can't open autodock tools TclError

Bug #1386163 reported by maliqibrohaem on 2014-10-27
This bug report is a duplicate of:  Bug #1492762: TCL error in autodock. Edit Remove
24
This bug affects 4 people
Affects Status Importance Assigned to Milestone
autodocktools (Ubuntu)
Undecided
Unassigned

Bug Description

Run ADT from /usr/lib/python2.7/dist-packages/AutoDockTools
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/AutoDockTools/__init__.py", line 433, in runADT
    title=title, withShell= not interactive, verbose=False, gui=gui)
  File "/usr/lib/python2.7/dist-packages/Pmv/moleculeViewer.py", line 1026, in __init__
    trapExceptions=trapExceptions)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VF.py", line 387, in __init__
    verbose=verbose)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VFGUI.py", line 444, in __init__
    verbose=verbose,guiMaster=VIEWER_root,)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 586, in __init__
    cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 285, in AddCamera
    c = classCamera(master, screenName, self, num, cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2189, in __init__
    self.AddTrackball()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2583, in AddTrackball
    self.trackball = Trackball(self, size, rscale, tscale, sscale, renorm )
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 88, in __init__
    self.createSpinGui()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 726, in createSpinGui
    callback=self.setWithSpinGui,
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 90, in __init__
    self.createEntries(self.frame)
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 360, in createEntries
    self.f.grid(column=3, rowspan=3)
  File "/usr/lib/python2.7/lib-tk/Tkinter.py", line 2022, in grid_configure
    + self._options(cnf, kw))
TclError: cannot use geometry manager grid inside .140622234199824.140622234200328.140622144225432.140622144227664 which already has slaves managed by pack
hit enter to continue

pliss help

Launchpad Janitor (janitor) wrote :

Status changed to 'Confirmed' because the bug affects multiple users.

Changed in autodocktools (Ubuntu):
status: New → Confirmed
Nima (nima-slt) wrote :

i also tried reinstalling MGLtools as described here : http://mgldev.scripps.edu/pipermail/autodock/2014-May/009390.html
but it didnt not help

Akanksha Sharma (akanksha-rph) wrote :

Yes, Same problem appearing in 15.04 vivid version of Ubuntu. please resolve it.
 here goes the resulting commands in my PC too...

akanksha@akanksha-Inspiron-3542:~$ autodocktools
Run ADT from /usr/lib/python2.7/dist-packages/AutoDockTools
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/AutoDockTools/__init__.py", line 433, in runADT
    title=title, withShell= not interactive, verbose=False, gui=gui)
  File "/usr/lib/python2.7/dist-packages/Pmv/moleculeViewer.py", line 1026, in __init__
    trapExceptions=trapExceptions)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VF.py", line 387, in __init__
    verbose=verbose)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VFGUI.py", line 444, in __init__
    verbose=verbose,guiMaster=VIEWER_root,)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 586, in __init__
    cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 285, in AddCamera
    c = classCamera(master, screenName, self, num, cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2189, in __init__
    self.AddTrackball()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2583, in AddTrackball
    self.trackball = Trackball(self, size, rscale, tscale, sscale, renorm )
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 88, in __init__
    self.createSpinGui()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 726, in createSpinGui
    callback=self.setWithSpinGui,
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 90, in __init__
    self.createEntries(self.frame)
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 360, in createEntries
    self.f.grid(column=3, rowspan=3)
  File "/usr/lib/python2.7/lib-tk/Tkinter.py", line 2022, in grid_configure
    + self._options(cnf, kw))
TclError: cannot use geometry manager grid inside .139981473252920.139981473253424.139981414334336.139981414410360 which already has slaves managed by pack
hit enter to continue

Piraeus (piraeus) wrote :

Same here.
Thanks!

Run ADT from /usr/lib/python2.7/dist-packages/AutoDockTools
Traceback (most recent call last):
  File "/usr/lib/python2.7/dist-packages/AutoDockTools/__init__.py", line 433, in runADT
    title=title, withShell= not interactive, verbose=False, gui=gui)
  File "/usr/lib/python2.7/dist-packages/Pmv/moleculeViewer.py", line 1026, in __init__
    trapExceptions=trapExceptions)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VF.py", line 387, in __init__
    verbose=verbose)
  File "/usr/lib/python2.7/dist-packages/ViewerFramework/VFGUI.py", line 444, in __init__
    verbose=verbose,guiMaster=VIEWER_root,)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 586, in __init__
    cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Viewer.py", line 285, in AddCamera
    c = classCamera(master, screenName, self, num, cnf=cnf, **kw)
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2189, in __init__
    self.AddTrackball()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Camera.py", line 2583, in AddTrackball
    self.trackball = Trackball(self, size, rscale, tscale, sscale, renorm )
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 88, in __init__
    self.createSpinGui()
  File "/usr/lib/python2.7/dist-packages/DejaVu/Trackball.py", line 726, in createSpinGui
    callback=self.setWithSpinGui,
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 90, in __init__
    self.createEntries(self.frame)
  File "/usr/lib/python2.7/dist-packages/mglutil/gui/BasicWidgets/Tk/vector3DGUI.py", line 360, in createEntries
    self.f.grid(column=3, rowspan=3)
  File "/usr/lib/python2.7/lib-tk/Tkinter.py", line 2026, in grid_configure
    + self._options(cnf, kw))
TclError: cannot use geometry manager grid inside .139956946632216.139956946681936.139956890253216.139956890296472 which already has slaves managed by pack
hit enter to continue^C
Traceback (most recent call last):
  File "/usr/bin/autodocktools", line 17, in <module>
    AutoDockTools.runADT(sys.argv, ownInterpreter=ownInterpreter, AdtScriptPath=__file__)
  File "/usr/lib/python2.7/dist-packages/AutoDockTools/__init__.py", line 574, in runADT
    raw_input("hit enter to continue")
KeyboardInterrupt

suhadjihad (suhadja2) wrote :

I have the same problem when I try to run Adt on ubuntu 14.04
TclError: cannot use geometry manager grid inside .139653520152624.139653520153128.139653450154424.139653450156656 which already has slaves managed by pack
hit enter to continue

suhadjihad (suhadja2) wrote :

I can solve it as follows :
1) go to http://mgltools.scripps.edu/downloads and click on mgltools_Linux-x86_64_1.5.6_Install this will download mgltools_Linux-x86_64_1.5.6_Install and the later goes on download folder.

2)To grant execute permission, type the following command at a command prompt:
chmod +x MGLTools-$Version-Linux-x86-Install

but change it depend on your download folder in my case:

          chmod +x /home/suhad/Downloads/mgltools_Linux-x86_64_1.5.6_Install

3)Type sudo /home/suhad/Downloads/mgltools_Linux-x86_64_1.5.6_Install press enter
           the wizard for installation begin follow the wizard instruction and choose the destination
            location where you want to install mgltools after finishing the wizard go to the
           destination location and launch the mgltools_Linux-x86_64_1.5.6 icon the autodock tools
           will start.

To post a comment you must log in.
This report contains Public information  Edit
Everyone can see this information.

Other bug subscribers