bamtools 2.4.1+dfsg-2 source package in Ubuntu
Changelog
bamtools (2.4.1+dfsg-2) unstable; urgency=medium * Team upload. [ Nadiya Sitdykova ] * add autopkgtest test-suite [ Afif Elghraoui ] * remove unused lintian overrides [ Steffen Moeller ] * debian/upstream/metadata: Added refs to bio.tools and OMICtools * debian/copyright: Corrected case of upstream name * debian/control: Updated policy compliance to 4.0.1 -- Nadiya Sitdykova <email address hidden> Mon, 07 Aug 2017 17:01:19 -0400
Upload details
- Uploaded by:
- Debian Med
- Uploaded to:
- Sid
- Original maintainer:
- Debian Med
- Architectures:
- any all
- Section:
- misc
- Urgency:
- Medium Urgency
See full publishing history Publishing
Series | Published | Component | Section | |
---|---|---|---|---|
Bionic | release | universe | misc |
Downloads
File | Size | SHA-256 Checksum |
---|---|---|
bamtools_2.4.1+dfsg-2.dsc | 2.4 KiB | 68c9e96550c1307a22c5b50c89110ec2b05d4f37405af24459cfda238e9cf336 |
bamtools_2.4.1+dfsg.orig.tar.gz | 197.4 KiB | 4163623ec7f841b16c80bd46e5d3420852b879bc255a034f4e479db2d27dfa07 |
bamtools_2.4.1+dfsg-2.debian.tar.xz | 11.5 KiB | 969a196e95eb3b1bef7af771a3341d2f66e1f76ef6c544bf56ee3a40e7703510 |
Available diffs
- diff from 2.4.1+dfsg-1 to 2.4.1+dfsg-2 (1.8 KiB)
No changes file available.
Binary packages built by this source
- bamtools: toolkit for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the bamtools command-line toolkit.
.
Available bamtools commands:
convert Converts between BAM and a number of other formats
count Prints number of alignments in BAM file(s)
coverage Prints coverage statistics from the input BAM file
filter Filters BAM file(s) by user-specified criteria
header Prints BAM header information
index Generates index for BAM file
merge Merge multiple BAM files into single file
random Select random alignments from existing BAM file(s), intended more
as a testing tool.
resolve Resolves paired-end reads (marking the IsProperPair flag as needed)
revert Removes duplicate marks and restores original base qualities
sort Sorts the BAM file according to some criteria
split Splits a BAM file on user-specified property, creating a new BAM
output file for each value found
stats Prints some basic statistics from input BAM file(s)
- bamtools-dbgsym: No summary available for bamtools-dbgsym in ubuntu cosmic.
No description available for bamtools-dbgsym in ubuntu cosmic.
- libbamtools-dev: No summary available for libbamtools-dev in ubuntu artful.
No description available for libbamtools-dev in ubuntu artful.
- libbamtools-doc: docs for dynamic library for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the documentation for the library.
- libbamtools2.4.0: dynamic library for manipulating BAM (genome alignment) files
BamTools facilitates research analysis and data management using BAM
files. It copes with the enormous amount of data produced by current
sequencing technologies that is typically stored in compressed, binary
formats that are not easily handled by the text-based parsers commonly
used in bioinformatics research.
.
BamTools provides both a C++ API for BAM file support as well as a
command-line toolkit.
.
This is the runtime library.
- libbamtools2.4.0-dbgsym: No summary available for libbamtools2.4.0-dbgsym in ubuntu cosmic.
No description available for libbamtools2.
4.0-dbgsym in ubuntu cosmic.