg-deb: building package 'cmtk-dbgsym' in 'debian/.debhelper/scratch-space/build-cmtk/cmtk-dbgsym_3.3.1p1+dfsg-2build1_amd64.deb'. pkgstripfiles: Running PNG optimization (using 4 cpus) for package cmtk ... pkgstripfiles: No PNG files. dpkg-deb: building package 'cmtk' in '../cmtk_3.3.1p1+dfsg-2build1_amd64.deb'. Renaming cmtk-dbgsym_3.3.1p1+dfsg-2build1_amd64.deb to cmtk-dbgsym_3.3.1p1+dfsg-2build1_amd64.ddeb mv debian/.debhelper/scratch-space/build-cmtk/cmtk-dbgsym_3.3.1p1\+dfsg-2build1_amd64.deb ../cmtk-dbgsym_3.3.1p1\+dfsg-2build1_amd64.ddeb dpkg-genbuildinfo --build=binary dpkg-genchanges --build=binary -mLaunchpad Build Daemon >../cmtk_3.3.1p1+dfsg-2build1_amd64.changes dpkg-genchanges: info: binary-only upload (no source code included) dpkg-source --after-build . dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20200323-0705 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ cmtk_3.3.1p1+dfsg-2build1_amd64.changes: ---------------------------------------- Format: 1.8 Date: Mon, 23 Mar 2020 07:11:38 +0100 Source: cmtk Binary: cmtk Architecture: amd64 Version: 3.3.1p1+dfsg-2build1 Distribution: focal-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Matthias Klose Description: cmtk - Computational Morphometry Toolkit Changes: cmtk (3.3.1p1+dfsg-2build1) focal; urgency=medium . * No-change rebuild for libgcc-s1 package name change. Checksums-Sha1: d299b81e395058ffdd365598fd977f2d7f9af678 41311444 cmtk-dbgsym_3.3.1p1+dfsg-2build1_amd64.ddeb 4c8a0c9f5a64f73c5deeb87b2d1ceb2cca3f840a 9639 cmtk_3.3.1p1+dfsg-2build1_amd64.buildinfo e69a77911be51f8fb2cadf4c78128b9a3fadd252 2420676 cmtk_3.3.1p1+dfsg-2build1_amd64.deb Checksums-Sha256: b51ce83e80276fdf48feb545339e3316485d16aa500833de63eda2e5c24d9200 41311444 cmtk-dbgsym_3.3.1p1+dfsg-2build1_amd64.ddeb 82dab54a9fdda7222c35cb059136b12e1ae84b2066a384019e4be60e5cf70bfa 9639 cmtk_3.3.1p1+dfsg-2build1_amd64.buildinfo 9fb9eb60f527a239edac810930e39ccd2ca2bdbe7216eed61a141fa410fecca2 2420676 cmtk_3.3.1p1+dfsg-2build1_amd64.deb Files: 18b3d50f833e08ec3c0d12efe1771604 41311444 debug optional cmtk-dbgsym_3.3.1p1+dfsg-2build1_amd64.ddeb debc3e152bce1b6bcfd585c537d49c66 9639 science optional cmtk_3.3.1p1+dfsg-2build1_amd64.buildinfo 5818e32f29e40cb4cb9b5e41a4a7c297 2420676 science optional cmtk_3.3.1p1+dfsg-2build1_amd64.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ cmtk_3.3.1p1+dfsg-2build1_amd64.deb ----------------------------------- new debian package, version 2.0. size 2420676 bytes: control archive=5752 bytes. 18 bytes, 1 lines conffiles 1146 bytes, 23 lines control 13304 bytes, 195 lines md5sums Package: cmtk Version: 3.3.1p1+dfsg-2build1 Architecture: amd64 Maintainer: Ubuntu Developers Original-Maintainer: NeuroDebian Team Installed-Size: 12617 Depends: libbz2-1.0, libc6 (>= 2.29), libdcmtk14, libfftw3-double3 (>= 3.3.5), libgcc-s1 (>= 3.0), libgomp1 (>= 6), libsqlite3-0 (>= 3.5.9), libstdc++6 (>= 5.2), zlib1g (>= 1:1.1.4) Recommends: sri24-atlas Suggests: numdiff Section: science Priority: optional Homepage: http://www.nitrc.org/projects/cmtk/ Description: Computational Morphometry Toolkit A software toolkit for computational morphometry of biomedical images, CMTK comprises a set of command line tools and a back-end general-purpose library for processing and I/O. . The command line tools primarily provide the following functionality: registration (affine and nonrigid; single and multi-channel; pairwise and groupwise), image correction (MR bias field estimation; interleaved image artifact correction), processing (filters; combination of segmentations via voting and STAPLE; shape-based averaging), statistics (t-tests; general linear regression). drwxr-xr-x root/root 0 2020-03-23 06:11 ./ drwxr-xr-x root/root 0 2020-03-23 06:11 ./etc/ drwxr-xr-x root/root 0 2020-03-23 06:11 ./etc/cmtk/ -rw-r--r-- root/root 359 2019-11-11 10:11 ./etc/cmtk/cmtk.sh drwxr-xr-x root/root 0 2020-03-23 06:11 ./usr/ drwxr-xr-x root/root 0 2020-03-23 06:11 ./usr/bin/ -rwxr-xr-x root/root 1643 2020-03-23 06:11 ./usr/bin/cmtk drwxr-xr-x root/root 0 2020-03-23 06:11 ./usr/lib/ drwxr-xr-x root/root 0 2020-03-23 06:11 ./usr/lib/cmtk/ -rw-r--r-- root/root 3051 2020-03-23 06:11 ./usr/lib/cmtk/CMTKConfig.cmake -rw-r--r-- root/root 2987 2020-03-23 06:11 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./usr/share/man/man1/cmtk-xform2scalar.1.gz -rw-r--r-- root/root 4994 2020-03-23 06:11 ./usr/share/man/man1/cmtk.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: amd64 Build-Space: 1104712 Build-Time: 591 Distribution: focal-proposed Host Architecture: amd64 Install-Time: 117 Job: cmtk_3.3.1p1+dfsg-2build1.dsc Machine Architecture: amd64 Package: cmtk Package-Time: 710 Source-Version: 3.3.1p1+dfsg-2build1 Space: 1104712 Status: successful Version: 3.3.1p1+dfsg-2build1 -------------------------------------------------------------------------------- Finished at 20200323-0705 Build needed 00:11:50, 1104712k disc space RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=focal --arch=amd64 PACKAGEBUILD-18878160 Scanning for processes to kill in build PACKAGEBUILD-18878160