Ubuntu
centrifuge package

centrifuge 1.0.3-12build1 source package in Ubuntu

Changelog

centrifuge (1.0.3-12build1) noble; urgency=medium

  * No-change rebuild for CVE-2024-3094

 -- William Grant <email address hidden>  Mon, 01 Apr 2024 16:37:28 +1100

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Uploaded by:
William Grant
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc

Downloads

File Size SHA-256 Checksum
centrifuge_1.0.3.orig.tar.gz 684.8 KiB 71340f5c0c20dd4f7c4d98ea87f9edcbb1443fff8434e816a5465cbebaca9343
centrifuge_1.0.3-12build1.debian.tar.xz 15.1 KiB d7201230bb68d72685ace74571e0db51ab31a20f2d4a85b5d38b8d3a85c7d538
centrifuge_1.0.3-12build1.dsc 2.1 KiB c4209e47cdb702074b2b4ecfdf74632b74e0a6a77aad9c7e8c7438fdfb0592fc

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Binary packages built by this source

centrifuge: rapid and memory-efficient system for classification of DNA sequences

 Centrifuge is a very rapid and memory-efficient system for the
 classification of DNA sequences from microbial samples, with better
 sensitivity than and comparable accuracy to other leading systems. The
 system uses a novel indexing scheme based on the Burrows-Wheeler
 transform (BWT) and the Ferragina-Manzini (FM) index, optimized
 specifically for the metagenomic classification problem. Centrifuge
 requires a relatively small index (e.g., 4.3 GB for ~4,100 bacterial
 genomes) yet provides very fast classification speed, allowing it to
 process a typical DNA sequencing run within an hour. Together these
 advances enable timely and accurate analysis of large metagenomics data
 sets on conventional desktop computers.

centrifuge-dbgsym: debug symbols for centrifuge