Ubuntu
clonalframe package

clonalframe 1.2-10build1 source package in Ubuntu

Changelog

clonalframe (1.2-10build1) focal; urgency=medium

  * No-change rebuild for libgcc-s1 package name change.

 -- Matthias Klose <email address hidden>  Sun, 22 Mar 2020 16:36:14 +0100

Upload details

Uploaded by:
Matthias Klose
Uploaded to:
Focal
Original maintainer:
Debian Med
Architectures:
any
Section:
science
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Focal release universe science

Downloads

File Size SHA-256 Checksum
clonalframe_1.2.orig.tar.gz 44.4 KiB eded106eb6193acd47eef20ae43d6cdcf64ca26aee89f7d81f49d894847f1b67
clonalframe_1.2-10build1.debian.tar.xz 5.7 KiB 002ee5749fc5a73720574bf86091c0ea98e1442130f42dad6815620a231f3ede
clonalframe_1.2-10build1.dsc 2.0 KiB 94999c786a4bc8afc5de637232967a90a0be60b3e57911248851af33512cf45e

Available diffs

View changes file

Binary packages built by this source

clonalframe: inference of bacterial microevolution using multilocus sequence data

 ClonalFrame identifies the clonal relationships between the members of
 a sample, while also estimating the chromosomal position of homologous
 recombination events that have disrupted the clonal inheritance.
 .
 ClonalFrame can be applied to any kind of sequence data, from a single
 fragment of DNA to whole genomes. It is well suited for the analysis of
 MLST data, where 7 gene fragments have been sequenced, but becomes
 progressively more powerful as the sequenced regions increase in length
 and number up to whole genomes. However, it requires the sequences to be
 aligned. If you have genomic data that is not aligned, it is recommend to
 use Mauve which produces alignment of whole bacterial genomes in
 exactly the format required for analysis with ClonalFrame.

clonalframe-dbgsym: debug symbols for clonalframe