https://launchpad.net/ubuntu/+archive/test-rebuild-20221116-xenial/+build/24715221 RUN: /usr/share/launchpad-buildd/bin/builder-prep Kernel version: Linux bos02-s390x-013 5.4.0-132-generic #148-Ubuntu SMP Mon Oct 17 16:01:44 UTC 2022 s390x Buildd toolchain package versions: launchpad-buildd_223~593~ubuntu20.04.1 python3-lpbuildd_223~593~ubuntu20.04.1 sbuild_0.79.0-1ubuntu1 git-build-recipe_0.3.6 git_1:2.25.1-1ubuntu3.6 dpkg-dev_1.19.7ubuntu3.2 python3-debian_0.1.36ubuntu1. Syncing the system clock with the buildd NTP service... 25 Nov 21:26:15 ntpdate[1798]: adjust time server 10.211.37.1 offset 0.004368 sec RUN: /usr/share/launchpad-buildd/bin/in-target unpack-chroot --backend=chroot --series=xenial --arch=s390x PACKAGEBUILD-24715221 --image-type chroot /home/buildd/filecache-default/ba1d33e7a4f056f0cb3bcda92de266d404108bcd Creating target for build PACKAGEBUILD-24715221 RUN: /usr/share/launchpad-buildd/bin/in-target mount-chroot --backend=chroot --series=xenial --arch=s390x PACKAGEBUILD-24715221 Starting target for build PACKAGEBUILD-24715221 RUN: /usr/share/launchpad-buildd/bin/in-target override-sources-list --backend=chroot --series=xenial --arch=s390x PACKAGEBUILD-24715221 'deb http://ftpmaster.internal/ubuntu xenial main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu xenial-security main restricted universe multiverse' 'deb http://ftpmaster.internal/ubuntu xenial-updates main restricted universe multiverse' Overriding sources.list in build-PACKAGEBUILD-24715221 RUN: /usr/share/launchpad-buildd/bin/in-target update-debian-chroot --backend=chroot --series=xenial --arch=s390x PACKAGEBUILD-24715221 Updating target for build PACKAGEBUILD-24715221 Hit:1 http://ftpmaster.internal/ubuntu xenial InRelease Get:2 http://ftpmaster.internal/ubuntu xenial-security InRelease [99.8 kB] Get:3 http://ftpmaster.internal/ubuntu xenial-updates InRelease [99.8 kB] Get:4 http://ftpmaster.internal/ubuntu xenial-security/main s390x Packages [892 kB] Get:5 http://ftpmaster.internal/ubuntu xenial-security/main Translation-en [360 kB] Get:6 http://ftpmaster.internal/ubuntu xenial-security/restricted s390x Packages [64 B] Get:7 http://ftpmaster.internal/ubuntu xenial-security/restricted Translation-en [2152 B] Get:8 http://ftpmaster.internal/ubuntu xenial-security/universe s390x Packages [601 kB] Get:9 http://ftpmaster.internal/ubuntu xenial-security/universe Translation-en [225 kB] Get:10 http://ftpmaster.internal/ubuntu xenial-security/multiverse s390x Packages [2864 B] Get:11 http://ftpmaster.internal/ubuntu xenial-security/multiverse Translation-en [2672 B] Get:12 http://ftpmaster.internal/ubuntu xenial-updates/main s390x Packages [1190 kB] Get:13 http://ftpmaster.internal/ubuntu xenial-updates/main Translation-en [461 kB] Get:14 http://ftpmaster.internal/ubuntu xenial-updates/restricted s390x Packages [64 B] Get:15 http://ftpmaster.internal/ubuntu xenial-updates/restricted Translation-en [2272 B] Get:16 http://ftpmaster.internal/ubuntu xenial-updates/universe s390x Packages [981 kB] Get:17 http://ftpmaster.internal/ubuntu xenial-updates/universe Translation-en [358 kB] Get:18 http://ftpmaster.internal/ubuntu xenial-updates/multiverse s390x Packages [15.1 kB] Get:19 http://ftpmaster.internal/ubuntu xenial-updates/multiverse Translation-en [8476 B] Fetched 5302 kB in 4s (1201 kB/s) Reading package lists... Reading package lists... Building dependency tree... Reading state information... Calculating upgrade... The following NEW packages will be installed: libzstd1 The following packages will be upgraded: advancecomp apt apt-transport-https base-files bash binutils bsdutils bzip2 ca-certificates coreutils cpp-5 debconf dpkg dpkg-dev e2fslibs e2fsprogs g++-5 gcc-5 gcc-5-base gnupg gpgv grep init init-system-helpers libapparmor1 libapt-pkg5.0 libasn1-8-heimdal libatomic1 libaudit-common libaudit1 libblkid1 libbz2-1.0 libc-bin libc-dev-bin libc6 libc6-dev libcc1-0 libcomerr2 libcryptsetup4 libcurl3-gnutls libdb5.3 libdpkg-perl libfdisk1 libgcc-5-dev libgcrypt20 libgnutls30 libgomp1 libgssapi-krb5-2 libgssapi3-heimdal libhcrypto4-heimdal libheimbase1-heimdal libheimntlm0-heimdal libhogweed4 libhx509-5-heimdal libidn11 libitm1 libk5crypto3 libkmod2 libkrb5-26-heimdal libkrb5-3 libkrb5support0 libldap-2.4-2 libmount1 libnettle6 libp11-kit0 libpam-modules libpam-modules-bin libpam-runtime libpam0g libperl5.22 libpng12-0 libprocps4 libroken18-heimdal librtmp1 libsasl2-2 libsasl2-modules-db libseccomp2 libsmartcols1 libsqlite3-0 libss2 libssl1.0.0 libstdc++-5-dev libstdc++6 libsystemd0 libtasn1-6 libudev1 libuuid1 libwind0-heimdal linux-libc-dev login lsb-base makedev mount multiarch-support openssl optipng passwd patch perl perl-base perl-modules-5.22 procps sensible-utils systemd systemd-sysv tar tzdata ubuntu-keyring util-linux zlib1g 110 upgraded, 1 newly installed, 0 to remove and 0 not upgraded. Need to get 57.9 MB of archives. After this operation, 1122 kB of additional disk space will be used. Get:1 http://ftpmaster.internal/ubuntu xenial-updates/main s390x base-files s390x 9.4ubuntu4.13 [72.7 kB] Get:2 http://ftpmaster.internal/ubuntu xenial-security/main s390x bash s390x 4.3-14ubuntu1.4 [574 kB] Get:3 http://ftpmaster.internal/ubuntu xenial-updates/main s390x bsdutils s390x 1:2.27.1-6ubuntu3.10 [50.2 kB] Get:4 http://ftpmaster.internal/ubuntu xenial-updates/main s390x coreutils s390x 8.25-2ubuntu3~16.04 [1189 kB] Get:5 http://ftpmaster.internal/ubuntu xenial-security/main s390x libc6-dev s390x 2.23-0ubuntu11.3 [1845 kB] Get:6 http://ftpmaster.internal/ubuntu xenial-security/main s390x libc-dev-bin s390x 2.23-0ubuntu11.3 [62.8 kB] Get:7 http://ftpmaster.internal/ubuntu xenial-security/main s390x linux-libc-dev s390x 4.4.0-210.242 [826 kB] Get:8 http://ftpmaster.internal/ubuntu xenial-security/main s390x libc6 s390x 2.23-0ubuntu11.3 [2302 kB] Get:9 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libzstd1 s390x 1.3.1+dfsg-1~ubuntu0.16.04.1 [148 kB] Get:10 http://ftpmaster.internal/ubuntu xenial-updates/main s390x dpkg s390x 1.18.4ubuntu1.7 [2113 kB] Get:11 http://ftpmaster.internal/ubuntu xenial-security/main s390x e2fslibs s390x 1.42.13-1ubuntu1.2 [189 kB] Get:12 http://ftpmaster.internal/ubuntu xenial-security/main s390x e2fsprogs s390x 1.42.13-1ubuntu1.2 [769 kB] Get:13 http://ftpmaster.internal/ubuntu xenial-updates/main s390x grep s390x 2.25-1~16.04.1 [147 kB] Get:14 http://ftpmaster.internal/ubuntu xenial-security/main s390x libperl5.22 s390x 5.22.1-9ubuntu0.9 [3270 kB] Get:15 http://ftpmaster.internal/ubuntu xenial-security/main s390x perl s390x 5.22.1-9ubuntu0.9 [237 kB] Get:16 http://ftpmaster.internal/ubuntu xenial-security/main s390x perl-base s390x 5.22.1-9ubuntu0.9 [1251 kB] Get:17 http://ftpmaster.internal/ubuntu xenial-security/main s390x perl-modules-5.22 all 5.22.1-9ubuntu0.9 [2634 kB] Get:18 http://ftpmaster.internal/ubuntu