https://launchpad.net/ubuntu/+source/clustalo/1.2.4-2/+build/15144865 RUN: /usr/share/launchpad-buildd/slavebin/slave-prep Forking launchpad-buildd slave process... Kernel version: Linux bos02-ppc64el-008 4.4.0-128-generic #154-Ubuntu SMP Fri May 25 14:13:59 UTC 2018 ppc64le Buildd toolchain package versions: launchpad-buildd_161 python-lpbuildd_161 sbuild_0.67.0-2ubuntu7.1 bzr-builder_0.7.3+bzr174~ppa13~ubuntu14.10.1 bzr_2.7.0-2ubuntu3.1 git-build-recipe_0.3.4~git201611291343.dcee459~ubuntu16.04.1 git_1:2.7.4-0ubuntu1.4 dpkg-dev_1.18.4ubuntu1.4 python-debian_0.1.27ubuntu2. Syncing the system clock with the buildd NTP service... 18 Jul 23:10:53 ntpdate[1838]: adjust time server 10.211.37.1 offset 0.001294 sec RUN: /usr/share/launchpad-buildd/slavebin/in-target unpack-chroot --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 /home/buildd/filecache-default/eae3490d19bb2e30261b695511cfc7c4419ff6fc Creating target for build PACKAGEBUILD-15144865 RUN: /usr/share/launchpad-buildd/slavebin/in-target mount-chroot --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 Starting target for build PACKAGEBUILD-15144865 RUN: /usr/share/launchpad-buildd/slavebin/in-target override-sources-list --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 'deb http://ftpmaster.internal/ubuntu cosmic main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-security main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-updates main universe' 'deb http://ftpmaster.internal/ubuntu cosmic-proposed main universe' Overriding sources.list in build-PACKAGEBUILD-15144865 RUN: /usr/share/launchpad-buildd/slavebin/in-target update-debian-chroot --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 Updating target for build PACKAGEBUILD-15144865 Get:1 http://ftpmaster.internal/ubuntu cosmic InRelease [242 kB] Get:2 http://ftpmaster.internal/ubuntu cosmic-security InRelease [65.4 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic-updates InRelease [65.4 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic-proposed InRelease [92.5 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main ppc64el Packages [1044 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main Translation-en [524 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/universe ppc64el Packages [8344 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/universe Translation-en [5018 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el Packages [101 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic-proposed/main Translation-en [54.7 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el Packages [396 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic-proposed/universe Translation-en [192 kB] Fetched 16.1 MB in 8s (2049 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following packages were automatically installed and are no longer required: g++-7 libargon2-0 libncursesw5 libprocps6 libstdc++-7-dev Use 'sudo apt autoremove' to remove them. The following NEW packages will be installed: cpp-8 g++-8 gcc-8 libargon2-1 libasan5 libgcc-8-dev libncurses6 libncursesw6 libprocps7 libquadmath0 libstdc++-8-dev libtinfo6 libubsan1 The following packages will be upgraded: adduser apt base-files base-passwd bash binutils binutils-common binutils-powerpc64le-linux-gnu bsdutils build-essential cpp cpp-7 debconf debianutils dpkg dpkg-dev e2fslibs e2fsprogs fdisk g++ g++-7 gcc gcc-7 gcc-7-base gcc-8-base gpg gpg-agent gpgconf gpgv libapparmor1 libapt-pkg5.0 libargon2-0 libasan4 libatomic1 libaudit-common libaudit1 libbinutils libblkid1 libcap-ng0 libcc1-0 libcom-err2 libcomerr2 libcryptsetup12 libdpkg-perl libext2fs2 libfdisk1 libgcc-7-dev libgcc1 libgcrypt20 libgmp10 libgomp1 libgpg-error0 libitm1 libkmod2 liblsan0 liblz4-1 libmount1 libncurses5 libncursesw5 libnpth0 libp11-kit0 libpcre3 libperl5.26 libpng16-16 libreadline7 libseccomp2 libselinux1 libsemanage-common libsemanage1 libsepol1 libslang2 libsmartcols1 libsqlite3-0 libss2 libssl1.1 libstdc++-7-dev libstdc++6 libsystemd0 libtasn1-6 libtinfo5 libtsan0 libubsan0 libudev1 libusb-0.1-4 libuuid1 linux-libc-dev make mount ncurses-base ncurses-bin openssl perl perl-base perl-modules-5.26 pinentry-curses pkgbinarymangler procps readline-common sed systemd systemd-sysv tar tzdata util-linux 104 upgraded, 13 newly installed, 0 to remove and 0 not upgraded. Need to get 80.4 MB of archives. After this operation, 120 MB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu cosmic/main ppc64el base-files ppc64el 10.1ubuntu4 [58.0 kB] Get:2 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libtinfo6 ppc64el 6.1+20180210-4ubuntu1 [95.8 kB] Get:3 http://ftpmaster.internal/ubuntu cosmic/main ppc64el debianutils ppc64el 4.8.6 [85.8 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic/main ppc64el bash ppc64el 4.4.18-2ubuntu2 [680 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic/main ppc64el bsdutils ppc64el 1:2.32-0.1ubuntu1 [62.0 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic/main ppc64el tar ppc64el 1.30+dfsg-2 [268 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic/main ppc64el dpkg ppc64el 1.19.0.5ubuntu3 [1147 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libext2fs2 ppc64el 1.44.3-1 [174 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic/main ppc64el e2fsprogs ppc64el 1.44.3-1 [408 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic/main ppc64el ncurses-bin ppc64el 6.1+20180210-4ubuntu1 [171 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic/main ppc64el perl-modules-5.26 all 5.26.2-6 [2762 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libperl5.26 ppc64el 5.26.2-6 [3415 kB] Get:13 http://ftpmaster.internal/ubuntu cosmic/main ppc64el perl ppc64el 5.26.2-6 [202 kB] Get:14 http://ftpmaster.internal/ubuntu cosmic/main ppc64el perl-base ppc64el 5.26.2-6 [1305 kB] Get:15 http://ftpmaster.internal/ubuntu cosmic/main ppc64el sed ppc64el 4.5-1 [200 kB] Get:16 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libuuid1 ppc64el 2.32-0.1ubuntu1 [20.9 kB] Get:17 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libblkid1 ppc64el 2.32-0.1ubuntu1 [137 kB] Get:18 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libfdisk1 ppc64el 2.32-0.1ubuntu1 [170 kB] Get:19 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libncursesw6 ppc64el 6.1+20180210-4ubuntu1 [134 kB] Get:20 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libpcre3 ppc64el 2:8.39-10ubuntu2 [238 kB] Get:21 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libselinux1 ppc64el 2.8-1build1 [78.9 kB] Get:22 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libmount1 ppc64el 2.32-0.1ubuntu1 [147 kB] Get:23 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libsmartcols1 ppc64el 2.32-0.1ubuntu1 [91.4 kB] Get:24 http://ftpmaster.internal/ubuntu cosmic/main ppc64el fdisk ppc64el 2.32-0.1ubuntu1 [112 kB] Get:25 http://ftpmaster.internal/ubuntu cosmic/main ppc64el util-linux ppc64el 2.32-0.1ubuntu1 [917 kB] Get:26 http://ftpmaster.internal/ubuntu cosmic/main ppc64el base-passwd ppc64el 3.5.45 [50.2 kB] Get:27 http://ftpmaster.internal/ubuntu cosmic/main ppc64el ncurses-base all 6.1+20180210-4ubuntu1 [18.4 kB] Get:28 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libgomp1 ppc64el 8.1.0-11ubuntu1 [79.8 kB] Get:29 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libitm1 ppc64el 8.1.0-11ubuntu1 [29.3 kB] Get:30 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el gcc-8-base ppc64el 8.1.0-11ubuntu1 [18.8 kB] Get:31 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libgcc1 ppc64el 1:8.1.0-11ubuntu1 [30.2 kB] Get:32 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el liblsan0 ppc64el 8.1.0-11ubuntu1 [144 kB] Get:33 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libtsan0 ppc64el 8.1.0-11ubuntu1 [294 kB] Get:34 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libcc1-0 ppc64el 8.1.0-11ubuntu1 [40.7 kB] Get:35 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libatomic1 ppc64el 8.1.0-11ubuntu1 [9900 B] Get:36 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libstdc++6 ppc64el 8.1.0-11ubuntu1 [444 kB] Get:37 http://ftpmaster.internal/ubuntu cosmic/main ppc64el liblz4-1 ppc64el 1.8.2-1ubuntu1 [66.3 kB] Get:38 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libudev1 ppc64el 238-5ubuntu2 [62.5 kB] Get:39 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libapt-pkg5.0 ppc64el 1.7.0~alpha2 [906 kB] Get:40 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el debconf all 1.5.67 [124 kB] Get:41 http://ftpmaster.internal/ubuntu cosmic/main ppc64el adduser all 3.117ubuntu1 [163 kB] Get:42 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libgpg-error0 ppc64el 1.32-1 [66.3 kB] Get:43 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libgcrypt20 ppc64el 1.8.3-1ubuntu1 [452 kB] Get:44 http://ftpmaster.internal/ubuntu cosmic/main ppc64el gpgv ppc64el 2.2.8-1ubuntu1 [228 kB] Get:45 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libseccomp2 ppc64el 2.3.3-3ubuntu1 [49.5 kB] Get:46 http://ftpmaster.internal/ubuntu cosmic/main ppc64el apt ppc64el 1.7.0~alpha2 [1221 kB] Get:47 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libapparmor1 ppc64el 2.12-4ubuntu6 [32.3 kB] Get:48 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libaudit-common all 1:2.8.3-1ubuntu2 [4064 B] Get:49 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libcap-ng0 ppc64el 0.7.9-1 [11.7 kB] Get:50 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libaudit1 ppc64el 1:2.8.3-1ubuntu2 [41.9 kB] Get:51 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libargon2-1 ppc64el 0~20171227-0.1 [20.6 kB] Get:52 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libcryptsetup12 ppc64el 2:2.0.3-6ubuntu1 [165 kB] Get:53 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libkmod2 ppc64el 25-1ubuntu1 [44.1 kB] Get:54 http://ftpmaster.internal/ubuntu cosmic/main ppc64el mount ppc64el 2.32-0.1ubuntu1 [105 kB] Get:55 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libncurses6 ppc64el 6.1+20180210-4ubuntu1 [109 kB] Get:56 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libprocps7 ppc64el 2:3.3.15-2ubuntu1 [34.6 kB] Get:57 http://ftpmaster.internal/ubuntu cosmic/main ppc64el procps ppc64el 2:3.3.15-2ubuntu1 [245 kB] Get:58 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el systemd ppc64el 238-5ubuntu2 [3174 kB] Get:59 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libsystemd0 ppc64el 238-5ubuntu2 [229 kB] Get:60 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el systemd-sysv ppc64el 238-5ubuntu2 [13.7 kB] Get:61 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libcom-err2 ppc64el 1.44.3-1 [9328 B] Get:62 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libsepol1 ppc64el 2.8-1 [255 kB] Get:63 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libsemanage-common