Ubuntu
allelecount package

allelecount 4.3.0-2build1 source package in Ubuntu

Changelog

allelecount (4.3.0-2build1) noble; urgency=high

  * No change rebuild against libhts3t64.

 -- Julian Andres Klode <email address hidden>  Fri, 22 Mar 2024 16:27:45 +0100

Upload details

Uploaded by:
Julian Andres Klode
Uploaded to:
Noble
Original maintainer:
Ubuntu Developers
Architectures:
any all
Section:
misc
Urgency:
Very Urgent

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Series Pocket Published Component Section

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File Size SHA-256 Checksum
allelecount_4.3.0.orig.tar.gz 1.3 MiB 5363ae12c2385c962728336a4498b1a29c9eaa3d4a24492d0debf897771cfd3c
allelecount_4.3.0-2build1.debian.tar.xz 15.1 KiB 92cad217126ab19a1584cafae7fc7dd7dcebaafb6730afd9267377edc9147ecb
allelecount_4.3.0-2build1.dsc 2.5 KiB d77ee794060d6e7d613f22434b9dd02b53a7aa19eb6991cf4216b3a479cd00db

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Binary packages built by this source

allelecount: NGS copy number algorithms

 Support code for NGS copy number algorithms. Takes a file of locations
 and a [cr|b]am file and generates a count of coverage of each allele
 [ACGT] at that location (given any filter settings).
 .
 The alleleCount package primarily exists to prevent code duplication
 between some other projects, specifically AscatNGS and Battenberg.

allelecount-dbgsym: debug symbols for allelecount
liballelecount-perl: Perl interface to NGS copy number algorithms

 Support code for NGS copy number algorithms. Takes a file of locations
 and a [cr|b]am file and generates a count of coverage of each allele
 [ACGT] at that location (given any filter settings).
 .
 The alleleCount package primarily exists to prevent code duplication
 between some other projects, specifically AscatNGS and Battenberg.
 .
 This package provided the Perl interface to alleleCounter providing
 Sanger::CGP::AlleleCount::Genotype.