Ubuntu
barrnap package

barrnap 0.9+dfsg-4 source package in Ubuntu

Changelog

barrnap (0.9+dfsg-4) unstable; urgency=medium

  * Team upload.
  * d/patches/use_both_hmmsets: not needed since before 0.7+dfsg-1
  * d/tests/control: hmmer is now available on arm64/armhf; test there
    as well.
  * d/patches/update_dbs: refresh the databases using the latest SILVA
    database which is DFSG compliant (CC-BY-4.0).
  * d/copyright: document the provenance and licensing for
    d/patches/update_dbs; update homepage URL
  * d/patches/use_debian_dirs: document author, no need to forward upstream

 -- Michael R. Crusoe <email address hidden>  Sat, 16 Sep 2023 16:36:40 +0200

Upload details

Uploaded by:
Debian Med
Uploaded to:
Sid
Original maintainer:
Debian Med
Architectures:
all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Oracular release universe misc
Noble release universe misc

Builds

Noble: [FULLYBUILT] amd64

Downloads

File Size SHA-256 Checksum
barrnap_0.9+dfsg-4.dsc 2.0 KiB 922fc169ff9df1f7bbb1b6e91612b2e6507af8b992a010f4a2e98d509b20beac
barrnap_0.9+dfsg.orig.tar.xz 5.5 MiB b780182b0154cf44915279bb57c1207b9b0aeb24e779fcd6de1a2b6779e89cc8
barrnap_0.9+dfsg-4.debian.tar.xz 686.3 KiB a6d6b925c2a6667433cc70b76e59e257b7d2792bbff541b68f03c57ae1f715d4

Available diffs

No changes file available.

Binary packages built by this source

barrnap: rapid ribosomal RNA prediction

 Barrnap (BAsic Rapid Ribosomal RNA Predictor) predicts the location of
 ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea
 (5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S).
 .
 It takes FASTA DNA sequence as input, and writes GFF3 as output. It uses the
 NHMMER tool that comes with HMMER 3.1 for HMM searching in RNA:DNA style.
 Multithreading is supported and one can expect roughly linear speed-ups
 with more CPUs.