all 2.8-1build1 [7000 B] Get:64 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libsemanage1 ppc64el 2.8-1build1 [86.0 kB] Get:65 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libss2 ppc64el 1.44.3-1 [11.4 kB] Get:66 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libgmp10 ppc64el 2:6.1.2+dfsg-3 [218 kB] Get:67 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libp11-kit0 ppc64el 0.23.12-2 [166 kB] Get:68 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libtasn1-6 ppc64el 4.13-3 [40.0 kB] Get:69 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libncurses5 ppc64el 6.1+20180210-4ubuntu1 [101 kB] Get:70 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libncursesw5 ppc64el 6.1+20180210-4ubuntu1 [120 kB] Get:71 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libtinfo5 ppc64el 6.1+20180210-4ubuntu1 [90.8 kB] Get:72 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libargon2-0 ppc64el 0~20171227-0.1 [4536 B] Get:73 http://ftpmaster.internal/ubuntu cosmic/main ppc64el readline-common all 7.0-5 [52.2 kB] Get:74 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libreadline7 ppc64el 7.0-5 [125 kB] Get:75 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libslang2 ppc64el 2.3.2-1ubuntu1 [385 kB] Get:76 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libsqlite3-0 ppc64el 3.24.0-1 [476 kB] Get:77 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libssl1.1 ppc64el 1.1.0g-2ubuntu5 [914 kB] Get:78 http://ftpmaster.internal/ubuntu cosmic/main ppc64el openssl ppc64el 1.1.0g-2ubuntu5 [531 kB] Get:79 http://ftpmaster.internal/ubuntu cosmic/main ppc64el tzdata all 2018e-1 [188 kB] Get:80 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libpng16-16 ppc64el 1.6.34-2 [201 kB] Get:81 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libbinutils ppc64el 2.31.1-1ubuntu2 [526 kB] Get:82 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el binutils-common ppc64el 2.31.1-1ubuntu2 [194 kB] Get:83 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el binutils ppc64el 2.31.1-1ubuntu2 [3388 B] Get:84 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el binutils-powerpc64le-linux-gnu ppc64el 2.31.1-1ubuntu2 [2062 kB] Get:85 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el cpp-8 ppc64el 8.1.0-11ubuntu1 [6742 kB] Get:86 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el cpp ppc64el 4:8.1.0-2ubuntu0.3 [27.6 kB] Get:87 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libasan5 ppc64el 8.1.0-11ubuntu1 [388 kB] Get:88 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libubsan1 ppc64el 8.1.0-11ubuntu1 [133 kB] Get:89 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libquadmath0 ppc64el 8.1.0-11ubuntu1 [136 kB] Get:90 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libgcc-8-dev ppc64el 8.1.0-11ubuntu1 [1198 kB] Get:91 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el gcc-8 ppc64el 8.1.0-11ubuntu1 [7489 kB] Get:92 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el gcc ppc64el 4:8.1.0-2ubuntu0.3 [5204 B] Get:93 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libstdc++-8-dev ppc64el 8.1.0-11ubuntu1 [1588 kB] Get:94 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el g++-8 ppc64el 8.1.0-11ubuntu1 [7646 kB] Get:95 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el g++ ppc64el 4:8.1.0-2ubuntu0.3 [1580 B] Get:96 http://ftpmaster.internal/ubuntu cosmic/main ppc64el make ppc64el 4.2.1-1.1 [168 kB] Get:97 http://ftpmaster.internal/ubuntu cosmic/main ppc64el dpkg-dev all 1.19.0.5ubuntu3 [608 kB] Get:98 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libdpkg-perl all 1.19.0.5ubuntu3 [211 kB] Get:99 http://ftpmaster.internal/ubuntu cosmic/main ppc64el build-essential ppc64el 12.5ubuntu2 [4740 B] Get:100 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libasan4 ppc64el 7.3.0-26ubuntu1 [366 kB] Get:101 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libubsan0 ppc64el 7.3.0-26ubuntu1 [136 kB] Get:102 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el g++-7 ppc64el 7.3.0-26ubuntu1 [7130 kB] Get:103 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el gcc-7 ppc64el 7.3.0-26ubuntu1 [6935 kB] Get:104 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libstdc++-7-dev ppc64el 7.3.0-26ubuntu1 [1531 kB] Get:105 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libgcc-7-dev ppc64el 7.3.0-26ubuntu1 [985 kB] Get:106 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el cpp-7 ppc64el 7.3.0-26ubuntu1 [6276 kB] Get:107 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el gcc-7-base ppc64el 7.3.0-26ubuntu1 [18.9 kB] Get:108 http://ftpmaster.internal/ubuntu cosmic/main ppc64el e2fslibs ppc64el 1.44.3-1 [2704 B] Get:109 http://ftpmaster.internal/ubuntu cosmic/main ppc64el pinentry-curses ppc64el 1.1.0-1build2 [38.7 kB] Get:110 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libnpth0 ppc64el 1.6-1 [8652 B] Get:111 http://ftpmaster.internal/ubuntu cosmic/main ppc64el gpg ppc64el 2.2.8-1ubuntu1 [531 kB] Get:112 http://ftpmaster.internal/ubuntu cosmic/main ppc64el gpgconf ppc64el 2.2.8-1ubuntu1 [143 kB] Get:113 http://ftpmaster.internal/ubuntu cosmic/main ppc64el gpg-agent ppc64el 2.2.8-1ubuntu1 [261 kB] Get:114 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libcomerr2 ppc64el 1.44.3-1 [2704 B] Get:115 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libusb-0.1-4 ppc64el 2:0.1.12-32 [17.0 kB] Get:116 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el linux-libc-dev ppc64el 4.17.0-5.6 [997 kB] Get:117 http://ftpmaster.internal/ubuntu cosmic/main ppc64el pkgbinarymangler all 141 [53.4 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 80.4 MB in 19s (4135 kB/s) (Reading database ... 12528 files and directories currently installed.) Preparing to unpack .../base-files_10.1ubuntu4_ppc64el.deb ... Unpacking base-files (10.1ubuntu4) over (10.1ubuntu2) ... Setting up base-files (10.1ubuntu4) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Selecting previously unselected package libtinfo6:ppc64el. (Reading database ... 12528 files and directories currently installed.) Preparing to unpack .../libtinfo6_6.1+20180210-4ubuntu1_ppc64el.deb ... Unpacking libtinfo6:ppc64el (6.1+20180210-4ubuntu1) ... Setting up libtinfo6:ppc64el (6.1+20180210-4ubuntu1) ... (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../debianutils_4.8.6_ppc64el.deb ... Unpacking debianutils (4.8.6) over (4.8.4) ... Setting up debianutils (4.8.6) ... (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../bash_4.4.18-2ubuntu2_ppc64el.deb ... Unpacking bash (4.4.18-2ubuntu2) over (4.4.18-2ubuntu1) ... Setting up bash (4.4.18-2ubuntu2) ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.32-0.1ubuntu1_ppc64el.deb ... Unpacking bsdutils (1:2.32-0.1ubuntu1) over (1:2.31.1-0.4ubuntu3) ... Setting up bsdutils (1:2.32-0.1ubuntu1) ... (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../tar_1.30+dfsg-2_ppc64el.deb ... Unpacking tar (1.30+dfsg-2) over (1.29b-2) ... Setting up tar (1.30+dfsg-2) ... (Reading database ... 12537 files and directories currently installed.) Preparing to unpack .../dpkg_1.19.0.5ubuntu3_ppc64el.deb ... Unpacking dpkg (1.19.0.5ubuntu3) over (1.19.0.5ubuntu2) ... Setting up dpkg (1.19.0.5ubuntu3) ... 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Setting up make (4.2.1-1.1) ... Setting up pkgbinarymangler (141) ... Setting up e2fslibs:ppc64el (1.44.3-1) ... Setting up libpng16-16:ppc64el (1.6.34-2) ... Setting up libncursesw5:ppc64el (6.1+20180210-4ubuntu1) ... Setting up libreadline7:ppc64el (7.0-5) ... Setting up tzdata (2018e-1) ... Current default time zone: 'Etc/UTC' Local time is now: Wed Jul 18 23:11:43 UTC 2018. Universal Time is now: Wed Jul 18 23:11:43 UTC 2018. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up systemd-sysv (238-5ubuntu2) ... Setting up libtsan0:ppc64el (8.1.0-11ubuntu1) ... Setting up gpgconf (2.2.8-1ubuntu1) ... Setting up linux-libc-dev:ppc64el (4.17.0-5.6) ... Setting up perl-modules-5.26 (5.26.2-6) ... Setting up liblsan0:ppc64el (8.1.0-11ubuntu1) ... Setting up libargon2-0 (0~20171227-0.1) ... Setting up gcc-7-base:ppc64el (7.3.0-26ubuntu1) ... Setting up binutils-common:ppc64el (2.31.1-1ubuntu2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... Setting up libperl5.26:ppc64el (5.26.2-6) ... Setting up libssl1.1:ppc64el (1.1.0g-2ubuntu5) ... Setting up openssl (1.1.0g-2ubuntu5) ... Setting up libsqlite3-0:ppc64el (3.24.0-1) ... Setting up pinentry-curses (1.1.0-1build2) ... Setting up libcomerr2:ppc64el (1.44.3-1) ... Setting up libslang2:ppc64el (2.3.2-1ubuntu1) ... Setting up libasan5:ppc64el (8.1.0-11ubuntu1) ... Setting up libusb-0.1-4:ppc64el (2:0.1.12-32) ... Setting up libitm1:ppc64el (8.1.0-11ubuntu1) ... Setting up gpg (2.2.8-1ubuntu1) ... Setting up libubsan1:ppc64el (8.1.0-11ubuntu1) ... Setting up libasan4:ppc64el (7.3.0-26ubuntu1) ... Setting up libbinutils:ppc64el (2.31.1-1ubuntu2) ... Setting up libubsan0:ppc64el (7.3.0-26ubuntu1) ... Setting up binutils-powerpc64le-linux-gnu (2.31.1-1ubuntu2) ... Setting up gpg-agent (2.2.8-1ubuntu1) ... Setting up libgcc-7-dev:ppc64el (7.3.0-26ubuntu1) ... Setting up cpp-7 (7.3.0-26ubuntu1) ... Setting up libstdc++-7-dev:ppc64el (7.3.0-26ubuntu1) ... Setting up perl (5.26.2-6) ... Setting up libgcc-8-dev:ppc64el (8.1.0-11ubuntu1) ... Setting up binutils (2.31.1-1ubuntu2) ... Setting up libstdc++-8-dev:ppc64el (8.1.0-11ubuntu1) ... Setting up gcc-7 (7.3.0-26ubuntu1) ... Setting up g++-7 (7.3.0-26ubuntu1) ... Setting up libdpkg-perl (1.19.0.5ubuntu3) ... Setting up gcc-8 (8.1.0-11ubuntu1) ... Setting up g++-8 (8.1.0-11ubuntu1) ... Setting up dpkg-dev (1.19.0.5ubuntu3) ... Setting up gcc (4:8.1.0-2ubuntu0.3) ... Setting up g++ (4:8.1.0-2ubuntu0.3) ... Setting up build-essential (12.5ubuntu2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... RUN: /usr/share/launchpad-buildd/slavebin/sbuild-package PACKAGEBUILD-15144865 ppc64el cosmic-proposed -c chroot:build-PACKAGEBUILD-15144865 --arch=ppc64el --dist=cosmic-proposed --nolog clustalo_1.2.4-2.dsc Initiating build PACKAGEBUILD-15144865 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 4.4.0-128-generic #154-Ubuntu SMP Fri May 25 14:13:59 UTC 2018 ppc64le sbuild (Debian sbuild) 0.67.0 (26 Dec 2015) on bos02-ppc64el-008.buildd +==============================================================================+ | clustalo 1.2.4-2 (ppc64el) 18 Jul 2018 23:11 | +==============================================================================+ Package: clustalo Version: 1.2.4-2 Source Version: 1.2.4-2 Distribution: cosmic-proposed Machine Architecture: ppc64el Host Architecture: ppc64el Build Architecture: ppc64el I: NOTICE: Log filtering will replace 'build/clustalo-OVvhu6/clustalo-1.2.4' with '<>' I: NOTICE: Log filtering will replace 'build/clustalo-OVvhu6' with '<>' I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-15144865/chroot-autobuild' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- clustalo_1.2.4-2.dsc exists in .; copying to chroot Check architectures ------------------- Check dependencies ------------------ Merged Build-Depends: build-essential, fakeroot Filtered Build-Depends: build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-core-dummy' in '/<>/resolver-0TjGLP/apt_archive/sbuild-build-depends-core-dummy.deb'. Ign:1 copy:/<>/resolver-0TjGLP/apt_archive ./ InRelease Get:2 copy:/<>/resolver-0TjGLP/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-0TjGLP/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-0TjGLP/apt_archive ./ Sources [214 B] Get:5 copy:/<>/resolver-0TjGLP/apt_archive ./ Packages [530 B] Fetched 2863 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install core build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-7 libargon2-0 libncursesw5 libprocps6 libstdc++-7-dev Use 'apt autoremove' to remove them. The following NEW packages will be installed: sbuild-build-depends-core-dummy 0 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 856 B of archives. After this operation, 0 B of additional disk space will be used. Get:1 copy:/<>/resolver-0TjGLP/apt_archive ./ sbuild-build-depends-core-dummy 0.invalid.0 [856 B] debconf: delaying package configuration, since apt-utils is not installed Fetched 856 B in 213503982334601d 7h 0min 15s (0 B/s) Selecting previously unselected package sbuild-build-depends-core-dummy. (Reading database ... 