xenial-security/main s390x bzip2 s390x 1.0.6-8ubuntu0.2 [33.3 kB] Get:19 http://ftpmaster.internal/ubuntu xenial-security/main s390x libbz2-1.0 s390x 1.0.6-8ubuntu0.2 [32.7 kB] Get:20 http://ftpmaster.internal/ubuntu xenial-security/main s390x libdb5.3 s390x 5.3.28-11ubuntu0.2 [616 kB] Get:21 http://ftpmaster.internal/ubuntu xenial-security/main s390x zlib1g s390x 1:1.2.8.dfsg-2ubuntu4.3 [51.8 kB] Get:22 http://ftpmaster.internal/ubuntu xenial-updates/main s390x init-system-helpers all 1.29ubuntu4 [32.3 kB] Get:23 http://ftpmaster.internal/ubuntu xenial-updates/main s390x init s390x 1.29ubuntu4 [4628 B] Get:24 http://ftpmaster.internal/ubuntu xenial-updates/main s390x login s390x 1:4.2-3.1ubuntu5.4 [302 kB] Get:25 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libsystemd0 s390x 229-4ubuntu21.31 [189 kB] Get:26 http://ftpmaster.internal/ubuntu xenial-updates/main s390x systemd s390x 229-4ubuntu21.31 [3255 kB] Get:27 http://ftpmaster.internal/ubuntu xenial-security/main s390x libapparmor1 s390x 2.10.95-0ubuntu2.11 [29.4 kB] Get:28 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libaudit-common all 1:2.4.5-1ubuntu2.1 [3924 B] Get:29 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libaudit1 s390x 1:2.4.5-1ubuntu2.1 [34.8 kB] Get:30 http://ftpmaster.internal/ubuntu xenial-updates/main s390x debconf all 1.5.58ubuntu2 [136 kB] Get:31 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libpam0g s390x 1.1.8-3.2ubuntu2.3 [53.9 kB] Get:32 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libpam-modules-bin s390x 1.1.8-3.2ubuntu2.3 [35.7 kB] Get:33 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libpam-modules s390x 1.1.8-3.2ubuntu2.3 [234 kB] Get:34 http://ftpmaster.internal/ubuntu xenial-updates/main s390x passwd s390x 1:4.2-3.1ubuntu5.4 [770 kB] Get:35 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libuuid1 s390x 2.27.1-6ubuntu3.10 [14.5 kB] Get:36 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libblkid1 s390x 2.27.1-6ubuntu3.10 [101 kB] Get:37 http://ftpmaster.internal/ubuntu xenial-security/main s390x libgcrypt20 s390x 1.6.5-2ubuntu0.6 [295 kB] Get:38 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libcryptsetup4 s390x 2:1.6.6-5ubuntu2.1 [67.8 kB] Get:39 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libkmod2 s390x 22-1ubuntu5.2 [36.8 kB] Get:40 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libmount1 s390x 2.27.1-6ubuntu3.10 [108 kB] Get:41 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libseccomp2 s390x 2.5.1-1ubuntu1~16.04.1 [41.9 kB] Get:42 http://ftpmaster.internal/ubuntu xenial-updates/main s390x lsb-base all 9.20160110ubuntu0.2 [13.7 kB] Get:43 http://ftpmaster.internal/ubuntu xenial-updates/main s390x util-linux s390x 2.27.1-6ubuntu3.10 [839 kB] Get:44 http://ftpmaster.internal/ubuntu xenial-updates/main s390x mount s390x 2.27.1-6ubuntu3.10 [119 kB] Get:45 http://ftpmaster.internal/ubuntu xenial-security/main s390x tar s390x 1.28-2.1ubuntu0.2 [209 kB] Get:46 http://ftpmaster.internal/ubuntu xenial-security/main s390x libc-bin s390x 2.23-0ubuntu11.3 [534 kB] Get:47 http://ftpmaster.internal/ubuntu xenial-security/main s390x libgomp1 s390x 5.4.0-6ubuntu1~16.04.12 [53.6 kB] Get:48 http://ftpmaster.internal/ubuntu xenial-security/main s390x libitm1 s390x 5.4.0-6ubuntu1~16.04.12 [26.5 kB] Get:49 http://ftpmaster.internal/ubuntu xenial-security/main s390x libatomic1 s390x 5.4.0-6ubuntu1~16.04.12 [7978 B] Get:50 http://ftpmaster.internal/ubuntu xenial-security/main s390x g++-5 s390x 5.4.0-6ubuntu1~16.04.12 [6684 kB] Get:51 http://ftpmaster.internal/ubuntu xenial-security/main s390x gcc-5 s390x 5.4.0-6ubuntu1~16.04.12 [6946 kB] Get:52 http://ftpmaster.internal/ubuntu xenial-security/main s390x cpp-5 s390x 5.4.0-6ubuntu1~16.04.12 [6085 kB] Get:53 http://ftpmaster.internal/ubuntu xenial-security/main s390x libcc1-0 s390x 5.4.0-6ubuntu1~16.04.12 [38.5 kB] Get:54 http://ftpmaster.internal/ubuntu xenial-security/main s390x binutils s390x 2.26.1-1ubuntu1~16.04.8 [1055 kB] Get:55 http://ftpmaster.internal/ubuntu xenial-security/main s390x libstdc++-5-dev s390x 5.4.0-6ubuntu1~16.04.12 [1379 kB] Get:56 http://ftpmaster.internal/ubuntu xenial-security/main s390x libgcc-5-dev s390x 5.4.0-6ubuntu1~16.04.12 [246 kB] Get:57 http://ftpmaster.internal/ubuntu xenial-security/main s390x gcc-5-base s390x 5.4.0-6ubuntu1~16.04.12 [17.4 kB] Get:58 http://ftpmaster.internal/ubuntu xenial-security/main s390x libstdc++6 s390x 5.4.0-6ubuntu1~16.04.12 [398 kB] Get:59 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libapt-pkg5.0 s390x 1.2.35 [673 kB] Get:60 http://ftpmaster.internal/ubuntu xenial-updates/main s390x ubuntu-keyring all 2012.05.19.1 [18.4 kB] Get:61 http://ftpmaster.internal/ubuntu xenial-security/main s390x gpgv s390x 1.4.20-1ubuntu3.3 [160 kB] Get:62 http://ftpmaster.internal/ubuntu xenial-security/main s390x gnupg s390x 1.4.20-1ubuntu3.3 [607 kB] Get:63 http://ftpmaster.internal/ubuntu xenial-updates/main s390x apt s390x 1.2.35 [1087 kB] Get:64 http://ftpmaster.internal/ubuntu xenial-updates/main s390x systemd-sysv s390x 229-4ubuntu21.31 [12.3 kB] Get:65 http://ftpmaster.internal/ubuntu xenial-security/main s390x libcomerr2 s390x 1.42.13-1ubuntu1.2 [65.8 kB] Get:66 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libfdisk1 s390x 2.27.1-6ubuntu3.10 [129 kB] Get:67 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libpam-runtime all 1.1.8-3.2ubuntu2.3 [37.8 kB] Get:68 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libsmartcols1 s390x 2.27.1-6ubuntu3.10 [59.4 kB] Get:69 http://ftpmaster.internal/ubuntu xenial-security/main s390x libss2 s390x 1.42.13-1ubuntu1.2 [69.9 kB] Get:70 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libudev1 s390x 229-4ubuntu21.31 [51.5 kB] Get:71 http://ftpmaster.internal/ubuntu xenial-security/main s390x multiarch-support s390x 2.23-0ubuntu11.3 [6828 B] Get:72 http://ftpmaster.internal/ubuntu xenial-security/main s390x sensible-utils all 0.0.9ubuntu0.16.04.1 [10.0 kB] Get:73 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libprocps4 s390x 2:3.3.10-4ubuntu2.5 [31.9 kB] Get:74 http://ftpmaster.internal/ubuntu xenial-updates/main s390x makedev all 2.3.1-93ubuntu2~ubuntu16.04.1 [24.4 kB] Get:75 http://ftpmaster.internal/ubuntu xenial-updates/main s390x procps s390x 2:3.3.10-4ubuntu2.5 [222 kB] Get:76 http://ftpmaster.internal/ubuntu xenial-security/main s390x tzdata all 2021a-0ubuntu0.16.04 [167 kB] Get:77 http://ftpmaster.internal/ubuntu xenial-security/main s390x libhogweed4 s390x 3.2-1ubuntu0.16.04.2 [135 kB] Get:78 http://ftpmaster.internal/ubuntu xenial-security/main s390x libnettle6 s390x 3.2-1ubuntu0.16.04.2 [104 kB] Get:79 http://ftpmaster.internal/ubuntu xenial-security/main s390x libidn11 s390x 1.32-3ubuntu1.2 [44.6 kB] Get:80 http://ftpmaster.internal/ubuntu xenial-security/main s390x libp11-kit0 s390x 0.23.2-5~ubuntu16.04.2 [98.2 kB] Get:81 http://ftpmaster.internal/ubuntu xenial-security/main s390x libtasn1-6 s390x 4.7-3ubuntu0.16.04.3 [41.9 kB] Get:82 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libgnutls30 s390x 3.4.10-4ubuntu1.9 [492 kB] Get:83 http://ftpmaster.internal/ubuntu xenial-security/main s390x libpng12-0 s390x 1.2.54-1ubuntu1.1 [113 kB] Get:84 http://ftpmaster.internal/ubuntu xenial-security/main s390x libsqlite3-0 s390x 3.11.0-1ubuntu1.5 [378 kB] Get:85 http://ftpmaster.internal/ubuntu xenial-security/main s390x libssl1.0.0 s390x 1.0.2g-1ubuntu4.20 [783 kB] Get:86 http://ftpmaster.internal/ubuntu xenial-security/main s390x libgssapi-krb5-2 s390x 1.13.2+dfsg-5ubuntu2.2 [110 kB] Get:87 http://ftpmaster.internal/ubuntu xenial-security/main s390x libkrb5-3 s390x 1.13.2+dfsg-5ubuntu2.2 [259 kB] Get:88 http://ftpmaster.internal/ubuntu xenial-security/main s390x libkrb5support0 s390x 1.13.2+dfsg-5ubuntu2.2 [30.6 kB] Get:89 http://ftpmaster.internal/ubuntu xenial-security/main s390x libk5crypto3 s390x 1.13.2+dfsg-5ubuntu2.2 [81.0 kB] Get:90 http://ftpmaster.internal/ubuntu xenial-security/main s390x libroken18-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [39.6 kB] Get:91 http://ftpmaster.internal/ubuntu xenial-security/main s390x libasn1-8-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [147 kB] Get:92 http://ftpmaster.internal/ubuntu xenial-security/main s390x libhcrypto4-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [81.5 kB] Get:93 http://ftpmaster.internal/ubuntu xenial-security/main s390x libheimbase1-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [27.5 kB] Get:94 http://ftpmaster.internal/ubuntu xenial-security/main s390x libwind0-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [48.2 kB] Get:95 http://ftpmaster.internal/ubuntu xenial-security/main s390x libhx509-5-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [99.3 kB] Get:96 http://ftpmaster.internal/ubuntu xenial-security/main s390x libkrb5-26-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [187 kB] Get:97 http://ftpmaster.internal/ubuntu xenial-security/main s390x libheimntlm0-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [14.7 kB] Get:98 http://ftpmaster.internal/ubuntu xenial-security/main s390x libgssapi3-heimdal s390x 1.7~git20150920+dfsg-4ubuntu1.16.04.1 [88.4 kB] Get:99 http://ftpmaster.internal/ubuntu xenial-security/main s390x libsasl2-modules-db s390x 2.1.26.dfsg1-14ubuntu0.2 [14.0 kB] Get:100 http://ftpmaster.internal/ubuntu xenial-security/main s390x libsasl2-2 s390x 2.1.26.dfsg1-14ubuntu0.2 [46.8 kB] Get:101 http://ftpmaster.internal/ubuntu xenial-security/main s390x libldap-2.4-2 s390x 2.4.42+dfsg-2ubuntu3.13 [150 kB] Get:102 http://ftpmaster.internal/ubuntu xenial-security/main s390x librtmp1 s390x 2.4+20151223.gitfa8646d-1ubuntu0.1 [51.9 kB] Get:103 http://ftpmaster.internal/ubuntu xenial-security/main s390x libcurl3-gnutls s390x 7.47.0-1ubuntu2.19 [179 kB] Get:104 http://ftpmaster.internal/ubuntu xenial-updates/main s390x apt-transport-https s390x 1.2.35 [25.4 kB] Get:105 http://ftpmaster.internal/ubuntu xenial-security/main s390x openssl s390x 1.0.2g-1ubuntu4.20 [478 kB] Get:106 http://ftpmaster.internal/ubuntu xenial-security/main s390x ca-certificates all 20210119~16.04.1 [148 kB] Get:107 http://ftpmaster.internal/ubuntu xenial-security/main s390x advancecomp s390x 1.20-1ubuntu0.2 [157 kB] Get:108 http://ftpmaster.internal/ubuntu xenial-updates/main s390x dpkg-dev all 1.18.4ubuntu1.7 [584 kB] Get:109 http://ftpmaster.internal/ubuntu xenial-updates/main s390x libdpkg-perl all 1.18.4ubuntu1.7 [195 kB] Get:110 http://ftpmaster.internal/ubuntu xenial-security/main s390x patch s390x 2.7.5-1ubuntu0.16.04.2 [92.6 kB] Get:111 http://ftpmaster.internal/ubuntu xenial-security/main s390x optipng s390x 0.7.6-1ubuntu0.16.04.1 [82.2 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 57.9 MB in 58s (985 kB/s) (Reading database ... 11892 files and directories currently installed.) Preparing to unpack .../base-files_9.4ubuntu4.13_s390x.deb ... Unpacking base-files (9.4ubuntu4.13) over (9.4ubuntu4) ... Setting up base-files (9.4ubuntu4.13) ... Installing new version of config file /etc/issue ... Installing new version of config file /etc/issue.net ... Installing new version of config file /etc/lsb-release ... Installing new version of config file /etc/update-motd.d/10-help-text ... (Reading database ... 11895 files and directories currently installed.) Preparing to unpack .../bash_4.3-14ubuntu1.4_s390x.deb ... Unpacking bash (4.3-14ubuntu1.4) over (4.3-14ubuntu1) ... Setting up bash (4.3-14ubuntu1.4) ... Installing new version of config file /etc/skel/.profile ... update-alternatives: using /usr/share/man/man7/bash-builtins.7.gz to provide /usr/share/man/man7/builtins.7.gz (builtins.7.gz) in auto mode (Reading database ... 11895 files and directories currently installed.) Preparing to unpack .../bsdutils_1%3a2.27.1-6ubuntu3.10_s390x.deb ... 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Setting up libc6:s390x (2.23-0ubuntu11.3) ... Processing triggers for libc-bin (2.23-0ubuntu3) ... Selecting previously unselected package libzstd1. (Reading database ... 11895 files and directories currently installed.) Preparing to unpack .../libzstd1_1.3.1+dfsg-1~ubuntu0.16.04.1_s390x.deb ... Unpacking libzstd1 (1.3.1+dfsg-1~ubuntu0.16.04.1) ... Processing triggers for libc-bin (2.23-0ubuntu3) ... Setting up libzstd1 (1.3.1+dfsg-1~ubuntu0.16.04.1) ... Processing triggers for libc-bin (2.23-0ubuntu3) ... (Reading database ... 11900 files and directories currently installed.) Preparing to unpack .../dpkg_1.18.4ubuntu1.7_s390x.deb ... Unpacking dpkg (1.18.4ubuntu1.7) over (1.18.4ubuntu1) ... Setting up dpkg (1.18.4ubuntu1.7) ... (Reading database ... 11900 files and directories currently installed.) Preparing to unpack .../e2fslibs_1.42.13-1ubuntu1.2_s390x.deb ... Unpacking e2fslibs:s390x (1.42.13-1ubuntu1.2) over (1.42.13-1ubuntu1) ... 