bbmap 38.73+dfsg-1 source package in Ubuntu
Changelog
bbmap (38.73+dfsg-1) unstable; urgency=medium
* Files-Excluded: *.o *.dylib
(Thanks to Adrian Bunk for spotting this)
Closes: #945311
* New upstream version
* Standards-Version: 4.4.1
* Use secure URI in debian/watch.
-- Andreas Tille <email address hidden> Fri, 22 Nov 2019 21:31:47 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section |
|---|
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| bbmap_38.73+dfsg-1.dsc | 2.0 KiB | 0eca8b86f42c60be46a7ce838374578a4322b853e3f9519740fc7420af290e84 |
| bbmap_38.73+dfsg.orig.tar.xz | 7.6 MiB | 3028990949e7e0a16ec5725eb253dc9e27d8ef0629dd8d17c291e3031f4673a5 |
| bbmap_38.73+dfsg-1.debian.tar.xz | 22.0 KiB | 10bfd777b70945f93e7363f71b5e4f96f10b0eafdc11473ae9a20dc14316f625 |
Available diffs
- diff from 38.63+dfsg-1 to 38.73+dfsg-1 (11.0 MiB)
No changes file available.
Binary packages built by this source
- bbmap: short read aligner and other bioinformatic tools
BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling
arbitrarily large genomes with millions of scaffolds. Handles Illumina,
PacBio, 454, and other reads; very high sensitivity and tolerant of
errors and numerous large indels.
.
BBMap is multithreaded as well as the other tools bundled into this
package for instance:
.
BBNorm: Kmer-based error-correction and normalization tool.
.
Dedupe: Simplifies assemblies by removing duplicate or contained
subsequences that share a target percent identity.
.
Reformat: Reformats reads between fasta/fastq/scarf/fasta+ qual/sam,
interleaved/paired, and ASCII-33/64, at over 500 MB/s.
.
BBDuk: Filters, trims, or masks reads with kmer matches to an
artifact/contaminant file.
- bbmap-jni: short read aligner and other bioinformatic tools - JNI library
BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling
arbitrarily large genomes with millions of scaffolds. Handles Illumina,
PacBio, 454, and other reads; very high sensitivity and tolerant of
errors and numerous large indels.
.
This package contains the architecture dependent library for the bbmap
tools.
- bbmap-jni-dbgsym: debug symbols for bbmap-jni