13558 files and directories currently installed.) Preparing to unpack .../sbuild-build-depends-core-dummy_0.invalid.0_ppc64el.deb ... Unpacking sbuild-build-depends-core-dummy (0.invalid.0) ... Setting up sbuild-build-depends-core-dummy (0.invalid.0) ... Merged Build-Depends: debhelper (>= 11~), dh-linktree, libargtable2-dev, doxygen, graphviz, sphinx-common Filtered Build-Depends: debhelper (>= 11~), dh-linktree, libargtable2-dev, doxygen, graphviz, sphinx-common dpkg-deb: building package 'sbuild-build-depends-clustalo-dummy' in '/<>/resolver-3ji_ff/apt_archive/sbuild-build-depends-clustalo-dummy.deb'. Ign:1 copy:/<>/resolver-3ji_ff/apt_archive ./ InRelease Get:2 copy:/<>/resolver-3ji_ff/apt_archive ./ Release [2119 B] Ign:3 copy:/<>/resolver-3ji_ff/apt_archive ./ Release.gpg Get:4 copy:/<>/resolver-3ji_ff/apt_archive ./ Sources [256 B] Get:5 copy:/<>/resolver-3ji_ff/apt_archive ./ Packages [578 B] Fetched 2953 B in 0s (0 B/s) Reading package lists... Reading package lists... +------------------------------------------------------------------------------+ | Install clustalo build dependencies (apt-based resolver) | +------------------------------------------------------------------------------+ Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following packages were automatically installed and are no longer required: g++-7 libargon2-0 libncursesw5 libprocps6 libstdc++-7-dev Use 'apt autoremove' to remove them. The following additional packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-linktree dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base intltool-debian libarchive-zip-perl libargtable2-0 libargtable2-dev libargtable2-docs libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-6.0 libcroco3 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu60 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblab-gamut1 libllvm6.0 libltdl7 libmagic-mgc libmagic1 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libsigsegv2 libsm6 libthai-data libthai0 libtiff5 libtimedate-perl libtool libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf sphinx-common ucf x11-common Suggested packages: autoconf-archive gnu-standards autoconf-doc wamerican | wordlist whois vacation dh-make doxygen-latex doxygen-doc doxygen-gui gettext-doc libasprintf-dev libgettextpo-dev gsfonts graphviz-doc groff libgd-tools libtool-doc gfortran | fortran95-compiler gcj-jdk xapian-tools m4-doc apparmor less www-browser libmail-box-perl Recommended packages: curl | wget | lynx fonts-liberation libarchive-cpio-perl libglib2.0-data shared-mime-info xdg-user-dirs libgts-bin javascript-common libltdl-dev libmail-sendmail-perl python-sphinx | python3-sphinx The following NEW packages will be installed: autoconf automake autopoint autotools-dev bsdmainutils debhelper dh-autoreconf dh-linktree dh-strip-nondeterminism doxygen dwz file fontconfig fontconfig-config fonts-dejavu-core gettext gettext-base graphviz groff-base intltool-debian libarchive-zip-perl libargtable2-0 libargtable2-dev libargtable2-docs libbsd0 libcairo2 libcdt5 libcgraph6 libclang1-6.0 libcroco3 libdatrie1 libedit2 libelf1 libexpat1 libfile-stripnondeterminism-perl libfontconfig1 libfreetype6 libfribidi0 libgd3 libglib2.0-0 libgraphite2-3 libgts-0.7-5 libgvc6 libgvpr2 libharfbuzz0b libice6 libicu60 libjbig0 libjpeg-turbo8 libjpeg8 libjs-jquery libjs-sphinxdoc libjs-underscore liblab-gamut1 libllvm6.0 libltdl7 libmagic-mgc libmagic1 libpango-1.0-0 libpangocairo-1.0-0 libpangoft2-1.0-0 libpathplan4 libpipeline1 libpixman-1-0 libsigsegv2 libsm6 libthai-data libthai0 libtiff5 libtimedate-perl libtool libwebp6 libx11-6 libx11-data libxapian30 libxau6 libxaw7 libxcb-render0 libxcb-shm0 libxcb1 libxdmcp6 libxext6 libxml2 libxmu6 libxpm4 libxrender1 libxt6 m4 man-db po-debconf sbuild-build-depends-clustalo-dummy sphinx-common ucf x11-common 0 upgraded, 94 newly installed, 0 to remove and 0 not upgraded. Need to get 54.0 MB of archives. After this operation, 233 MB of additional disk space will be used. Get:1 copy:/<>/resolver-3ji_ff/apt_archive ./ sbuild-build-depends-clustalo-dummy 0.invalid.0 [904 B] Get:2 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxau6 ppc64el 1:1.0.8-1 [7460 B] Get:3 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libbsd0 ppc64el 0.9.1-1 [53.6 kB] Get:4 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxdmcp6 ppc64el 1:1.1.2-3 [11.0 kB] Get:5 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libxcb1 ppc64el 1.13-2 [51.9 kB] Get:6 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libx11-data all 2:1.6.5-1 [113 kB] Get:7 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libx11-6 ppc64el 2:1.6.5-1 [600 kB] Get:8 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxext6 ppc64el 2:1.3.3-1 [30.7 kB] Get:9 http://ftpmaster.internal/ubuntu cosmic/main ppc64el bsdmainutils ppc64el 11.1.2ubuntu2 [185 kB] Get:10 http://ftpmaster.internal/ubuntu cosmic/main ppc64el groff-base ppc64el 1.22.3-10 [1468 kB] Get:11 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libpipeline1 ppc64el 1.5.0-1 [24.7 kB] Get:12 http://ftpmaster.internal/ubuntu cosmic/main ppc64el man-db ppc64el 2.8.3-2 [1034 kB] Get:13 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libexpat1 ppc64el 2.2.5-3 [89.5 kB] Get:14 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libfreetype6 ppc64el 2.8.1-2ubuntu2 [386 kB] Get:15 http://ftpmaster.internal/ubuntu cosmic/main ppc64el ucf all 3.0038 [50.5 kB] Get:16 http://ftpmaster.internal/ubuntu cosmic/main ppc64el fonts-dejavu-core all 2.37-1 [1041 kB] Get:17 http://ftpmaster.internal/ubuntu cosmic/main ppc64el fontconfig-config all 2.12.6-0ubuntu2 [55.8 kB] Get:18 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libfontconfig1 ppc64el 2.12.6-0ubuntu2 [167 kB] Get:19 http://ftpmaster.internal/ubuntu cosmic/main ppc64el fontconfig ppc64el 2.12.6-0ubuntu2 [169 kB] Get:20 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libjpeg-turbo8 ppc64el 1.5.2-0ubuntu6 [147 kB] Get:21 http://ftpmaster.internal/ubuntu cosmic/main ppc64el x11-common all 1:7.7+19ubuntu8 [22.5 kB] Get:22 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libice6 ppc64el 2:1.0.9-2 [38.0 kB] Get:23 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libsm6 ppc64el 2:1.2.2-1 [15.1 kB] Get:24 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libmagic-mgc ppc64el 1:5.33-3 [192 kB] Get:25 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libmagic1 ppc64el 1:5.33-3 [78.0 kB] Get:26 http://ftpmaster.internal/ubuntu cosmic/main ppc64el file ppc64el 1:5.33-3 [23.4 kB] Get:27 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libelf1 ppc64el 0.170-0.5 [46.5 kB] Get:28 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libfribidi0 ppc64el 1.0.4-1 [26.0 kB] Get:29 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libglib2.0-0 ppc64el 2.56.1-2ubuntu1 [1160 kB] Get:30 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libicu60 ppc64el 60.2-6ubuntu1 [8350 kB] Get:31 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libxml2 ppc64el 2.9.4+dfsg1-7build1 [616 kB] Get:32 http://ftpmaster.internal/ubuntu cosmic/main ppc64el gettext-base ppc64el 0.19.8.1-6build1 [50.1 kB] Get:33 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libedit2 ppc64el 3.1-20180525-1 [89.9 kB] Get:34 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libsigsegv2 ppc64el 2.12-2 [13.9 kB] Get:35 http://ftpmaster.internal/ubuntu cosmic/main ppc64el m4 ppc64el 1.4.18-1 [202 kB] Get:36 http://ftpmaster.internal/ubuntu cosmic/main ppc64el autoconf all 2.69-11 [322 kB] Get:37 http://ftpmaster.internal/ubuntu cosmic/main ppc64el autotools-dev all 20180224.1 [39.6 kB] Get:38 http://ftpmaster.internal/ubuntu cosmic/main ppc64el automake all 1:1.15.1-3ubuntu2 [509 kB] Get:39 http://ftpmaster.internal/ubuntu cosmic/main ppc64el autopoint all 0.19.8.1-6build1 [412 kB] Get:40 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libtool all 2.4.6-2.1build1 [196 kB] Get:41 http://ftpmaster.internal/ubuntu cosmic/main ppc64el dh-autoreconf all 19 [16.1 kB] Get:42 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libarchive-zip-perl all 1.60-1ubuntu1 [84.6 kB] Get:43 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libfile-stripnondeterminism-perl all 0.042-1 [15.2 kB] Get:44 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libtimedate-perl all 2.3000-2 [37.5 kB] Get:45 http://ftpmaster.internal/ubuntu cosmic/main ppc64el dh-strip-nondeterminism all 0.042-1 [5188 B] Get:46 http://ftpmaster.internal/ubuntu cosmic/main ppc64el dwz ppc64el 0.12-2 [83.3 kB] Get:47 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libcroco3 ppc64el 0.6.12-2 [82.5 kB] Get:48 http://ftpmaster.internal/ubuntu cosmic/main ppc64el gettext ppc64el 0.19.8.1-6build1 [953 kB] Get:49 http://ftpmaster.internal/ubuntu cosmic/main ppc64el intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:50 http://ftpmaster.internal/ubuntu cosmic/main ppc64el po-debconf all 1.0.20 [232 kB] Get:51 http://ftpmaster.internal/ubuntu cosmic/main ppc64el debhelper all 11.3.2ubuntu1 [883 kB] Get:52 http://ftpmaster.internal/ubuntu cosmic/universe ppc64el dh-linktree all 0.6 [10.7 kB] Get:53 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libllvm6.0 ppc64el 