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Setting up libcc1-0:s390x (5.4.0-6ubuntu1~16.04.12) ... Setting up binutils (2.26.1-1ubuntu1~16.04.8) ... Setting up libgcc-5-dev:s390x (5.4.0-6ubuntu1~16.04.12) ... Setting up gcc-5 (5.4.0-6ubuntu1~16.04.12) ... Setting up libstdc++-5-dev:s390x (5.4.0-6ubuntu1~16.04.12) ... Setting up g++-5 (5.4.0-6ubuntu1~16.04.12) ... Setting up libprocps4:s390x (2:3.3.10-4ubuntu2.5) ... Setting up makedev (2.3.1-93ubuntu2~ubuntu16.04.1) ... Setting up procps (2:3.3.10-4ubuntu2.5) ... update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults Setting up tzdata (2021a-0ubuntu0.16.04) ... Current default time zone: 'Etc/UTC' Local time is now: Fri Nov 25 21:27:35 UTC 2022. Universal Time is now: Fri Nov 25 21:27:35 UTC 2022. Run 'dpkg-reconfigure tzdata' if you wish to change it. Setting up libnettle6:s390x (3.2-1ubuntu0.16.04.2) ... Setting up libhogweed4:s390x (3.2-1ubuntu0.16.04.2) ... Setting up libidn11:s390x (1.32-3ubuntu1.2) ... Setting up libp11-kit0:s390x (0.23.2-5~ubuntu16.04.2) ... Setting up libtasn1-6:s390x (4.7-3ubuntu0.16.04.3) ... Setting up libgnutls30:s390x (3.4.10-4ubuntu1.9) ... Setting up libpng12-0:s390x (1.2.54-1ubuntu1.1) ... Setting up libsqlite3-0:s390x (3.11.0-1ubuntu1.5) ... Setting up libssl1.0.0:s390x (1.0.2g-1ubuntu4.20) ... Setting up libkrb5support0:s390x (1.13.2+dfsg-5ubuntu2.2) ... Setting up libk5crypto3:s390x (1.13.2+dfsg-5ubuntu2.2) ... Setting up libkrb5-3:s390x (1.13.2+dfsg-5ubuntu2.2) ... Setting up libgssapi-krb5-2:s390x (1.13.2+dfsg-5ubuntu2.2) ... Setting up libroken18-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libasn1-8-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libhcrypto4-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libheimbase1-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libwind0-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libhx509-5-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libkrb5-26-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libheimntlm0-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libgssapi3-heimdal:s390x (1.7~git20150920+dfsg-4ubuntu1.16.04.1) ... Setting up libsasl2-modules-db:s390x (2.1.26.dfsg1-14ubuntu0.2) ... Setting up libsasl2-2:s390x (2.1.26.dfsg1-14ubuntu0.2) ... Setting up libldap-2.4-2:s390x (2.4.42+dfsg-2ubuntu3.13) ... Setting up librtmp1:s390x (2.4+20151223.gitfa8646d-1ubuntu0.1) ... Setting up libcurl3-gnutls:s390x (7.47.0-1ubuntu2.19) ... Setting up apt-transport-https (1.2.35) ... Setting up openssl (1.0.2g-1ubuntu4.20) ... Setting up ca-certificates (20210119~16.04.1) ... Setting up advancecomp (1.20-1ubuntu0.2) ... Setting up libdpkg-perl (1.18.4ubuntu1.7) ... Setting up patch (2.7.5-1ubuntu0.16.04.2) ... Setting up dpkg-dev (1.18.4ubuntu1.7) ... Setting up optipng (0.7.6-1ubuntu0.16.04.1) ... Processing triggers for libc-bin (2.23-0ubuntu11.3) ... Processing triggers for ca-certificates (20210119~16.04.1) ... Updating certificates in /etc/ssl/certs... 42 added, 86 removed; done. Running hooks in /etc/ca-certificates/update.d... done. RUN: /usr/share/launchpad-buildd/bin/sbuild-package PACKAGEBUILD-24715221 s390x xenial -c chroot:build-PACKAGEBUILD-24715221 --arch=s390x --dist=xenial --nolog loki_2.4.7.4-6.dsc Initiating build PACKAGEBUILD-24715221 with 4 jobs across 4 processor cores. Kernel reported to sbuild: 5.4.0-132-generic #148-Ubuntu SMP Mon Oct 17 16:01:44 UTC 2022 s390x sbuild (Debian sbuild) 0.79.0 (05 February 2020) on bos02-s390x-013.buildd +==============================================================================+ | loki 2.4.7.4-6 (s390x) Fri, 25 Nov 2022 21:27:39 +0000 | +==============================================================================+ Package: loki Version: 2.4.7.4-6 Source Version: 2.4.7.4-6 Distribution: xenial Machine Architecture: s390x Host Architecture: s390x Build Architecture: s390x Build Type: any I: NOTICE: Log filtering will replace 'home/buildd/build-PACKAGEBUILD-24715221/chroot-autobuild' with '<>' I: NOTICE: Log filtering will replace 'build/loki-YPHIMY/resolver-R6RV8w' with '<>' +------------------------------------------------------------------------------+ | Fetch source files | +------------------------------------------------------------------------------+ Local sources ------------- loki_2.4.7.4-6.dsc exists in .; copying to chroot I: NOTICE: Log filtering will replace 'build/loki-YPHIMY/loki-2.4.7.4' with '<>' I: NOTICE: Log filtering will replace 'build/loki-YPHIMY' with '<>' +------------------------------------------------------------------------------+ | Install package build dependencies | +------------------------------------------------------------------------------+ Setup apt archive ----------------- Merged Build-Depends: debhelper (>= 9), build-essential, fakeroot Filtered Build-Depends: debhelper (>= 9), build-essential, fakeroot dpkg-deb: building package 'sbuild-build-depends-main-dummy' in '/<>/apt_archive/sbuild-build-depends-main-dummy.deb'. Ign:1 copy:/<>/apt_archive ./ InRelease Get:2 copy:/<>/apt_archive ./ Release [957 B] Ign:3 copy:/<>/apt_archive ./ Release.gpg Get:4 copy:/<>/apt_archive ./ Sources [366 B] Get:5 copy:/<>/apt_archive ./ Packages [446 B] Fetched 1769 B in 0s (0 B/s) Reading package lists... Reading package lists... Install main build dependencies (apt-based resolver) ---------------------------------------------------- Installing build dependencies Reading package lists... Building dependency tree... Reading state information... The following additional packages will be installed: autotools-dev bsdmainutils debhelper dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasprintf0v5 libcroco3 libfile-stripnondeterminism-perl libglib2.0-0 libicu55 libmagic1 libpipeline1 libtimedate-perl libunistring0 libxml2 man-db po-debconf Suggested packages: wamerican | wordlist whois vacation dh-make gettext-doc autopoint groff less www-browser libmail-box-perl Recommended packages: curl | wget | lynx-cur libasprintf-dev libgettextpo-dev libglib2.0-data shared-mime-info xdg-user-dirs xml-core libmail-sendmail-perl The following NEW packages will be installed: autotools-dev bsdmainutils debhelper dh-strip-nondeterminism file gettext gettext-base groff-base intltool-debian libarchive-zip-perl libasprintf0v5 libcroco3 libfile-stripnondeterminism-perl libglib2.0-0 libicu55 libmagic1 libpipeline1 libtimedate-perl libunistring0 libxml2 man-db po-debconf sbuild-build-depends-main-dummy 0 upgraded, 23 newly installed, 0 to remove and 0 not upgraded. Need to get 14.3 MB of archives. After this operation, 56.9 MB of additional disk space will be used. Get:1 copy:/<>/apt_archive ./ sbuild-build-depends-main-dummy 0.invalid.0 [786 B] Get:2 http://ftpmaster.internal/ubuntu xenial-security/main s390x libglib2.0-0 s390x 2.48.2-0ubuntu4.8 [1047 kB] Get:3 http://ftpmaster.internal/ubuntu xenial/main s390x groff-base s390x 1.22.3-7 [1199 kB] Get:4 http://ftpmaster.internal/ubuntu xenial/main s390x bsdmainutils s390x 9.0.6ubuntu3 [179 kB] Get:5 http://ftpmaster.internal/ubuntu xenial/main s390x libpipeline1 s390x 1.4.1-2 [24.8 kB] Get:6 http://ftpmaster.internal/ubuntu xenial/main s390x man-db s390x 2.7.5-1 [850 kB] Get:7 http://ftpmaster.internal/ubuntu xenial-security/main s390x libmagic1 s390x 1:5.25-2ubuntu1.4 [214 kB] Get:8 http://ftpmaster.internal/ubuntu xenial-security/main s390x file s390x 1:5.25-2ubuntu1.4 [21.6 kB] Get:9 http://ftpmaster.internal/ubuntu xenial-security/main s390x libasprintf0v5 s390x 0.19.7-2ubuntu3.1 [6492 B] Get:10 http://ftpmaster.internal/ubuntu xenial-security/main s390x gettext-base s390x 0.19.7-2ubuntu3.1 [47.8 kB] Get:11 http://ftpmaster.internal/ubuntu xenial-security/main s390x libicu55 s390x 55.1-7ubuntu0.5 [7490 kB] Get:12 