Ubuntu
augustus package

augustus 3.4.0+dfsg2-3build1 source package in Ubuntu

Changelog

augustus (3.4.0+dfsg2-3build1) jammy; urgency=medium

  * No-change rebuild against libgsl27

 -- Steve Langasek <email address hidden>  Tue, 07 Dec 2021 17:24:14 +0000

Upload details

Uploaded by:
Steve Langasek
Uploaded to:
Jammy
Original maintainer:
Ubuntu Developers
Architectures:
any all
Section:
misc
Urgency:
Medium Urgency

See full publishing history Publishing

Series Pocket Published Component Section
Jammy release universe misc

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File Size SHA-256 Checksum
augustus_3.4.0+dfsg2.orig.tar.xz 141.1 MiB 37c8a523ed948d63291de219205c8e7ac260e27a121b68a64010f38146cf11fe
augustus_3.4.0+dfsg2-3build1.debian.tar.xz 18.8 KiB 881f541ac520f70b3bae44c6c72833025d729daa718ad2e105ccc595398af774
augustus_3.4.0+dfsg2-3build1.dsc 2.4 KiB 27e8395684c556b0ffcd6f2f3862bd8eb697189e16053fccfd66ab87c699943d

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Binary packages built by this source

augustus: gene prediction in eukaryotic genomes

 AUGUSTUS is a software for gene prediction in eukaryotic genomic sequences
 that is based on a generalized hidden Markov model (HMM), a probabilistic
 model of a sequence and its gene structure. After learning gene structures
 from a reference annotation, AUGUSTUS uses the HMM to recognize genes in a new
 sequence and annotates it with the regions of identified genes. External hints,
 e.g. from RNA sequencing, EST or protein alignments etc. can be used to guide
 and improve the gene finding process. The result is the set of most likely gene
 structures that comply with all given user constraints, if such gene
 structures exist.
 AUGUSTUS already includes prebuilt HMMs for many species, as well as scripts
 to train custom models using annotated genomes.

augustus-data: data files for AUGUSTUS

 This package contains pre-trained species models and other required
 architecture-independent data files for the AUGUSTUS gene finder. These are
 needed to identify gene structures in these or related organisms.

augustus-dbgsym: No summary available for augustus-dbgsym in ubuntu kinetic.

No description available for augustus-dbgsym in ubuntu kinetic.

augustus-doc: documentation files for AUGUSTUS

 This package contains documentation for AUGUSTUS: a comprehensive manual-style
 README both for AUGUSTUS in general as well as for its comparative gene
 prediction (cgp) mode, as well as a HTML tutorial.