1:6.0.1-2ubuntu1 [13.8 MB] Get:54 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libclang1-6.0 ppc64el 1:6.0.1-2ubuntu1 [6853 kB] Get:55 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxapian30 ppc64el 1.4.6-2 [812 kB] Get:56 http://ftpmaster.internal/ubuntu cosmic/main ppc64el doxygen ppc64el 1.8.13-10 [4006 kB] Get:57 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el libcdt5 ppc64el 2.40.1-3 [22.2 kB] Get:58 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el libcgraph6 ppc64el 2.40.1-3 [43.6 kB] Get:59 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libjpeg8 ppc64el 8c-2ubuntu8 [2146 B] Get:60 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libjbig0 ppc64el 2.1-3.1build1 [26.9 kB] Get:61 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libtiff5 ppc64el 4.0.9-6 [165 kB] Get:62 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libwebp6 ppc64el 0.6.1-2 [225 kB] Get:63 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxpm4 ppc64el 1:3.5.12-1 [35.9 kB] Get:64 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libgd3 ppc64el 2.2.5-4 [134 kB] Get:65 http://ftpmaster.internal/ubuntu cosmic/universe ppc64el libgts-0.7-5 ppc64el 0.7.6+darcs121130-4 [140 kB] Get:66 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libpixman-1-0 ppc64el 0.34.0-2 [268 kB] Get:67 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libxcb-render0 ppc64el 1.13-2 [15.9 kB] Get:68 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libxcb-shm0 ppc64el 1.13-2 [5888 B] Get:69 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxrender1 ppc64el 1:0.9.10-1 [17.6 kB] Get:70 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libcairo2 ppc64el 1.15.10-3 [680 kB] Get:71 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libltdl7 ppc64el 2.4.6-2.1build1 [45.3 kB] Get:72 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libthai-data all 0.1.27-2 [133 kB] Get:73 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libdatrie1 ppc64el 0.2.12-1 [18.3 kB] Get:74 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libthai0 ppc64el 0.1.27-2 [18.0 kB] Get:75 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libpango-1.0-0 ppc64el 1.42.1-2 [160 kB] Get:76 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libgraphite2-3 ppc64el 1.3.11-2 [67.8 kB] Get:77 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libharfbuzz0b ppc64el 1.8.3-1 [263 kB] Get:78 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libpangoft2-1.0-0 ppc64el 1.42.1-2 [35.1 kB] Get:79 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libpangocairo-1.0-0 ppc64el 1.42.1-2 [22.5 kB] Get:80 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el libpathplan4 ppc64el 2.40.1-3 [26.3 kB] Get:81 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el libgvc6 ppc64el 2.40.1-3 [679 kB] Get:82 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el libgvpr2 ppc64el 2.40.1-3 [172 kB] Get:83 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el liblab-gamut1 ppc64el 2.40.1-3 [178 kB] Get:84 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxt6 ppc64el 1:1.1.5-1 [152 kB] Get:85 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxmu6 ppc64el 2:1.1.2-2 [43.4 kB] Get:86 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libxaw7 ppc64el 2:1.0.13-1 [176 kB] Get:87 http://ftpmaster.internal/ubuntu cosmic-proposed/universe ppc64el graphviz ppc64el 2.40.1-3 [603 kB] Get:88 http://ftpmaster.internal/ubuntu cosmic/universe ppc64el libargtable2-0 ppc64el 13-1 [14.6 kB] Get:89 http://ftpmaster.internal/ubuntu cosmic/universe ppc64el libargtable2-docs all 13-1 [2618 kB] Get:90 http://ftpmaster.internal/ubuntu cosmic/universe ppc64el libargtable2-dev ppc64el 13-1 [54.1 kB] Get:91 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libjs-jquery all 3.2.1-1 [152 kB] Get:92 http://ftpmaster.internal/ubuntu cosmic/main ppc64el libjs-underscore all 1.8.3~dfsg-1 [59.9 kB] Get:93 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el libjs-sphinxdoc all 1.7.6-1 [91.7 kB] Get:94 http://ftpmaster.internal/ubuntu cosmic-proposed/main ppc64el sphinx-common all 1.7.6-1 [437 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 54.0 MB in 5s (10.6 MB/s) Selecting previously unselected package libxau6:ppc64el. (Reading database ... 13558 files and directories currently installed.) Preparing to unpack .../00-libxau6_1%3a1.0.8-1_ppc64el.deb ... Unpacking libxau6:ppc64el (1:1.0.8-1) ... Selecting previously unselected package libbsd0:ppc64el. Preparing to unpack .../01-libbsd0_0.9.1-1_ppc64el.deb ... Unpacking libbsd0:ppc64el (0.9.1-1) ... Selecting previously unselected package libxdmcp6:ppc64el. Preparing to unpack .../02-libxdmcp6_1%3a1.1.2-3_ppc64el.deb ... Unpacking libxdmcp6:ppc64el (1:1.1.2-3) ... Selecting previously unselected package libxcb1:ppc64el. Preparing to unpack .../03-libxcb1_1.13-2_ppc64el.deb ... Unpacking libxcb1:ppc64el (1.13-2) ... Selecting previously unselected package libx11-data. Preparing to unpack .../04-libx11-data_2%3a1.6.5-1_all.deb ... Unpacking libx11-data (2:1.6.5-1) ... Selecting previously unselected package libx11-6:ppc64el. Preparing to unpack .../05-libx11-6_2%3a1.6.5-1_ppc64el.deb ... Unpacking libx11-6:ppc64el (2:1.6.5-1) ... 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Unpacking libxt6:ppc64el (1:1.1.5-1) ... Selecting previously unselected package libxmu6:ppc64el. Preparing to unpack .../83-libxmu6_2%3a1.1.2-2_ppc64el.deb ... Unpacking libxmu6:ppc64el (2:1.1.2-2) ... Selecting previously unselected package libxaw7:ppc64el. Preparing to unpack .../84-libxaw7_2%3a1.0.13-1_ppc64el.deb ... Unpacking libxaw7:ppc64el (2:1.0.13-1) ... Selecting previously unselected package graphviz. Preparing to unpack .../85-graphviz_2.40.1-3_ppc64el.deb ... Unpacking graphviz (2.40.1-3) ... Selecting previously unselected package libargtable2-0. Preparing to unpack .../86-libargtable2-0_13-1_ppc64el.deb ... Unpacking libargtable2-0 (13-1) ... Selecting previously unselected package libargtable2-docs. Preparing to unpack .../87-libargtable2-docs_13-1_all.deb ... Unpacking libargtable2-docs (13-1) ... Selecting previously unselected package libargtable2-dev. Preparing to unpack .../88-libargtable2-dev_13-1_ppc64el.deb ... Unpacking libargtable2-dev (13-1) ... 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Setting up libjs-jquery (3.2.1-1) ... Setting up libxapian30:ppc64el (1.4.6-2) ... Setting up libpathplan4 (2.40.1-3) ... Setting up libexpat1:ppc64el (2.2.5-3) ... Setting up libicu60:ppc64el (60.2-6ubuntu1) ... Setting up liblab-gamut1 (2.40.1-3) ... Setting up libarchive-zip-perl (1.60-1ubuntu1) ... Setting up libjs-underscore (1.8.3~dfsg-1) ... Setting up libllvm6.0:ppc64el (1:6.0.1-2ubuntu1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up libjbig0:ppc64el (2.1-3.1build1) ... Setting up libsigsegv2:ppc64el (2.12-2) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libelf1:ppc64el (0.170-0.5) ... Setting up groff-base (1.22.3-10) ... Setting up libglib2.0-0:ppc64el (2.56.1-2ubuntu1) ... No schema files found: doing nothing. Setting up libclang1-6.0:ppc64el (1:6.0.1-2ubuntu1) ... Setting up libjs-sphinxdoc (1.7.6-1) ... Setting up libdatrie1:ppc64el (0.2.12-1) ... Setting up gettext-base (0.19.8.1-6build1) ... Setting up libjpeg-turbo8:ppc64el (1.5.2-0ubuntu6) ... Setting up libpipeline1:ppc64el (1.5.0-1) ... Setting up m4 (1.4.18-1) ... Setting up libbsd0:ppc64el (0.9.1-1) ... Setting up ucf (3.0038) ... Setting up libxml2:ppc64el (2.9.4+dfsg1-7build1) ... Setting up libfreetype6:ppc64el (2.8.1-2ubuntu2) ... Setting up libmagic-mgc (1:5.33-3) ... Setting up libmagic1:ppc64el (1:5.33-3) ... Setting up libgraphite2-3:ppc64el (1.3.11-2) ... Setting up libcroco3:ppc64el (0.6.12-2) ... Setting up libpixman-1-0:ppc64el (0.34.0-2) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... Setting up dwz (0.12-2) ... Setting up autotools-dev (20180224.1) ... Processing triggers for systemd (238-5ubuntu2) ... Setting up libltdl7:ppc64el (2.4.6-2.1build1) ... Setting up sphinx-common (1.7.6-1) ... Setting up libfribidi0:ppc64el (1.0.4-1) ... Setting up libargtable2-dev (13-1) ... Setting up libthai-data (0.1.27-2) ... Setting up libxdmcp6:ppc64el (1:1.1.2-3) ... Setting up bsdmainutils (11.1.2ubuntu2) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up x11-common (1:7.7+19ubuntu8) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Running in chroot, ignoring request. invoke-rc.d: policy-rc.d denied execution of start. Setting up libcdt5 (2.40.1-3) ... Setting up libx11-data (2:1.6.5-1) ... Setting up libxau6:ppc64el (1:1.0.8-1) ... Setting up autopoint (0.19.8.1-6build1) ... Setting up libcgraph6 (2.40.1-3) ... Setting up libwebp6:ppc64el (0.6.1-2) ... Setting up libfile-stripnondeterminism-perl (0.042-1) ... Setting up libjpeg8:ppc64el (8c-2ubuntu8) ... Setting up libgts-0.7-5:ppc64el (0.7.6+darcs121130-4) ... Setting up fontconfig-config (2.12.6-0ubuntu2) ... Setting up gettext (0.19.8.1-6build1) ... Setting up libgvpr2 (2.40.1-3) ... Setting up doxygen (1.8.13-10) ... Setting up libharfbuzz0b:ppc64el (1.8.3-1) ... Setting up libtiff5:ppc64el (4.0.9-6) ... Setting up autoconf (2.69-11) ... Setting up libthai0:ppc64el (0.1.27-2) ... Setting up file (1:5.33-3) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up automake (1:1.15.1-3ubuntu2) ... update-alternatives: using /usr/bin/automake-1.15 to provide /usr/bin/automake (automake) in auto mode Setting up libice6:ppc64el (2:1.0.9-2) ... Setting up man-db (2.8.3-2) ... Not building database; man-db/auto-update is not 'true'. Setting up libxcb1:ppc64el (1.13-2) ... Setting up libtool (2.4.6-2.1build1) ... Setting up libfontconfig1:ppc64el (2.12.6-0ubuntu2) ... Setting up libsm6:ppc64el (2:1.2.2-1) ... Setting up libxcb-render0:ppc64el (1.13-2) ... Setting up po-debconf (1.0.20) ... Setting up libx11-6:ppc64el (2:1.6.5-1) ... Setting up libxcb-shm0:ppc64el (1.13-2) ... Setting up libxpm4:ppc64el (1:3.5.12-1) ... Setting up libxt6:ppc64el (1:1.1.5-1) ... Setting up libxrender1:ppc64el (1:0.9.10-1) ... Setting up fontconfig (2.12.6-0ubuntu2) ... Regenerating fonts cache... done. Setting up libxext6:ppc64el (2:1.3.3-1) ... Setting up libgd3:ppc64el (2.2.5-4) ... Setting up libxmu6:ppc64el (2:1.1.2-2) ... Setting up libpango-1.0-0:ppc64el (1.42.1-2) ... Setting up libxaw7:ppc64el (2:1.0.13-1) ... Setting up libcairo2:ppc64el (1.15.10-3) ... Setting up libpangoft2-1.0-0:ppc64el (1.42.1-2) ... Setting up libpangocairo-1.0-0:ppc64el (1.42.1-2) ... Setting up libgvc6 (2.40.1-3) ... Setting up graphviz (2.40.1-3) ... Setting up dh-autoreconf (19) ... Setting up debhelper (11.3.2ubuntu1) ... Setting up dh-linktree (0.6) ... Setting up dh-strip-nondeterminism (0.042-1) ... Setting up sbuild-build-depends-clustalo-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.27-3ubuntu1) ... Processing