http://ftpmaster.internal/ubuntu xenial-security/main s390x libxml2 s390x 2.9.3+dfsg1-1ubuntu0.7 [642 kB] Get:13 http://ftpmaster.internal/ubuntu xenial/main s390x autotools-dev all 20150820.1 [39.8 kB] Get:14 http://ftpmaster.internal/ubuntu xenial/main s390x libcroco3 s390x 0.6.11-1 [76.5 kB] Get:15 http://ftpmaster.internal/ubuntu xenial/main s390x libunistring0 s390x 0.9.3-5.2ubuntu1 [262 kB] Get:16 http://ftpmaster.internal/ubuntu xenial-security/main s390x gettext s390x 0.19.7-2ubuntu3.1 [1054 kB] Get:17 http://ftpmaster.internal/ubuntu xenial/main s390x intltool-debian all 0.35.0+20060710.4 [24.9 kB] Get:18 http://ftpmaster.internal/ubuntu xenial/main s390x po-debconf all 1.0.19 [234 kB] Get:19 http://ftpmaster.internal/ubuntu xenial-security/main s390x libarchive-zip-perl all 1.56-2ubuntu0.1 [84.7 kB] Get:20 http://ftpmaster.internal/ubuntu xenial/main s390x libfile-stripnondeterminism-perl all 0.015-1 [10.3 kB] Get:21 http://ftpmaster.internal/ubuntu xenial/main s390x libtimedate-perl all 2.3000-2 [37.5 kB] Get:22 http://ftpmaster.internal/ubuntu xenial/main s390x dh-strip-nondeterminism all 0.015-1 [4864 B] Get:23 http://ftpmaster.internal/ubuntu xenial/main s390x debhelper all 9.20160115ubuntu3 [739 kB] debconf: delaying package configuration, since apt-utils is not installed Fetched 14.3 MB in 4s (3228 kB/s) Selecting previously unselected package libglib2.0-0:s390x. (Reading database ... 11877 files and directories currently installed.) Preparing to unpack .../libglib2.0-0_2.48.2-0ubuntu4.8_s390x.deb ... Unpacking libglib2.0-0:s390x (2.48.2-0ubuntu4.8) ... Selecting previously unselected package groff-base. Preparing to unpack .../groff-base_1.22.3-7_s390x.deb ... Unpacking groff-base (1.22.3-7) ... Selecting previously unselected package bsdmainutils. Preparing to unpack .../bsdmainutils_9.0.6ubuntu3_s390x.deb ... Unpacking bsdmainutils (9.0.6ubuntu3) ... Selecting previously unselected package libpipeline1:s390x. Preparing to unpack .../libpipeline1_1.4.1-2_s390x.deb ... Unpacking libpipeline1:s390x (1.4.1-2) ... Selecting previously unselected package man-db. Preparing to unpack .../man-db_2.7.5-1_s390x.deb ... Unpacking man-db (2.7.5-1) ... Selecting previously unselected package libmagic1:s390x. Preparing to unpack .../libmagic1_1%3a5.25-2ubuntu1.4_s390x.deb ... Unpacking libmagic1:s390x (1:5.25-2ubuntu1.4) ... Selecting previously unselected package file. Preparing to unpack .../file_1%3a5.25-2ubuntu1.4_s390x.deb ... Unpacking file (1:5.25-2ubuntu1.4) ... Selecting previously unselected package libasprintf0v5:s390x. Preparing to unpack .../libasprintf0v5_0.19.7-2ubuntu3.1_s390x.deb ... Unpacking libasprintf0v5:s390x (0.19.7-2ubuntu3.1) ... Selecting previously unselected package gettext-base. Preparing to unpack .../gettext-base_0.19.7-2ubuntu3.1_s390x.deb ... Unpacking gettext-base (0.19.7-2ubuntu3.1) ... Selecting previously unselected package libicu55:s390x. Preparing to unpack .../libicu55_55.1-7ubuntu0.5_s390x.deb ... Unpacking libicu55:s390x (55.1-7ubuntu0.5) ... Selecting previously unselected package libxml2:s390x. Preparing to unpack .../libxml2_2.9.3+dfsg1-1ubuntu0.7_s390x.deb ... Unpacking libxml2:s390x (2.9.3+dfsg1-1ubuntu0.7) ... Selecting previously unselected package autotools-dev. Preparing to unpack .../autotools-dev_20150820.1_all.deb ... Unpacking autotools-dev (20150820.1) ... Selecting previously unselected package libcroco3:s390x. Preparing to unpack .../libcroco3_0.6.11-1_s390x.deb ... Unpacking libcroco3:s390x (0.6.11-1) ... Selecting previously unselected package libunistring0:s390x. Preparing to unpack .../libunistring0_0.9.3-5.2ubuntu1_s390x.deb ... Unpacking libunistring0:s390x (0.9.3-5.2ubuntu1) ... Selecting previously unselected package gettext. Preparing to unpack .../gettext_0.19.7-2ubuntu3.1_s390x.deb ... Unpacking gettext (0.19.7-2ubuntu3.1) ... Selecting previously unselected package intltool-debian. Preparing to unpack .../intltool-debian_0.35.0+20060710.4_all.deb ... Unpacking intltool-debian (0.35.0+20060710.4) ... Selecting previously unselected package po-debconf. Preparing to unpack .../po-debconf_1.0.19_all.deb ... Unpacking po-debconf (1.0.19) ... Selecting previously unselected package libarchive-zip-perl. Preparing to unpack .../libarchive-zip-perl_1.56-2ubuntu0.1_all.deb ... Unpacking libarchive-zip-perl (1.56-2ubuntu0.1) ... Selecting previously unselected package libfile-stripnondeterminism-perl. Preparing to unpack .../libfile-stripnondeterminism-perl_0.015-1_all.deb ... Unpacking libfile-stripnondeterminism-perl (0.015-1) ... Selecting previously unselected package libtimedate-perl. Preparing to unpack .../libtimedate-perl_2.3000-2_all.deb ... Unpacking libtimedate-perl (2.3000-2) ... Selecting previously unselected package dh-strip-nondeterminism. Preparing to unpack .../dh-strip-nondeterminism_0.015-1_all.deb ... Unpacking dh-strip-nondeterminism (0.015-1) ... Selecting previously unselected package debhelper. Preparing to unpack .../debhelper_9.20160115ubuntu3_all.deb ... Unpacking debhelper (9.20160115ubuntu3) ... Selecting previously unselected package sbuild-build-depends-main-dummy. Preparing to unpack .../sbuild-build-depends-main-dummy_0.invalid.0_s390x.deb ... Unpacking sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.23-0ubuntu11.3) ... Setting up libglib2.0-0:s390x (2.48.2-0ubuntu4.8) ... No schema files found: doing nothing. Setting up groff-base (1.22.3-7) ... Setting up bsdmainutils (9.0.6ubuntu3) ... update-alternatives: using /usr/bin/bsd-write to provide /usr/bin/write (write) in auto mode update-alternatives: using /usr/bin/bsd-from to provide /usr/bin/from (from) in auto mode Setting up libpipeline1:s390x (1.4.1-2) ... Setting up man-db (2.7.5-1) ... Not building database; man-db/auto-update is not 'true'. Setting up libmagic1:s390x (1:5.25-2ubuntu1.4) ... Setting up file (1:5.25-2ubuntu1.4) ... Setting up libasprintf0v5:s390x (0.19.7-2ubuntu3.1) ... Setting up gettext-base (0.19.7-2ubuntu3.1) ... Setting up libicu55:s390x (55.1-7ubuntu0.5) ... Setting up libxml2:s390x (2.9.3+dfsg1-1ubuntu0.7) ... Setting up autotools-dev (20150820.1) ... Setting up libcroco3:s390x (0.6.11-1) ... Setting up libunistring0:s390x (0.9.3-5.2ubuntu1) ... Setting up gettext (0.19.7-2ubuntu3.1) ... Setting up intltool-debian (0.35.0+20060710.4) ... Setting up po-debconf (1.0.19) ... Setting up libarchive-zip-perl (1.56-2ubuntu0.1) ... Setting up libfile-stripnondeterminism-perl (0.015-1) ... Setting up libtimedate-perl (2.3000-2) ... Setting up dh-strip-nondeterminism (0.015-1) ... Setting up debhelper (9.20160115ubuntu3) ... Setting up sbuild-build-depends-main-dummy (0.invalid.0) ... Processing triggers for libc-bin (2.23-0ubuntu11.3) ... +------------------------------------------------------------------------------+ | Check architectures | +------------------------------------------------------------------------------+ Arch check ok (s390x included in any all) +------------------------------------------------------------------------------+ | Build environment | +------------------------------------------------------------------------------+ Kernel: Linux 5.4.0-132-generic #148-Ubuntu SMP Mon Oct 17 16:01:44 UTC 2022 s390x (s390x) Toolchain package versions: binutils_2.26.1-1ubuntu1~16.04.8 dpkg-dev_1.18.4ubuntu1.7 g++-5_5.4.0-6ubuntu1~16.04.12 gcc-5_5.4.0-6ubuntu1~16.04.12 libc6-dev_2.23-0ubuntu11.3 libstdc++-5-dev_5.4.0-6ubuntu1~16.04.12 libstdc++6_5.4.0-6ubuntu1~16.04.12 linux-libc-dev_4.4.0-210.242 Package versions: adduser_3.113+nmu3ubuntu4 advancecomp_1.20-1ubuntu0.2 apt_1.2.35 apt-transport-https_1.2.35 autotools-dev_20150820.1 base-files_9.4ubuntu4.13 base-passwd_3.5.39 bash_4.3-14ubuntu1.4 binutils_2.26.1-1ubuntu1~16.04.8 bsdmainutils_9.0.6ubuntu3 bsdutils_1:2.27.1-6ubuntu3.10 build-essential_12.1ubuntu2 bzip2_1.0.6-8ubuntu0.2 ca-certificates_20210119~16.04.1 coreutils_8.25-2ubuntu3~16.04 cpp_4:5.3.1-1ubuntu1 cpp-5_5.4.0-6ubuntu1~16.04.12 dash_0.5.8-2.1ubuntu2 debconf_1.5.58ubuntu2 debhelper_9.20160115ubuntu3 debianutils_4.7 dh-strip-nondeterminism_0.015-1 diffutils_1:3.3-3 dpkg_1.18.4ubuntu1.7 dpkg-dev_1.18.4ubuntu1.7 e2fslibs_1.42.13-1ubuntu1.2 e2fsprogs_1.42.13-1ubuntu1.2 fakeroot_1.20.2-1ubuntu1 file_1:5.25-2ubuntu1.4 findutils_4.6.0+git+20160126-2 g++_4:5.3.1-1ubuntu1 g++-5_5.4.0-6ubuntu1~16.04.12 gcc_4:5.3.1-1ubuntu1 gcc-5_5.4.0-6ubuntu1~16.04.12 gcc-5-base_5.4.0-6ubuntu1~16.04.12 gcc-6-base_6.0.1-0ubuntu1 gettext_0.19.7-2ubuntu3.1 gettext-base_0.19.7-2ubuntu3.1 gnupg_1.4.20-1ubuntu3.3 gpgv_1.4.20-1ubuntu3.3 grep_2.25-1~16.04.1 groff-base_1.22.3-7 gzip_1.6-4ubuntu1 hostname_3.16ubuntu2 init_1.29ubuntu4 init-system-helpers_1.29ubuntu4 initscripts_2.88dsf-59.3ubuntu2 insserv_1.14.0-5ubuntu3 intltool-debian_0.35.0+20060710.4 libacl1_2.2.52-3 libapparmor1_2.10.95-0ubuntu2.11 libapt-pkg5.0_1.2.35 libarchive-zip-perl_1.56-2ubuntu0.1 libasn1-8-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libasprintf0v5_0.19.7-2ubuntu3.1 libatomic1_5.4.0-6ubuntu1~16.04.12 libattr1_1:2.4.47-2 libaudit-common_1:2.4.5-1ubuntu2.1 libaudit1_1:2.4.5-1ubuntu2.1 libblkid1_2.27.1-6ubuntu3.10 libbz2-1.0_1.0.6-8ubuntu0.2 libc-bin_2.23-0ubuntu11.3 libc-dev-bin_2.23-0ubuntu11.3 libc6_2.23-0ubuntu11.3 libc6-dev_2.23-0ubuntu11.3 libcap2_1:2.24-12 libcap2-bin_1:2.24-12 libcc1-0_5.4.0-6ubuntu1~16.04.12 libcomerr2_1.42.13-1ubuntu1.2 libcroco3_0.6.11-1 libcryptsetup4_2:1.6.6-5ubuntu2.1 libcurl3-gnutls_7.47.0-1ubuntu2.19 libdb5.3_5.3.28-11ubuntu0.2 libdebconfclient0_0.198ubuntu1 libdevmapper1.02.1_2:1.02.110-1ubuntu10 libdpkg-perl_1.18.4ubuntu1.7 libfakeroot_1.20.2-1ubuntu1 libfdisk1_2.27.1-6ubuntu3.10 libffi6_3.2.1-4 libfile-stripnondeterminism-perl_0.015-1 libgcc-5-dev_5.4.0-6ubuntu1~16.04.12 libgcc1_1:6.0.1-0ubuntu1 libgcrypt20_1.6.5-2ubuntu0.6 libgdbm3_1.8.3-13.1 libglib2.0-0_2.48.2-0ubuntu4.8 libgmp10_2:6.1.0+dfsg-2 libgnutls30_3.4.10-4ubuntu1.9 libgomp1_5.4.0-6ubuntu1~16.04.12 libgpg-error0_1.21-2ubuntu1 libgssapi-krb5-2_1.13.2+dfsg-5ubuntu2.2 libgssapi3-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libhcrypto4-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libheimbase1-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libheimntlm0-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libhogweed4_3.2-1ubuntu0.16.04.2 libhx509-5-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libicu55_55.1-7ubuntu0.5 libidn11_1.32-3ubuntu1.2 libisl15_0.16.1-1 libitm1_5.4.0-6ubuntu1~16.04.12 libk5crypto3_1.13.2+dfsg-5ubuntu2.2 libkeyutils1_1.5.9-8ubuntu1 libkmod2_22-1ubuntu5.2 libkrb5-26-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libkrb5-3_1.13.2+dfsg-5ubuntu2.2 libkrb5support0_1.13.2+dfsg-5ubuntu2.2 libldap-2.4-2_2.4.42+dfsg-2ubuntu3.13 liblockfile-bin_1.09-6ubuntu1 liblockfile1_1.09-6ubuntu1 liblz4-1_0.0~r131-2ubuntu2 liblzma5_5.1.1alpha+20120614-2ubuntu2 libmagic1_1:5.25-2ubuntu1.4 libmount1_2.27.1-6ubuntu3.10 libmpc3_1.0.3-1 libmpfr4_3.1.4-1 libncurses5_6.0+20160213-1ubuntu1 libncursesw5_6.0+20160213-1ubuntu1 libnettle6_3.2-1ubuntu0.16.04.2 libp11-kit0_0.23.2-5~ubuntu16.04.2 libpam-modules_1.1.8-3.2ubuntu2.3 libpam-modules-bin_1.1.8-3.2ubuntu2.3 libpam-runtime_1.1.8-3.2ubuntu2.3 libpam0g_1.1.8-3.2ubuntu2.3 libpcre3_2:8.38-3.1 libperl5.22_5.22.1-9ubuntu0.9 libpipeline1_1.4.1-2 libpng12-0_1.2.54-1ubuntu1.1 libprocps4_2:3.3.10-4ubuntu2.5 libreadline6_6.3-8ubuntu2 libroken18-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 librtmp1_2.4+20151223.gitfa8646d-1ubuntu0.1 libsasl2-2_2.1.26.dfsg1-14ubuntu0.2 libsasl2-modules-db_2.1.26.dfsg1-14ubuntu0.2 libseccomp2_2.5.1-1ubuntu1~16.04.1 libselinux1_2.4-3build2 libsemanage-common_2.3-1build3 libsemanage1_2.3-1build3 libsepol1_2.4-2 libsmartcols1_2.27.1-6ubuntu3.10 libsqlite3-0_3.11.0-1ubuntu1.5 libss2_1.42.13-1ubuntu1.2 libssl1.0.0_1.0.2g-1ubuntu4.20 libstdc++-5-dev_5.4.0-6ubuntu1~16.04.12 libstdc++6_5.4.0-6ubuntu1~16.04.12 libsystemd0_229-4ubuntu21.31 libtasn1-6_4.7-3ubuntu0.16.04.3 libtimedate-perl_2.3000-2 libtinfo5_6.0+20160213-1ubuntu1 libudev1_229-4ubuntu21.31 libunistring0_0.9.3-5.2ubuntu1 libusb-0.1-4_2:0.1.12-28 libustr-1.0-1_1.0.4-5 libuuid1_2.27.1-6ubuntu3.10 libwind0-heimdal_1.7~git20150920+dfsg-4ubuntu1.16.04.1 libxml2_2.9.3+dfsg1-1ubuntu0.7 libzstd1_1.3.1+dfsg-1~ubuntu0.16.04.1 linux-libc-dev_4.4.0-210.242 lockfile-progs_0.1.17 login_1:4.2-3.1ubuntu5.4 lsb-base_9.20160110ubuntu0.2 make_4.1-6 makedev_2.3.1-93ubuntu2~ubuntu16.04.1 man-db_2.7.5-1 mawk_1.3.3-17ubuntu2 mount_2.27.1-6ubuntu3.10 multiarch-support_2.23-0ubuntu11.3 ncurses-base_6.0+20160213-1ubuntu1 ncurses-bin_6.0+20160213-1ubuntu1 openssl_1.0.2g-1ubuntu4.20 optipng_0.7.6-1ubuntu0.16.04.1 passwd_1:4.2-3.1ubuntu5.4 patch_2.7.5-1ubuntu0.16.04.2 perl_5.22.1-9ubuntu0.9 perl-base_5.22.1-9ubuntu0.9 perl-modules-5.22_5.22.1-9ubuntu0.9 pkg-create-dbgsym_0.72 pkgbinarymangler_129 po-debconf_1.0.19 policyrcd-script-zg2_0.1-2 procps_2:3.3.10-4ubuntu2.5 readline-common_6.3-8ubuntu2 sbuild-build-depends-main-dummy_0.invalid.0 sed_4.2.2-7 sensible-utils_0.0.9ubuntu0.16.04.1 systemd_229-4ubuntu21.31 systemd-sysv_229-4ubuntu21.31 sysv-rc_2.88dsf-59.3ubuntu2 sysvinit-utils_2.88dsf-59.3ubuntu2 tar_1.28-2.1ubuntu0.2 tzdata_2021a-0ubuntu0.16.04 ubuntu-keyring_2012.05.19.1 util-linux_2.27.1-6ubuntu3.10 xz-utils_5.1.1alpha+20120614-2ubuntu2 zlib1g_1:1.2.8.dfsg-2ubuntu4.3 +------------------------------------------------------------------------------+ | Build | +------------------------------------------------------------------------------+ Unpack source ------------- -----BEGIN PGP SIGNED MESSAGE----- Hash: SHA256 Format: 3.0 (quilt) Source: loki Binary: loki, loki-doc Architecture: any all Version: 2.4.7.4-6 Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Carleos Artime