centrifuge 1.0.3-10 source package in Ubuntu
Changelog
centrifuge (1.0.3-10) unstable; urgency=medium * Really fix watch file -- Andreas Tille <email address hidden> Sun, 05 Dec 2021 21:16:55 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Jammy | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| centrifuge_1.0.3-10.dsc | 2.0 KiB | 54e0edd3584bdbb8cf9276a2c8d173bc13c9c531899d35bf766d14631c40d0f3 |
| centrifuge_1.0.3.orig.tar.gz | 684.8 KiB | 71340f5c0c20dd4f7c4d98ea87f9edcbb1443fff8434e816a5465cbebaca9343 |
| centrifuge_1.0.3-10.debian.tar.xz | 14.3 KiB | 6bc0d1ac340554bb4db925a246ba48a942d50256dafb27353e5b41d2a2359111 |
Available diffs
- diff from 1.0.3-9 to 1.0.3-10 (400 bytes)
No changes file available.
Binary packages built by this source
- centrifuge: rapid and memory-efficient system for classification of DNA sequences
Centrifuge is a very rapid and memory-efficient system for the
classification of DNA sequences from microbial samples, with better
sensitivity than and comparable accuracy to other leading systems. The
system uses a novel indexing scheme based on the Burrows-Wheeler
transform (BWT) and the Ferragina-Manzini (FM) index, optimized
specifically for the metagenomic classification problem. Centrifuge
requires a relatively small index (e.g., 4.3 GB for ~4,100 bacterial
genomes) yet provides very fast classification speed, allowing it to
process a typical DNA sequencing run within an hour. Together these
advances enable timely and accurate analysis of large metagenomics data
sets on conventional desktop computers.
- centrifuge-dbgsym: debug symbols for centrifuge