triggers for systemd (238-5ubuntu2) ... +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 4.4.0-128-generic ppc64el (ppc64le) Toolchain package versions: binutils_2.31.1-1ubuntu2 dpkg-dev_1.19.0.5ubuntu3 g++-7_7.3.0-26ubuntu1 g++-8_8.1.0-11ubuntu1 gcc-7_7.3.0-26ubuntu1 gcc-8_8.1.0-11ubuntu1 libc6-dev_2.27-3ubuntu1 libstdc++-7-dev_7.3.0-26ubuntu1 libstdc++-8-dev_8.1.0-11ubuntu1 libstdc++6_8.1.0-11ubuntu1 linux-libc-dev_4.17.0-5.6 Package versions: adduser_3.117ubuntu1 advancecomp_2.1-1 apt_1.7.0~alpha2 autoconf_2.69-11 automake_1:1.15.1-3ubuntu2 autopoint_0.19.8.1-6build1 autotools-dev_20180224.1 base-files_10.1ubuntu4 base-passwd_3.5.45 bash_4.4.18-2ubuntu2 binutils_2.31.1-1ubuntu2 binutils-common_2.31.1-1ubuntu2 binutils-powerpc64le-linux-gnu_2.31.1-1ubuntu2 bsdmainutils_11.1.2ubuntu2 bsdutils_1:2.32-0.1ubuntu1 build-essential_12.5ubuntu2 bzip2_1.0.6-8.1 ca-certificates_20180409 coreutils_8.28-1ubuntu1 cpp_4:8.1.0-2ubuntu0.3 cpp-7_7.3.0-26ubuntu1 cpp-8_8.1.0-11ubuntu1 dash_0.5.8-2.10 debconf_1.5.67 debhelper_11.3.2ubuntu1 debianutils_4.8.6 dh-autoreconf_19 dh-linktree_0.6 dh-strip-nondeterminism_0.042-1 diffutils_1:3.6-1 dmsetup_2:1.02.145-4.1ubuntu3 doxygen_1.8.13-10 dpkg_1.19.0.5ubuntu3 dpkg-dev_1.19.0.5ubuntu3 dwz_0.12-2 e2fslibs_1.44.3-1 e2fsprogs_1.44.3-1 fakeroot_1.22-2ubuntu1 fdisk_2.32-0.1ubuntu1 file_1:5.33-3 findutils_4.6.0+git+20170828-2 fontconfig_2.12.6-0ubuntu2 fontconfig-config_2.12.6-0ubuntu2 fonts-dejavu-core_2.37-1 g++_4:8.1.0-2ubuntu0.3 g++-7_7.3.0-26ubuntu1 g++-8_8.1.0-11ubuntu1 gcc_4:8.1.0-2ubuntu0.3 gcc-7_7.3.0-26ubuntu1 gcc-7-base_7.3.0-26ubuntu1 gcc-8_8.1.0-11ubuntu1 gcc-8-base_8.1.0-11ubuntu1 gettext_0.19.8.1-6build1 gettext-base_0.19.8.1-6build1 gpg_2.2.8-1ubuntu1 gpg-agent_2.2.8-1ubuntu1 gpgconf_2.2.8-1ubuntu1 gpgv_2.2.8-1ubuntu1 graphviz_2.40.1-3 grep_3.1-2 groff-base_1.22.3-10 gzip_1.6-5ubuntu1 hostname_3.20 init_1.51 init-system-helpers_1.51 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3build1 libapparmor1_2.12-4ubuntu6 libapt-pkg5.0_1.7.0~alpha2 libarchive-zip-perl_1.60-1ubuntu1 libargon2-0_0~20171227-0.1 libargon2-1_0~20171227-0.1 libargtable2-0_13-1 libargtable2-dev_13-1 libargtable2-docs_13-1 libasan4_7.3.0-26ubuntu1 libasan5_8.1.0-11ubuntu1 libassuan0_2.5.1-2 libatomic1_8.1.0-11ubuntu1 libattr1_1:2.4.47-2build1 libaudit-common_1:2.8.3-1ubuntu2 libaudit1_1:2.8.3-1ubuntu2 libbinutils_2.31.1-1ubuntu2 libblkid1_2.32-0.1ubuntu1 libbsd0_0.9.1-1 libbz2-1.0_1.0.6-8.1 libc-bin_2.27-3ubuntu1 libc-dev-bin_2.27-3ubuntu1 libc6_2.27-3ubuntu1 libc6-dev_2.27-3ubuntu1 libcairo2_1.15.10-3 libcap-ng0_0.7.9-1 libcap2_1:2.25-1.2 libcc1-0_8.1.0-11ubuntu1 libcdt5_2.40.1-3 libcgraph6_2.40.1-3 libclang1-6.0_1:6.0.1-2ubuntu1 libcom-err2_1.44.3-1 libcomerr2_1.44.3-1 libcroco3_0.6.12-2 libcryptsetup12_2:2.0.3-6ubuntu1 libdatrie1_0.2.12-1 libdb5.3_5.3.28-13.1ubuntu1 libdebconfclient0_0.213ubuntu1 libdevmapper1.02.1_2:1.02.145-4.1ubuntu3 libdpkg-perl_1.19.0.5ubuntu3 libedit2_3.1-20180525-1 libelf1_0.170-0.5 libexpat1_2.2.5-3 libext2fs2_1.44.3-1 libfakeroot_1.22-2ubuntu1 libfdisk1_2.32-0.1ubuntu1 libffi6_3.2.1-8 libfile-stripnondeterminism-perl_0.042-1 libfontconfig1_2.12.6-0ubuntu2 libfreetype6_2.8.1-2ubuntu2 libfribidi0_1.0.4-1 libgcc-7-dev_7.3.0-26ubuntu1 libgcc-8-dev_8.1.0-11ubuntu1 libgcc1_1:8.1.0-11ubuntu1 libgcrypt20_1.8.3-1ubuntu1 libgd3_2.2.5-4 libgdbm-compat4_1.14.1-6 libgdbm5_1.14.1-6 libglib2.0-0_2.56.1-2ubuntu1 libgmp10_2:6.1.2+dfsg-3 libgnutls30_3.5.18-1ubuntu1 libgomp1_8.1.0-11ubuntu1 libgpg-error0_1.32-1 libgraphite2-3_1.3.11-2 libgts-0.7-5_0.7.6+darcs121130-4 libgvc6_2.40.1-3 libgvpr2_2.40.1-3 libharfbuzz0b_1.8.3-1 libhogweed4_3.4-1 libice6_2:1.0.9-2 libicu60_60.2-6ubuntu1 libidn11_1.33-2.1ubuntu1 libidn2-0_2.0.4-1.1build2 libip4tc0_1.6.1-2ubuntu2 libisl19_0.19-1 libitm1_8.1.0-11ubuntu1 libjbig0_2.1-3.1build1 libjpeg-turbo8_1.5.2-0ubuntu6 libjpeg8_8c-2ubuntu8 libjs-jquery_3.2.1-1 libjs-sphinxdoc_1.7.6-1 libjs-underscore_1.8.3~dfsg-1 libjson-c3_0.12.1-1.3 libkmod2_25-1ubuntu1 liblab-gamut1_2.40.1-3 libllvm6.0_1:6.0.1-2ubuntu1 liblockfile-bin_1.14-1.1 liblockfile1_1.14-1.1 liblsan0_8.1.0-11ubuntu1 libltdl7_2.4.6-2.1build1 liblz4-1_1.8.2-1ubuntu1 liblzma5_5.2.2-1.3 libmagic-mgc_1:5.33-3 libmagic1_1:5.33-3 libmount1_2.32-0.1ubuntu1 libmpc3_1.1.0-1 libmpfr6_4.0.1-1 libncurses5_6.1+20180210-4ubuntu1 libncurses6_6.1+20180210-4ubuntu1 libncursesw5_6.1+20180210-4ubuntu1 libncursesw6_6.1+20180210-4ubuntu1 libnettle6_3.4-1 libnpth0_1.6-1 libp11-kit0_0.23.12-2 libpam-modules_1.1.8-3.6ubuntu2 libpam-modules-bin_1.1.8-3.6ubuntu2 libpam-runtime_1.1.8-3.6ubuntu2 libpam0g_1.1.8-3.6ubuntu2 libpango-1.0-0_1.42.1-2 libpangocairo-1.0-0_1.42.1-2 libpangoft2-1.0-0_1.42.1-2 libpathplan4_2.40.1-3 libpcre3_2:8.39-10ubuntu2 libperl5.26_5.26.2-6 libpipeline1_1.5.0-1 libpixman-1-0_0.34.0-2 libpng16-16_1.6.34-2 libprocps6_2:3.3.12-3ubuntu1 libprocps7_2:3.3.15-2ubuntu1 libquadmath0_8.1.0-11ubuntu1 libreadline7_7.0-5 libseccomp2_2.3.3-3ubuntu1 libselinux1_2.8-1build1 libsemanage-common_2.8-1build1 libsemanage1_2.8-1build1 libsepol1_2.8-1 libsigsegv2_2.12-2 libslang2_2.3.2-1ubuntu1 libsm6_2:1.2.2-1 libsmartcols1_2.32-0.1ubuntu1 libsqlite3-0_3.24.0-1 libss2_1.44.3-1 libssl1.1_1.1.0g-2ubuntu5 libstdc++-7-dev_7.3.0-26ubuntu1 libstdc++-8-dev_8.1.0-11ubuntu1 libstdc++6_8.1.0-11ubuntu1 libsystemd0_238-5ubuntu2 libtasn1-6_4.13-3 libthai-data_0.1.27-2 libthai0_0.1.27-2 libtiff5_4.0.9-6 libtimedate-perl_2.3000-2 libtinfo5_6.1+20180210-4ubuntu1 libtinfo6_6.1+20180210-4ubuntu1 libtool_2.4.6-2.1build1 libtsan0_8.1.0-11ubuntu1 libubsan0_7.3.0-26ubuntu1 libubsan1_8.1.0-11ubuntu1 libudev1_238-5ubuntu2 libunistring2_0.9.9-0ubuntu1 libusb-0.1-4_2:0.1.12-32 libustr-1.0-1_1.0.4-6 libuuid1_2.32-0.1ubuntu1 libwebp6_0.6.1-2 libx11-6_2:1.6.5-1 libx11-data_2:1.6.5-1 libxapian30_1.4.6-2 libxau6_1:1.0.8-1 libxaw7_2:1.0.13-1 libxcb-render0_1.13-2 libxcb-shm0_1.13-2 libxcb1_1.13-2 libxdmcp6_1:1.1.2-3 libxext6_2:1.3.3-1 libxml2_2.9.4+dfsg1-7build1 libxmu6_2:1.1.2-2 libxpm4_1:3.5.12-1 libxrender1_1:0.9.10-1 libxt6_1:1.1.5-1 libzstd1_1.3.3+dfsg-2ubuntu1 linux-libc-dev_4.17.0-5.6 lockfile-progs_0.1.17build1 login_1:4.5-1ubuntu1 lsb-base_9.20170808ubuntu1 m4_1.4.18-1 make_4.2.1-1.1 man-db_2.8.3-2 mawk_1.3.3-17ubuntu3 mount_2.32-0.1ubuntu1 multiarch-support_2.27-3ubuntu1 ncurses-base_6.1+20180210-4ubuntu1 ncurses-bin_6.1+20180210-4ubuntu1 openssl_1.1.0g-2ubuntu5 optipng_0.7.6-1.1 passwd_1:4.5-1ubuntu1 patch_2.7.6-2ubuntu1 perl_5.26.2-6 perl-base_5.26.2-6 perl-modules-5.26_5.26.2-6 pinentry-curses_1.1.0-1build2 pkgbinarymangler_141 po-debconf_1.0.20 policyrcd-script-zg2_0.1-3 procps_2:3.3.15-2ubuntu1 readline-common_7.0-5 sbuild-build-depends-clustalo-dummy_0.invalid.0 sbuild-build-depends-core-dummy_0.invalid.0 sed_4.5-1 sensible-utils_0.0.12 sphinx-common_1.7.6-1 systemd_238-5ubuntu2 systemd-sysv_238-5ubuntu2 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.10ubuntu1 tar_1.30+dfsg-2 tzdata_2018e-1 ubuntu-keyring_2018.02.28 ucf_3.0038 util-linux_2.32-0.1ubuntu1 x11-common_1:7.7+19ubuntu8 xz-utils_5.2.2-1.3 zlib1g_1:1.2.11.dfsg-0ubuntu2 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- gpgv: Signature made Wed Jul 18 19:15:32 2018 UTC gpgv: using RSA key F1F007320A035541F0A663CA578A0494D1C646D1 gpgv: issuer "tille@debian.org" gpgv: Can't check signature: No public key dpkg-source: warning: failed to verify signature on ./clustalo_1.2.4-2.dsc dpkg-source: info: extracting clustalo in clustalo-1.2.4 dpkg-source: info: unpacking clustalo_1.2.4.orig.tar.gz dpkg-source: info: unpacking clustalo_1.2.4-2.debian.tar.xz Check disc space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-15144865 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-15144865 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-15144865 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- dpkg-buildpackage: info: source package clustalo dpkg-buildpackage: info: source version 1.2.4-2 dpkg-buildpackage: info: source distribution unstable dpkg-source --before-build clustalo-1.2.4 dpkg-buildpackage: info: host architecture ppc64el fakeroot debian/rules clean dh clean --with linktree debian/rules override_dh_clean make[1]: Entering directory '/<>' dh_clean rm -f _configs.sed rm -rf doc make[1]: Leaving directory '/<>' debian/rules build-arch dh build-arch --with linktree dh_update_autotools_config -a dh_autoreconf -a configure.ac:150: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5249: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... configure.ac:150: the top level configure.ac:150: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5249: _LT_LANG_C_CONFIG is expanded from... m4/libtool.m4:138: _LT_SETUP is expanded from... m4/libtool.m4:67: LT_INIT is expanded from... configure.ac:150: the top level configure.ac:172: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5356: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:785: _LT_LANG is expanded from... m4/libtool.m4:768: LT_LANG is expanded from... configure.ac:172: the top level configure.ac:150: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... 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configure.ac:172: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5356: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:785: _LT_LANG is expanded from... m4/libtool.m4:768: LT_LANG is expanded from... configure.ac:172: the top level configure.ac:150: warning: AC_LANG_CONFTEST: no AC_LANG_SOURCE call detected in body ../../lib/autoconf/lang.m4:193: AC_LANG_CONFTEST is expanded from... ../../lib/autoconf/general.m4:2672: _AC_LINK_IFELSE is expanded from... ../../lib/autoconf/general.m4:2689: AC_LINK_IFELSE is expanded from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:4170: _LT_LINKER_SHLIBS is expanded from... m4/libtool.m4:5249: 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from... m4/libtool.m4:1022: _LT_SYS_MODULE_PATH_AIX is expanded from... m4/libtool.m4:5356: _LT_LANG_CXX_CONFIG is expanded from... m4/libtool.m4:785: _LT_LANG is expanded from... m4/libtool.m4:768: LT_LANG is expanded from... configure.ac:172: the top level libtoolize: putting auxiliary files in '.'