Standards-Version: 3.9.6 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/loki/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/loki/trunk/ Build-Depends: debhelper (>= 9) Package-List: loki deb science optional arch=any loki-doc deb doc optional arch=all Checksums-Sha1: ce7d6ff3ca6159c329ca0f5f6ed633bf265acd33 904260 loki_2.4.7.4.orig.tar.gz b1a8cf2ca5aafae41b0f814121fc5923b08d0374 23268 loki_2.4.7.4-6.debian.tar.xz Checksums-Sha256: 78bc51f47fb756fcdc9ab55bc4c7dd649ee87aaa6bd9be87eac44e4a8eac9eb5 904260 loki_2.4.7.4.orig.tar.gz b38d73825929ab8426f7f8c6733adaa668b0b1eb71a392fc517743db6c56f2cf 23268 loki_2.4.7.4-6.debian.tar.xz Files: 7764c55d3c3a33584a6f92740210b677 904260 loki_2.4.7.4.orig.tar.gz 9c54c0170ae5c638877154c39b0c4a4c 23268 loki_2.4.7.4-6.debian.tar.xz -----BEGIN PGP SIGNATURE----- Version: GnuPG v1 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loki in /<> dpkg-source: info: unpacking loki_2.4.7.4.orig.tar.gz dpkg-source: info: unpacking loki_2.4.7.4-6.debian.tar.xz dpkg-source: info: applying 10_utils.patch dpkg-source: info: applying 10_lex.patch dpkg-source: info: applying hardening.patch Check disk space ---------------- Sufficient free space for build User Environment ---------------- APT_CONFIG=/var/lib/sbuild/apt.conf DEB_BUILD_OPTIONS=noautodbgsym parallel=4 HOME=/sbuild-nonexistent LANG=C.UTF-8 LC_ALL=C.UTF-8 LOGNAME=buildd PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games SCHROOT_ALIAS_NAME=build-PACKAGEBUILD-24715221 SCHROOT_CHROOT_NAME=build-PACKAGEBUILD-24715221 SCHROOT_COMMAND=env SCHROOT_GID=2501 SCHROOT_GROUP=buildd SCHROOT_SESSION_ID=build-PACKAGEBUILD-24715221 SCHROOT_UID=2001 SCHROOT_USER=buildd SHELL=/bin/sh TERM=unknown USER=buildd V=1 dpkg-buildpackage ----------------- Command: dpkg-buildpackage -us -uc -mLaunchpad Build Daemon -B -rfakeroot dpkg-buildpackage: source package loki dpkg-buildpackage: source version 2.4.7.4-6 dpkg-buildpackage: source distribution unstable dpkg-source --before-build loki-2.4.7.4 dpkg-buildpackage: host architecture s390x fakeroot debian/rules clean dh clean dh_testdir dh_auto_clean dh_clean debian/rules build-arch dh build-arch dh_testdir -a dh_update_autotools_config -a debian/rules override_dh_auto_configure-arch make[1]: Entering directory '/<>' dh_auto_configure -- --exec_prefix=/<>/debian/loki/usr ./configure --build=s390x-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/s390x-linux-gnu --libexecdir=\${prefix}/lib/s390x-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --exec_prefix=/<>/debian/loki/usr checking whether make sets $(MAKE)... yes checking for DMALLOC library Looking for dmalloc.h in ${prefix}/include and libdmalloc.a in ${prefix}/lib/s390x-linux-gnu Looking for dmalloc.h in /usr/local/include and libdmalloc.a in /usr/local/lib Looking for dmalloc.h in /usr/include and libdmalloc.a in /usr/lib Looking for dmalloc.h in /sbuild-nonexistent/include and libdmalloc.a in /sbuild-nonexistent/lib checking for gcc... gcc checking for C compiler default output... a.out checking whether the C compiler works... yes checking whether we are cross compiling... no checking for suffix of executables... checking for suffix of object files... o checking whether we are using the GNU C compiler... yes checking whether gcc accepts -g... yes checking for gcc option to accept ANSI C... none needed checking for flex... no checking for lex... no checking for yywrap in -lfl... no checking for yywrap in -ll... no checking for bison... no checking for byacc... no checking for ranlib... /usr/bin/ranlib checking for ar... /usr/bin/ar checking for sed... /bin/sed checking for cp... /bin/cp checking for grep... /bin/grep checking for mv... /bin/mv checking for gzip... /bin/gzip checking for chmod... /bin/chmod checking for perl... /usr/bin/perl checking for makedepend... : checking for sin in -lm... yes checking for accept in -lsocket... no checking how to run the C preprocessor... gcc -E checking for egrep... grep -E checking for ANSI C header files... yes checking for sys/wait.h that is POSIX.1 compatible... yes checking for sys/types.h... yes checking for sys/stat.h... yes checking for stdlib.h... yes checking for string.h... yes checking for memory.h... yes checking for strings.h... yes checking for inttypes.h... yes checking for stdint.h... yes checking for unistd.h... yes checking fcntl.h usability... yes checking fcntl.h presence... yes checking for fcntl.h... yes checking limits.h usability... yes checking limits.h presence... yes checking for limits.h... yes checking values.h usability... yes checking values.h presence... yes checking for values.h... yes checking for unistd.h... (cached) yes checking sys/systeminfo.h usability... no checking sys/systeminfo.h presence... no checking for sys/systeminfo.h... no checking for mode_t... yes checking for off_t... yes checking for pid_t... yes checking for size_t... yes checking for working alloca.h... yes checking for alloca... yes checking for socklen_t... yes checking for an ANSI C-conforming const... yes checking for vprintf... yes checking for _doprnt... no checking for memcpy... yes checking for regcomp... yes checking for strtod... yes checking for strtol... yes checking for gethostname... yes checking for popen... yes checking for snprintf... yes checking for atexit... yes checking for memmove... yes configure: creating ./config.status config.status: creating Makefile config.status: creating libsrc/Makefile config.status: creating prepsrc/Makefile config.status: creating prepsrc/compat/Makefile config.status: creating lokisrc/Makefile config.status: creating test/Makefile config.status: creating utils/Makefile config.status: creating include/config.h make[1]: Leaving directory '/<>' dh_auto_build -a make -j1 make[1]: Entering directory '/<>' for subdir in libsrc prepsrc lokisrc utils; do \ (cd $subdir; make depend) \ done make[2]: Entering directory '/<>/libsrc' : -I../include/ io_stuff.c ranlib.c genrand.c ran_xtra.c mkbackup.c strsep.c utils.c remember.c peel_utils.c qsort.c min_deg.c bin_tree.c getopt_long.c touch depend make[2]: Leaving directory '/<>/libsrc' make[2]: Entering directory '/<>/prepsrc' : -I../include control_parse.c control_lex.c check_het.c test_het.c prep.c calc_nrm.c write_report.c prep_utils.c gen_elim.c prep_do_peel_op.c write_data.c touch depend make[2]: Leaving directory '/<>/prepsrc' make[2]: Entering directory '/<>/lokisrc' : -I../include loki.c loki_peel.c loki_init.c alloc_loki.c loki_sample.c loki_pen.c loki_tlmoves.c meiosis_scan.c loki_identity.c sample_rand.c sample_effects.c loki_setup.c loki_dump.c sample_cens.c handle_res.c print_data.c calc_var_locus.c loki_output.c sample_nu.c loki_complex_peel.c loki_npl.c loki_simple_sample.c loki_simple_peel.c loki_trait_simple_peel.c loki_trait_simple_sample.c get_par_probs.c read_solar_idfile.c peel_to_par.c update_segs.c param_parse.c param_lex.c read_binfiles.c loki_utils.c kinship.c genedrop.c mat_utils.c output_recomb.c seg_pen.c gen_pen.c loki_ibd.c get_founders.c pass_founder_genes.c touch depend make[2]: Leaving directory '/<>/lokisrc' make[2]: Entering directory '/<>/utils' : -I../include qavg.c hist.c touch depend make[2]: Leaving directory '/<>/utils' touch depend for subdir in libsrc prepsrc lokisrc utils; do \ (cd $subdir; make) \ done make[2]: Entering directory '/<>/libsrc' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o io_stuff.o io_stuff.