barrnap 0.9+dfsg-3 source package in Ubuntu
Changelog
barrnap (0.9+dfsg-3) unstable; urgency=medium
* Team upload.
* Restrict test architectures to those where hmmer is available
since the package Depends: hmmer
* debhelper-compat 13 (routine-update)
* Drop useless get-orig-source target (routine-update)
* Do not parse d/changelog (routine-update)
* Add salsa-ci file (routine-update)
* Rules-Requires-Root: no (routine-update)
* Set upstream metadata fields: Repository, Repository-Browse.
* Deactivate complex and error-prone dh_auto_clean override
* Remove invalid lintian-override
* Standards-Version: 4.6.2 (routine-update)
* Update renamed lintian tag names in lintian overrides.
* watch file standard 4 (routine-update)
-- Andreas Tille <email address hidden> Thu, 19 Jan 2023 14:27:50 +0100
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
| Series | Published | Component | Section | |
|---|---|---|---|---|
| Mantic | release | universe | misc | |
| Lunar | release | universe | misc |
Downloads
| File | Size | SHA-256 Checksum |
|---|---|---|
| barrnap_0.9+dfsg-3.dsc | 2.0 KiB | 0c8f0655e755d462cef51ab07fa54c09b045f37f5e2898adebc69deddf49fff3 |
| barrnap_0.9+dfsg.orig.tar.xz | 5.5 MiB | b780182b0154cf44915279bb57c1207b9b0aeb24e779fcd6de1a2b6779e89cc8 |
| barrnap_0.9+dfsg-3.debian.tar.xz | 5.8 KiB | 6cf24c76178f29c538054c06fe517d1a5ff99865fded19c7eb5117f64dcd6848 |
Available diffs
- diff from 0.9+dfsg-2 to 0.9+dfsg-3 (2.1 KiB)
No changes file available.
Binary packages built by this source
- barrnap: rapid ribosomal RNA prediction
Barrnap (BAsic Rapid Ribosomal RNA Predictor) predicts the location of
ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea
(5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S).
.
It takes FASTA DNA sequence as input, and writes GFF3 as output. It uses the
NHMMER tool that comes with HMMER 3.1 for HMM searching in RNA:DNA style.
Multithreading is supported and one can expect roughly linear speed-ups
with more CPUs.