. libtoolize: copying file './ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' configure.ac:133: installing './compile' configure.ac:115: installing './missing' src/Makefile.am: installing './depcomp' dh_auto_configure -a ./configure --build=powerpc64le-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/powerpc64le-linux-gnu --libexecdir=\${prefix}/lib/powerpc64le-linux-gnu --runstatedir=/run --disable-maintainer-mode --disable-dependency-tracking configure: WARNING: unrecognized options: --disable-maintainer-mode configure: Welcome to Clustal Omega - version 1.2.4 (AndreaGiacomo) +NMMMMMMMMMS= MMMMM? :MMMMM8 IMMMMS MMMMM, ~MMMMN ,MMMMM =MMMMM MMMMM ?MMMMM +MMMMM MMMMMS MMMMM MMMMM MMMMM: MMMMM MMMMM+ MMMMM MMMMM~ MMMMM MMMMM MMMMMZ MMMMM MMMMM ,MMMMZ MMMM8 MMMM+ MMMMS MMMM, MMMMO MMMM ,N SMMM MMM8 +8 ,M7 M+ M+ :M8 ,MMMMMMMMMMMMI MMMMMMMMMMMM8 ,MMMMMMMMMMMM8 MMMMMMMMMMMM8 ,MMMMMMMMMMMMN MMMMMMMMMMMM8 checking for a BSD-compatible install... /usr/bin/install -c checking whether build environment is sane... yes checking for a thread-safe mkdir -p... /bin/mkdir -p checking for gawk... no checking for mawk... mawk checking whether make sets $(MAKE)... yes checking whether make supports nested variables... yes checking for style of include used by make... GNU checking for gcc... gcc checking whether the C compiler works... yes checking for C compiler default output file name... a.out checking for suffix of executables... checking whether we are cross compiling... no checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ISO C89... none needed checking whether gcc understands -c and -o together... yes checking dependency style of gcc... none checking how to run the C preprocessor... gcc -E checking for grep that handles long lines and -e... /bin/grep checking for egrep... /bin/grep -E checking for ANSI C header files... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking minix/config.h usability... no checking minix/config.h presence... no checking for minix/config.h... no checking whether it is safe to define __EXTENSIONS__... yes checking build system type... powerpc64le-unknown-linux-gnu checking host system type... powerpc64le-unknown-linux-gnu checking whether make sets $(MAKE)... (cached) yes checking how to print strings... printf checking for a sed that does not truncate output... /bin/sed checking for fgrep... /bin/grep -F checking for ld used by gcc... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B checking the name lister (/usr/bin/nm -B) interface... BSD nm checking whether ln -s works... yes checking the maximum length of command line arguments... 1572864 checking how to convert powerpc64le-unknown-linux-gnu file names to powerpc64le-unknown-linux-gnu format... func_convert_file_noop checking how to convert powerpc64le-unknown-linux-gnu file names to toolchain format... func_convert_file_noop checking for /usr/bin/ld option to reload object files... -r checking for objdump... objdump checking how to recognize dependent libraries... pass_all checking for dlltool... no checking how to associate runtime and link libraries... printf %s\n checking for ar... ar checking for archiver @FILE support... @ checking for strip... strip checking for ranlib... ranlib checking command to parse /usr/bin/nm -B output from gcc object... ok checking for sysroot... no checking for a working dd... /bin/dd checking how to truncate binary pipes... /bin/dd bs=4096 count=1 checking for mt... no checking if : is a manifest tool... no checking for dlfcn.h... yes checking for objdir... .libs checking if gcc supports -fno-rtti -fno-exceptions... no checking for gcc option to produce PIC... -fPIC -DPIC checking if gcc PIC flag -fPIC -DPIC works... yes checking if gcc static flag -static works... yes checking if gcc supports -c -o file.o... yes checking if gcc supports -c -o file.o... (cached) yes checking whether the gcc linker (/usr/bin/ld) supports shared libraries... yes checking whether -lc should be explicitly linked in... no checking dynamic linker characteristics... GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking whether stripping libraries is possible... yes checking if libtool supports shared libraries... yes checking whether to build shared libraries... yes checking whether to build static libraries... yes checking for gcc... (cached) gcc checking whether we are using the GNU C compiler... (cached) yes checking whether gcc accepts -g... (cached) yes checking for gcc option to accept ISO C89... (cached) none needed checking whether gcc understands -c and -o together... (cached) yes checking dependency style of gcc... (cached) none checking how to run the C preprocessor... gcc -E checking for g++... g++ checking whether we are using the GNU C++ compiler... yes checking whether g++ accepts -g... yes checking dependency style of g++... none checking how to run the C++ preprocessor... g++ -E checking for ld used by g++... /usr/bin/ld checking if the linker (/usr/bin/ld) is GNU ld... yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking for g++ option to produce PIC... -fPIC -DPIC checking if g++ PIC flag -fPIC -DPIC works... yes checking if g++ static flag -static works... yes checking if g++ supports -c -o file.o... yes checking if g++ supports -c -o file.o... (cached) yes checking whether the g++ linker (/usr/bin/ld) supports shared libraries... yes checking dynamic linker characteristics... (cached) GNU/Linux ld.so checking how to hardcode library paths into programs... immediate checking how to run the C++ preprocessor... g++ -E checking for ANSI C header files... (cached) yes checking assert.h usability... yes checking assert.h presence... yes checking for assert.h... yes checking ctype.h usability... yes checking ctype.h presence... yes checking for ctype.h... yes checking float.h usability... yes checking float.h presence... yes checking for float.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking math.h usability... yes checking math.h presence... yes checking for math.h... yes checking for memory.h... (cached) yes checking stdarg.h usability... yes checking stdarg.h presence... yes checking for stdarg.h... yes checking stdio.h usability... yes checking stdio.h presence... yes checking for stdio.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking time.h usability... yes checking time.h presence... yes checking for time.h... yes checking for unistd.h... (cached) yes checking for an ANSI C-conforming const... yes checking for size_t... yes checking for inline... inline checking for log in -lm... yes checking for log2 in -lm... yes checking argtable2.h usability... yes checking argtable2.h presence... yes checking for argtable2.h... yes checking for arg_parse in -largtable2... yes checking for OpenMP flag of C compiler... -fopenmp checking whether byte ordering is bigendian... no checking for ntohs... yes checking for ntohl... yes checking for ntons... no checking for ntonl... no checking size of unsigned short... 2 checking size of unsigned int... 4 checking size of unsigned long... 8 checking size of unsigned long long... 8 checking for stroul... no checking for strtoull... yes checking for ftello... yes checking for fseeko... yes checking for ftello64... yes checking for fseeko64... yes checking for ftell64... no checking for fseek64... no checking for off_t... yes checking size of fpos_t... 16 checking if malloc debugging is wanted... no checking whether to build with debug information... no checking that generated files are newer than configure... done configure: creating ./config.status config.status: creating Makefile config.status: creating src/Makefile config.status: creating clustalo.pc config.status: creating Doxyfile config.status: creating src/clustal/Makefile config.status: creating src/hhalign/Makefile config.status: creating src/kmpp/Makefile config.status: creating src/squid/Makefile config.status: creating src/config.h config.status: executing src/clustal-omega-config.h commands config.status: creating src/clustal-omega-config.h - prefix CLUSTAL_OMEGA for src/config.h defines config.status: executing depfiles commands config.status: executing libtool commands configure: WARNING: unrecognized options: --disable-maintainer-mode dh_auto_build -a make -j4 make[1]: Entering directory '/<>' Making all in src make[2]: Entering directory '/<>/src' make all-recursive make[3]: Entering directory '/<>/src' Making all in hhalign make[4]: Entering directory '/<>/src/hhalign' /bin/bash ../../libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -DCLUSTALO -DCLUSTALO_NOFILE -DDEFAULT_FILTER=90 -fopenmp -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o hhalign.lo hhalign.cpp libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -DCLUSTALO -DCLUSTALO_NOFILE -DDEFAULT_FILTER=90 -fopenmp -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c hhalign.cpp -fPIC -DPIC -o .libs/hhalign.o libtool: compile: g++ -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -fno-strict-aliasing -DCLUSTALO -DCLUSTALO_NOFILE -DDEFAULT_FILTER=90 -fopenmp -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c hhalign.cpp -o hhalign.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CXX --mode=link g++ -fno-strict-aliasing -DCLUSTALO -DCLUSTALO_NOFILE -DDEFAULT_FILTER=90 -fopenmp -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libhhalign.la hhalign.lo -largtable2 -lm libtool: link: ar cru .libs/libhhalign.a .libs/hhalign.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libhhalign.a libtool: link: ( cd ".libs" && rm -f "libhhalign.la" && ln -s "../libhhalign.la" "libhhalign.la" ) make[4]: Leaving directory '/<>/src/hhalign' Making all in squid make[4]: Entering directory '/<>/src/squid' /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o a2m.lo a2m.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o aligneval.lo aligneval.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o alignio.lo alignio.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o clustal.lo clustal.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c alignio.c -fPIC -DPIC -o .libs/alignio.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligneval.c -fPIC -DPIC -o .libs/aligneval.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c a2m.c -fPIC -DPIC -o .libs/a2m.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c clustal.c -fPIC -DPIC -o .libs/clustal.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c a2m.c -o a2m.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o cluster.lo cluster.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c aligneval.c -o aligneval.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c clustal.c -o clustal.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cluster.c -fPIC -DPIC -o .libs/cluster.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c alignio.c -o alignio.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o dayhoff.lo dayhoff.c /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o eps.lo eps.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c cluster.c -o cluster.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c dayhoff.c -fPIC -DPIC -o .libs/dayhoff.