Atlas alternatives links not updated when upgrading to Meerkat

Bug #670163 reported by Allen.McIntosh on 2010-11-02
12
This bug affects 2 people
Affects Status Importance Assigned to Milestone
atlas (Ubuntu)
Undecided
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Bug Description

Binary package hint: libatlas3gf-sse2

When upgrading from Lemur to Meerkat, the /etc/alternatives links for the SSE2 Atlas libraries were not updated. (The libraries were moved by the upgrade.) The problem showed up as missing libraries when I tried to link against them. Both the BLAS and LAPACK libraries were affected. Fixing the alternatives by hand cured the problem.

[Note: This bug report was not filed from the upgraded machine. Sorry, can't file from there directly.]

For whatever else it's worth, the new libraries appear to work. Could someone please do whatever it takes to fix the 10.04 libraries?

ProblemType: Bug
DistroRelease: Ubuntu 10.04
Package: libatlas3gf-sse2 3.6.0-24ubuntu1
ProcVersionSignature: Ubuntu 2.6.32-25.45-generic 2.6.32.21+drm33.7
Uname: Linux 2.6.32-25-generic i686
Architecture: i386
Date: Tue Nov 2 18:32:11 2010
InstallationMedia: Ubuntu 9.10 "Karmic Koala" - Release i386 (20091028.2)
ProcEnviron:
 LANG=en_US.utf8
 SHELL=/bin/bash
SourcePackage: atlas

Allen.McIntosh (mcintosh) wrote :

quick manual fix:

ln -sf /usr/lib/atlas-base/atlas/libblas.a /etc/alternatives/libblas-3.a
ln -sf /usr/lib/atlas-base/atlas/libblas.so /etc/alternatives/libblas-3.so
ln -sf /usr/lib/atlas-base/atlas/liblapack.a liblapack-3.a
ln -sf /usr/lib/atlas-base/atlas/liblapack.so /etc/alternatives/liblapack-3.so

actually, there's also some more missing links in /usr/lib to libatlas.a

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