biobambam2 2.0.185+ds-2 source package in Ubuntu
Changelog
biobambam2 (2.0.185+ds-2) unstable; urgency=medium
* d/watch: repair gitlab watch file.
This instructs uscan to use git ls-remote mode.
* d/control: declare compliance to standards version 4.7.0.
* d/control: move from pkg-config to pkgconf.
-- Étienne Mollier <email address hidden> Fri, 19 Apr 2024 17:24:26 +0200
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Oracular | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| biobambam2_2.0.185+ds-2.dsc | 2.2 KiB | 35aee0fb59ea4df94d05d825131b564fd8b52c8a31182eb93a0b370aee827e07 |
| biobambam2_2.0.185+ds.orig.tar.xz | 243.2 KiB | 90cc8328f4e78771cf87cc918d890d12073cbbfbcad7cf94e35b655e3ec2747a |
| biobambam2_2.0.185+ds-2.debian.tar.xz | 1008.2 KiB | 5010ff92699f48db055e33a6ddda005ed339388cc1995503e985325e4d53652c |
Available diffs
- diff from 2.0.185+ds-1 to 2.0.185+ds-2 (809 bytes)
No changes file available.
Binary packages built by this source
- biobambam2: tools for early stage alignment file processing
This package contains some tools for processing BAM files, including
.
bamsormadup: parallel sorting and duplicate marking
bamcollate2: reads BAM and writes BAM reordered such that alignment
or collated by query name
bammarkduplicates: reads BAM and writes BAM with duplicate alignments
marked using the BAM flags field
bammaskflags: reads BAM and writes BAM while masking (removing) bits
from the flags column
bamrecompress: reads BAM and writes BAM with a defined compression
setting. This tool is capable of multi-threading.
bamsort: reads BAM and writes BAM resorted by coordinates or
query name
bamtofastq: reads BAM and writes FastQ; output can be collated
or uncollated by query name
- biobambam2-dbgsym: debug symbols for biobambam2