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c eps.c -fPIC -DPIC -o .libs/eps.o libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c dayhoff.c -o dayhoff.o >/dev/null 2>&1 libtool: compile: gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c eps.c -o eps.o >/dev/null 2>&1 /bin/bash ../../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -I../../src -Wdate-time -D_FORTIFY_SOURCE=2 -DCLUSTALO -O3 -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o file.lo file.c /bin/bash ../../libtool --tag=CC --mode=compile 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.libs/libclustal.a .libs/hhalign_wrapper.o .libs/ktuple_pair.o .libs/list.o .libs/log.o .libs/muscle_upgma.o .libs/muscle_tree.o .libs/mbed.o .libs/pair_dist.o .libs/progress.o .libs/seq.o .libs/symmatrix.o .libs/tree.o .libs/util.o .libs/weights.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libclustal.a libtool: link: ( cd ".libs" && rm -f "libclustal.la" && ln -s "../libclustal.la" "libclustal.la" ) make[4]: Leaving directory '/<>/src/clustal' make[4]: Entering directory '/<>/src' /bin/bash ../libtool --tag=CC --mode=compile gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o clustal-omega.lo clustal-omega.c g++ -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o main.o main.cpp gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c -o mymain.o mymain.c libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c clustal-omega.c -fPIC -DPIC -o .libs/clustal-omega.o clustal-omega.c: In function ‘PrintLongVersion’: clustal-omega.c:152:49: warning: macro "__DATE__" might prevent reproducible builds [-Wdate-time] PACKAGE_VERSION, PACKAGE_CODENAME, __DATE__); ^~~~~~~~ libtool: compile: gcc -DHAVE_CONFIG_H -I. -Wdate-time -D_FORTIFY_SOURCE=2 -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -c clustal-omega.c -o clustal-omega.o >/dev/null 2>&1 /bin/bash ../libtool --tag=CC --mode=link gcc -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -static -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o libclustalo.la -rpath /usr/lib/powerpc64le-linux-gnu clustal-omega.lo clustal/libclustal.la hhalign/libhhalign.la squid/libsquid.la kmpp/libkmpp.la -largtable2 -lm libtool: link: (cd .libs/libclustalo.lax/libclustal.a && ar x "/<>/src/clustal/.libs/libclustal.a") libtool: link: (cd .libs/libclustalo.lax/libhhalign.a && ar x "/<>/src/hhalign/.libs/libhhalign.a") libtool: link: (cd .libs/libclustalo.lax/libsquid.a && ar x "/<>/src/squid/.libs/libsquid.a") libtool: link: (cd .libs/libclustalo.lax/libkmpp.a && ar x "/<>/src/kmpp/.libs/libkmpp.a") libtool: link: ar cru .libs/libclustalo.a clustal-omega.o .libs/libclustalo.lax/libclustal.a/hhalign_wrapper.o .libs/libclustalo.lax/libclustal.a/ktuple_pair.o .libs/libclustalo.lax/libclustal.a/list.o .libs/libclustalo.lax/libclustal.a/log.o .libs/libclustalo.lax/libclustal.a/mbed.o .libs/libclustalo.lax/libclustal.a/muscle_tree.o .libs/libclustalo.lax/libclustal.a/muscle_upgma.o .libs/libclustalo.lax/libclustal.a/pair_dist.o .libs/libclustalo.lax/libclustal.a/progress.o .libs/libclustalo.lax/libclustal.a/seq.o .libs/libclustalo.lax/libclustal.a/symmatrix.o .libs/libclustalo.lax/libclustal.a/tree.o .libs/libclustalo.lax/libclustal.a/util.o .libs/libclustalo.lax/libclustal.a/weights.o .libs/libclustalo.lax/libhhalign.a/hhalign.o .libs/libclustalo.lax/libsquid.a/a2m.o .libs/libclustalo.lax/libsquid.a/aligneval.o .libs/libclustalo.lax/libsquid.a/alignio.o .libs/libclustalo.lax/libsquid.a/clustal.o .libs/libclustalo.lax/libsquid.a/cluster.o .libs/libclustalo.lax/libsquid.a/dayhoff.o .libs/libclustalo.lax/libsquid.a/eps.o .libs/libclustalo.lax/libsquid.a/file.o .libs/libclustalo.lax/libsquid.a/getopt.o .libs/libclustalo.lax/libsquid.a/gki.o .libs/libclustalo.lax/libsquid.a/gsi.o .libs/libclustalo.lax/libsquid.a/gsi64.o .libs/libclustalo.lax/libsquid.a/hsregex.o .libs/libclustalo.lax/libsquid.a/iupac.o .libs/libclustalo.lax/libsquid.a/msa.o .libs/libclustalo.lax/libsquid.a/msf.o .libs/libclustalo.lax/libsquid.a/phylip.o .libs/libclustalo.lax/libsquid.a/revcomp.o .libs/libclustalo.lax/libsquid.a/rk.o .libs/libclustalo.lax/libsquid.a/selex.o .libs/libclustalo.lax/libsquid.a/seqencode.o .libs/libclustalo.lax/libsquid.a/shuffle.o .libs/libclustalo.lax/libsquid.a/sqerror.o .libs/libclustalo.lax/libsquid.a/sqio.o .libs/libclustalo.lax/libsquid.a/squidcore.o .libs/libclustalo.lax/libsquid.a/sre_ctype.o .libs/libclustalo.lax/libsquid.a/sre_math.o .libs/libclustalo.lax/libsquid.a/sre_random.o .libs/libclustalo.lax/libsquid.a/sre_string.o .libs/libclustalo.lax/libsquid.a/ssi.o .libs/libclustalo.lax/libsquid.a/stack.o .libs/libclustalo.lax/libsquid.a/stockholm.o .libs/libclustalo.lax/libsquid.a/stopwatch.o .libs/libclustalo.lax/libsquid.a/translate.o .libs/libclustalo.lax/libsquid.a/types.o .libs/libclustalo.lax/libsquid.a/vectorops.o .libs/libclustalo.lax/libsquid.a/weight.o .libs/libclustalo.lax/libkmpp.a/KMeans.o .libs/libclustalo.lax/libkmpp.a/KmTree.o .libs/libclustalo.lax/libkmpp.a/KmUtils.o ar: `u' modifier ignored since `D' is the default (see `U') libtool: link: ranlib .libs/libclustalo.a libtool: link: rm -fr .libs/libclustalo.lax libtool: link: ( cd ".libs" && rm -f "libclustalo.la" && ln -s "../libclustalo.la" "libclustalo.la" ) /bin/bash ../libtool --tag=CXX --mode=link g++ -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z,relro -Wl,-z,now -o clustalo main.o mymain.o libclustalo.la -largtable2 -lm libtool: link: g++ -O3 -fopenmp -g -O3 -fdebug-prefix-map=/<>=. -fstack-protector-strong -Wformat -Werror=format-security -Wl,-Bsymbolic-functions -Wl,-z -Wl,relro -Wl,-z -Wl,now -o clustalo main.o mymain.o ./.libs/libclustalo.a /usr/lib/powerpc64le-linux-gnu/libargtable2.so -lm -fopenmp /usr/bin/ld: ./.libs/libclustalo.a(clustal-omega.o): in function `AlnToHHMFile': ./src/clustal-omega.c:393: warning: the use of `mktemp' is dangerous, better use `mkstemp' or `mkdtemp' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'all-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_auto_test -a make -j4 check VERBOSE=1 make[1]: Entering directory '/<>' Making check in src make[2]: Entering directory '/<>/src' Making check in hhalign make[3]: Entering directory '/<>/src/hhalign' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/hhalign' Making check in squid make[3]: Entering directory '/<>/src/squid' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/squid' Making check in kmpp make[3]: Entering directory '/<>/src/kmpp' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/kmpp' Making check in clustal make[3]: Entering directory '/<>/src/clustal' make[3]: Nothing to be done for 'check'. make[3]: Leaving directory '/<>/src/clustal' make[3]: Entering directory '/<>/src' make[3]: Leaving directory '/<>/src' make[2]: Leaving directory '/<>/src' make[2]: Entering directory '/<>' make[2]: Nothing to be done for 'check-am'. make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' create-stamp debian/debhelper-build-stamp fakeroot debian/rules binary-arch dh binary-arch --with linktree dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install-arch make[1]: Entering directory '/<>' dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' Making install in src make[3]: Entering directory '/<>/src' Making install in hhalign make[4]: Entering directory '/<>/src/hhalign' make[5]: Entering directory '/<>/src/hhalign' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/include/clustalo/hhalign' /usr/bin/install -c -m 644 general.h hhfunc.h '/<>/debian/tmp/usr/include/clustalo/hhalign' make[5]: Leaving directory '/<>/src/hhalign' make[4]: Leaving directory '/<>/src/hhalign' Making install in squid make[4]: Entering directory '/<>/src/squid' make[5]: Entering directory '/<>/src/squid' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/include/clustalo/squid' /usr/bin/install -c -m 644 gki.h gsi64.h msa.h rk.h squid.h stopwatch.h sqfuncs.h sre_random.h ssi.h stockholm.h vectorops.h version.h '/<>/debian/tmp/usr/include/clustalo/squid' make[5]: Leaving directory '/<>/src/squid' make[4]: Leaving directory '/<>/src/squid' Making install in kmpp make[4]: Entering directory '/<>/src/kmpp' make[5]: Entering directory '/<>/src/kmpp' make[5]: Nothing to be done for 'install-exec-am'. make[5]: Nothing to be done for 'install-data-am'. make[5]: Leaving directory '/<>/src/kmpp' make[4]: Leaving directory '/<>/src/kmpp' Making install in clustal make[4]: Entering directory '/<>/src/clustal' make[5]: Entering directory '/<>/src/clustal' make[5]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/include/clustalo/clustal' /usr/bin/install -c -m 644 hhalign_wrapper.h ktuple_pair.h log.h mbed.h muscle_tree.h pair_dist.h progress.h seq.h symmatrix.h tree.h util.h weights.h '/<>/debian/tmp/usr/include/clustalo/clustal' make[5]: Leaving directory '/<>/src/clustal' make[4]: Leaving directory '/<>/src/clustal' make[4]: Entering directory '/<>/src' make[5]: Entering directory '/<>/src' /bin/mkdir -p '/<>/debian/tmp/usr/lib/powerpc64le-linux-gnu' /bin/bash ../libtool --mode=install /usr/bin/install -c libclustalo.la '/<>/debian/tmp/usr/lib/powerpc64le-linux-gnu' libtool: install: /usr/bin/install -c .libs/libclustalo.lai /<>/debian/tmp/usr/lib/powerpc64le-linux-gnu/libclustalo.la libtool: install: /usr/bin/install -c .libs/libclustalo.a /<>/debian/tmp/usr/lib/powerpc64le-linux-gnu/libclustalo.a libtool: install: chmod 644 /<>/debian/tmp/usr/lib/powerpc64le-linux-gnu/libclustalo.a libtool: install: ranlib /<>/debian/tmp/usr/lib/powerpc64le-linux-gnu/libclustalo.a libtool: warning: remember to run 'libtool --finish /usr/lib/powerpc64le-linux-gnu' /bin/mkdir -p '/<>/debian/tmp/usr/bin' /bin/bash ../libtool --mode=install /usr/bin/install -c clustalo '/<>/debian/tmp/usr/bin' libtool: install: /usr/bin/install -c clustalo /<>/debian/tmp/usr/bin/clustalo /bin/mkdir -p '/<>/debian/tmp/usr/include/clustalo/' /usr/bin/install -c -m 644 clustal-omega-config.h clustal-omega.h '/<>/debian/tmp/usr/include/clustalo/' make[5]: Leaving directory '/<>/src' make[4]: Leaving directory '/<>/src' make[3]: Leaving directory '/<>/src' make[3]: Entering directory '/<>' make[4]: Entering directory '/<>' make[4]: Nothing to be done for 'install-exec-am'. /bin/mkdir -p '/<>/debian/tmp/usr/share/doc/clustal-omega' /usr/bin/install -c -m 644 README '/<>/debian/tmp/usr/share/doc/clustal-omega' /bin/mkdir -p '/<>/debian/tmp/usr/lib/powerpc64le-linux-gnu/pkgconfig' /usr/bin/install -c -m 644 clustalo.pc '/<>/debian/tmp/usr/lib/powerpc64le-linux-gnu/pkgconfig' make[4]: Leaving directory '/<>' make[3]: Leaving directory '/<>' make[2]: Leaving directory '/<>' rm -rf debian/tmp/usr/lib/pkgconfig rm -f debian/tmp/usr/lib/*/libclustalo.la mv debian/tmp/usr/include debian/libclustalo-dev/usr mv debian/tmp/usr/lib debian/libclustalo-dev/usr mv debian/tmp/usr/bin debian/clustalo/usr make[1]: Leaving directory '/<>' dh_install -a dh_installdocs -a dh_installchangelogs -a dh_installexamples -a dh_installman -a dh_perl -a dh_link -a dh_linktree -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_missing -a dh_strip -a dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: Depends field of package libclustalo-dev: unknown substitution variable ${shlibs:Depends} dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 141 INFO: pkgstriptranslations version 141 INFO: pkgstriptranslations version 141 pkgstriptranslations: processing clustalo (in debian/clustalo); do_strip: , oemstrip: pkgstriptranslations: processing libclustalo-dev (in debian/libclustalo-dev); do_strip: , oemstrip: pkgstriptranslations: processing clustalo-dbgsym (in debian/.debhelper/clustalo/dbgsym-root); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/clustalo/DEBIAN/control, package clustalo, directory debian/clustalo pkgstripfiles: Running PNG optimization (using 4 cpus) for package clustalo ... pkgstripfiles: No PNG files. pkgstripfiles: processing control file: debian/libclustalo-dev/DEBIAN/control, package libclustalo-dev, directory debian/libclustalo-dev dpkg-deb: building package 'clustalo' in '../clustalo_1.2.4-2_ppc64el.deb'. Searching for duplicated docs in dependency clustalo... symlinking changelog.Debian.gz in libclustalo-dev to file in clustalo pkgstripfiles: Running PNG optimization (using 4 cpus) for package libclustalo-dev ... pkgstripfiles: No PNG files. dpkg-deb: building package 'libclustalo-dev' in '../libclustalo-dev_1.2.4-2_ppc64el.deb'. pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/.debhelper/clustalo/dbgsym-root/DEBIAN/control, package clustalo-dbgsym, directory debian/.debhelper/clustalo/dbgsym-root dpkg-deb: building package 'clustalo-dbgsym' in 'debian/.debhelper/scratch-space/build-clustalo/clustalo-dbgsym_1.2.4-2_ppc64el.deb'. Renaming clustalo-dbgsym_1.2.4-2_ppc64el.deb to clustalo-dbgsym_1.2.4-2_ppc64el.ddeb dpkg-genbuildinfo --build=any dpkg-genchanges --build=any -mLaunchpad Build Daemon >../clustalo_1.2.4-2_ppc64el.changes dpkg-genchanges: info: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build clustalo-1.2.4 dpkg-buildpackage: info: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 20180718-2313 Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Post Build Chroot | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ clustalo_1.2.4-2_ppc64el.changes: --------------------------------- Format: 1.8 Date: Wed, 18 Jul 2018 21:11:52 +0200 Source: clustalo Binary: clustalo libclustalo-dev libclustalo-doc Architecture: ppc64el Version: 1.2.4-2 Distribution: cosmic-proposed Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: clustalo - General purpose multiple sequence alignment program for proteins libclustalo-dev - library to embed Clustal Omega libclustalo-doc - API documentation for library to embed Clustal Omega Changes: clustalo (1.2.4-2) unstable; urgency=medium . * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.5 Checksums-Sha1: 462bf14f839e6069c47f491b015153770276f267 837664 clustalo-dbgsym_1.2.4-2_ppc64el.ddeb 76981bc36239061658a43205b4de2a3ff9e4599e 7272 clustalo_1.2.4-2_ppc64el.buildinfo 54c2b059c64e9d98ae4cf2c19aa4e524d66aeff6 302036 clustalo_1.2.4-2_ppc64el.deb 1e6e6a05b6ba877064fbf2c4865cdc4a43524356 366968 libclustalo-dev_1.2.4-2_ppc64el.deb Checksums-Sha256: 6fb9a778afb857d510b830ae5e4b6e9aad0fb82e9bfdc4d03e3d1d40e5fa993f 837664 clustalo-dbgsym_1.2.4-2_ppc64el.ddeb d9540567ca0823250c0db1fb59aadb2048771fba437e171067fdbb659c356ca8 7272 clustalo_1.2.4-2_ppc64el.buildinfo 9678064446f479d2c5c55434153cd37a6b65ac875400275da69906cbc1a372cd 302036 clustalo_1.2.4-2_ppc64el.deb 3d79a7ed48e968a672c4560cd6de413c06b8e850a73a4c0303a6fae1c94afd0d 366968 libclustalo-dev_1.2.4-2_ppc64el.deb Files: 04dd9a5db7af085af260fbe088608cd5 837664 debug optional clustalo-dbgsym_1.2.4-2_ppc64el.ddeb 356779cdc49733ecc46eac3099ded9d5 7272 science optional clustalo_1.2.4-2_ppc64el.buildinfo 00afbab536c49d98c90721a2cfc95cec 302036 science optional clustalo_1.2.4-2_ppc64el.deb ea8b7467aae2d81f08259ae463a69438 366968 libdevel optional libclustalo-dev_1.2.4-2_ppc64el.deb +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ clustalo_1.2.4-2_ppc64el.deb ---------------------------- new debian package, version 2.0. size 302036 bytes: control archive=896 bytes. 731 bytes, 15 lines control 406 bytes, 6 lines md5sums Package: clustalo Version: 1.2.4-2 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 865 Depends: libargtable2-0 (>= 7), libc6 (>= 2.27), libgcc1 (>= 1:3.0), libgomp1 (>= 4.9), libstdc++6 (>= 5.2) Section: science Priority: optional Homepage: http://www.clustal.org/omega/ Description: General purpose multiple sequence alignment program for proteins Clustal-Omega is a general purpose multiple sequence alignment (MSA) program for dna/rna/proteins. It produces high quality MSAs and is capable of handling data-sets of hundreds of thousands of sequences in reasonable time. drwxr-xr-x root/root 0 2018-07-18 19:11 ./ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/bin/ -rwxr-xr-x root/root 855568 2018-07-18 19:11 ./usr/bin/clustalo drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/doc/clustalo/ -rw-r--r-- root/root 10994 2013-08-27 12:07 ./usr/share/doc/clustalo/README.gz -rw-r--r-- root/root 893 2018-07-18 19:11 ./usr/share/doc/clustalo/changelog.Debian.gz -rw-r--r-- root/root 1174 2018-07-18 19:11 ./usr/share/doc/clustalo/copyright drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/doc/clustalo/examples/ -rw-r--r-- root/root 2269 2018-07-18 19:11 ./usr/share/doc/clustalo/examples/example.fa drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/man/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/man/man1/ -rw-r--r-- root/root 1083 2018-07-18 19:11 ./usr/share/man/man1/clustalo.1.gz libclustalo-dev_1.2.4-2_ppc64el.deb ----------------------------------- new debian package, version 2.0. size 366968 bytes: control archive=1524 bytes. 586 bytes, 16 lines control 2252 bytes, 31 lines md5sums Package: libclustalo-dev Source: clustalo Version: 1.2.4-2 Architecture: ppc64el Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 1619 Depends: libargtable2-dev, clustalo (= 1.2.4-2) Suggests: libclustalo-doc Section: libdevel Priority: optional Homepage: http://www.clustal.org/omega/ Description: library to embed Clustal Omega This package contains headers and libraries to include Clustal Omega in a program. It provides clustal usage with an API. drwxr-xr-x root/root 0 2018-07-18 19:11 ./ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/include/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/include/clustalo/ -rw-r--r-- root/root 9523 2018-07-18 19:11 ./usr/include/clustalo/clustal-omega-config.h -rw-r--r-- root/root 4740 2018-07-18 19:11 ./usr/include/clustalo/clustal-omega.h drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/include/clustalo/clustal/ -rw-r--r-- root/root 1159 2018-07-18 19:11 ./usr/include/clustalo/clustal/hhalign_wrapper.h -rw-r--r-- root/root 1251 2018-07-18 19:11 ./usr/include/clustalo/clustal/ktuple_pair.h -rw-r--r-- root/root 1787 2018-07-18 19:11 ./usr/include/clustalo/clustal/log.h -rw-r--r-- root/root 866 2018-07-18 19:11 ./usr/include/clustalo/clustal/mbed.h -rw-r--r-- root/root 4112 2018-07-18 19:11 ./usr/include/clustalo/clustal/muscle_tree.h -rw-r--r-- root/root 1303 2018-07-18 19:11 ./usr/include/clustalo/clustal/pair_dist.h -rw-r--r-- root/root 1257 2018-07-18 19:11 ./usr/include/clustalo/clustal/progress.h -rw-r--r-- root/root 4032 2018-07-18 19:11 ./usr/include/clustalo/clustal/seq.h -rw-r--r-- root/root 2310 2018-07-18 19:11 ./usr/include/clustalo/clustal/symmatrix.h -rw-r--r-- root/root 1066 2018-07-18 19:11 ./usr/include/clustalo/clustal/tree.h -rw-r--r-- root/root 2308 2018-07-18 19:11 ./usr/include/clustalo/clustal/util.h -rw-r--r-- root/root 741 2018-07-18 19:11 ./usr/include/clustalo/clustal/weights.h drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/include/clustalo/hhalign/ -rw-r--r-- root/root 2961 2018-07-18 19:11 ./usr/include/clustalo/hhalign/general.h -rw-r--r-- root/root 859 2018-07-18 19:11 ./usr/include/clustalo/hhalign/hhfunc.h drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/include/clustalo/squid/ -rw-r--r-- root/root 1381 2018-07-18 19:11 ./usr/include/clustalo/squid/gki.h -rw-r--r-- root/root 3473 2018-07-18 19:11 ./usr/include/clustalo/squid/gsi64.h -rw-r--r-- root/root 13442 2018-07-18 19:11 ./usr/include/clustalo/squid/msa.h -rw-r--r-- root/root 1264 2018-07-18 19:11 ./usr/include/clustalo/squid/rk.h -rw-r--r-- root/root 10390 2018-07-18 19:11 ./usr/include/clustalo/squid/sqfuncs.h -rw-r--r-- root/root 19594 2018-07-18 19:11 ./usr/include/clustalo/squid/squid.h -rw-r--r-- root/root 489 2018-07-18 19:11 ./usr/include/clustalo/squid/sre_random.h -rw-r--r-- root/root 7610 2018-07-18 19:11 ./usr/include/clustalo/squid/ssi.h -rw-r--r-- root/root 1868 2018-07-18 19:11 ./usr/include/clustalo/squid/stockholm.h -rw-r--r-- root/root 1937 2018-07-18 19:11 ./usr/include/clustalo/squid/stopwatch.h -rw-r--r-- root/root 1434 2018-07-18 19:11 ./usr/include/clustalo/squid/vectorops.h -rw-r--r-- root/root 333 2018-07-18 19:11 ./usr/include/clustalo/squid/version.h drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/lib/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/lib/powerpc64le-linux-gnu/ -rw-r--r-- root/root 1518706 2018-07-18 19:11 ./usr/lib/powerpc64le-linux-gnu/libclustalo.a drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/lib/powerpc64le-linux-gnu/pkgconfig/ -rw-r--r-- root/root 252 2018-07-18 19:11 ./usr/lib/powerpc64le-linux-gnu/pkgconfig/clustalo.pc drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/doc/ drwxr-xr-x root/root 0 2018-07-18 19:11 ./usr/share/doc/libclustalo-dev/ lrwxrwxrwx root/root 0 2018-07-18 19:11 ./usr/share/doc/libclustalo-dev/changelog.Debian.gz -> ../clustalo/changelog.Debian.gz -rw-r--r-- root/root 1174 2018-07-18 19:11 ./usr/share/doc/libclustalo-dev/copyright +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: ppc64el Build-Space: 46332 Build-Time: 76 Distribution: cosmic-proposed Host Architecture: ppc64el Install-Time: 22 Job: clustalo_1.2.4-2.dsc Machine Architecture: ppc64el Package: clustalo Package-Time: 98 Source-Version: 1.2.4-2 Space: 46332 Status: successful Version: 1.2.4-2 -------------------------------------------------------------------------------- Finished at 20180718-2313 Build needed 00:01:38, 46332k disc space RUN: /usr/share/launchpad-buildd/slavebin/in-target scan-for-processes --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 Scanning for processes to kill in build PACKAGEBUILD-15144865 RUN: /usr/share/launchpad-buildd/slavebin/in-target umount-chroot --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 Stopping target for build PACKAGEBUILD-15144865 RUN: /usr/share/launchpad-buildd/slavebin/in-target remove-build --backend=chroot --series=cosmic --arch=ppc64el PACKAGEBUILD-15144865 Removing build PACKAGEBUILD-15144865