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ranlib.o ranlib.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o genrand.o genrand.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o ran_xtra.o ran_xtra.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mkbackup.o mkbackup.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o strsep.o strsep.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o utils.o utils.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o remember.o remember.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o peel_utils.o peel_utils.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o qsort.o qsort.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o min_deg.o min_deg.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o bin_tree.o bin_tree.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include/ -Wdate-time -D_FORTIFY_SOURCE=2 -c -o getopt_long.o getopt_long.c /usr/bin/ar cr libgen.a io_stuff.o ranlib.o genrand.o ran_xtra.o mkbackup.o strsep.o utils.o remember.o peel_utils.o qsort.o min_deg.o bin_tree.o getopt_long.o /usr/bin/ranlib libgen.a make[2]: Leaving directory '/<>/libsrc' make[2]: Entering directory '/<>/prepsrc' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o control_parse.o control_parse.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o control_lex.o control_lex.c lex.yy.c:2062:12: warning: ‘input’ defined but not used [-Wunused-function] gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_data.o read_data.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o setup_ped.o setup_ped.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o recode_fact.o recode_fact.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o cleanup.o cleanup.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o restrict_data.o restrict_data.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o match_records.o match_records.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o init_fam.o init_fam.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o output_data.o output_data.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o get_marker_name.o get_marker_name.c /usr/bin/ar cr libprep.a control_parse.o control_lex.o read_data.o setup_ped.o recode_fact.o cleanup.o restrict_data.o match_records.o init_fam.o output_data.o get_marker_name.o /usr/bin/ranlib libprep.a gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prep.o prep.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o calc_nrm.o calc_nrm.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o write_report.o write_report.c write_report.c: In function ‘WriteReport’: write_report.c:286:7: warning: suggest parentheses around operand of ‘!’ or change ‘&’ to ‘&&’ or ‘!’ to ‘~’ [-Wparentheses] if(!elem->type&(ST_MODEL|ST_TRAIT)) continue; ^ write_report.c:300:7: warning: suggest parentheses around operand of ‘!’ or change ‘&’ to ‘&&’ or ‘!’ to ‘~’ [-Wparentheses] if(!elem->type&(ST_MODEL|ST_TRAIT)) continue; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prep_utils.o prep_utils.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gen_elim.o gen_elim.c gen_elim.c: In function ‘min_degree’: gen_elim.c:1075:24: warning: variable ‘best_fg’ set but not used [-Wunused-but-set-variable] int x,i1,k1,k2,*trans,best_fg=0; ^ gen_elim.c: In function ‘find_sequence’: gen_elim.c:1156:17: warning: variable ‘mark’ set but not used [-Wunused-but-set-variable] struct Marker *mark; ^ gen_elim.c:1155:24: warning: variable ‘order1’ set but not used [-Wunused-but-set-variable] int *g_perm,*order=0,*order1; ^ gen_elim.c: In function ‘logical_peel’: gen_elim.c:1268:17: warning: variable ‘mark’ set but not used [-Wunused-but-set-variable] struct Marker *mark; ^ gen_elim.c:1266:27: warning: variable ‘pp1’ set but not used [-Wunused-but-set-variable] struct Peelseq_Head *pp,*pp1; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o prep_do_peel_op.o prep_do_peel_op.c prep_do_peel_op.c: In function ‘do_peel_op’: prep_do_peel_op.c:238:19: warning: variable ‘fill’ set but not used [-Wunused-but-set-variable] double max_terms,fill; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o write_data.o write_data.c (cd compat; make) make[3]: Entering directory '/<>/prepsrc/compat' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../../include -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o compat.o compat.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../../include -I.. -Wdate-time -D_FORTIFY_SOURCE=2 -c -o merlin.o merlin.c merlin.c: In function ‘process_qtdt’: merlin.c:59:60: warning: parameter ‘error_check’ set but not used [-Wunused-but-set-parameter] int process_qtdt(int argc,char *argv[],char **LogFile,int *error_check,loki_time *lt) ^ /usr/bin/ar cr libcompat.a compat.o merlin.o /usr/bin/ranlib libcompat.a make[3]: Leaving directory '/<>/prepsrc/compat' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o prep prep.o calc_nrm.o write_report.o prep_utils.o gen_elim.o prep_do_peel_op.o write_data.o -Wl,-Bsymbolic-functions -Wl,-z,relro -L. -L../libsrc -lprep -lgen -Lcompat -lcompat -lm make[2]: Leaving directory '/<>/prepsrc' make[2]: Entering directory '/<>/lokisrc' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o param_parse.o param_parse.c gcc -c -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -DYY_NO_UNPUT param_lex.c param_lex.c: In function ‘yy_get_next_buffer’: param_lex.c:641:18: warning: comparison between signed and unsigned integer expressions [-Wsign-compare] for ( n = 0; n < max_size && \ ^ param_lex.c:1161:3: note: in expansion of macro ‘YY_INPUT’ YY_INPUT( (&YY_CURRENT_BUFFER_LVALUE->yy_ch_buf[number_to_move]), ^ param_lex.l: At top level: param_lex.c:1260:17: warning: ‘yyunput’ defined but not used [-Wunused-function] static void yyunput (int c, register char * yy_bp ) ^ param_lex.c:1301:16: warning: ‘input’ defined but not used [-Wunused-function] static int input (void) ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_binfiles.o read_binfiles.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_utils.o loki_utils.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o kinship.o kinship.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o genedrop.o genedrop.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o mat_utils.o mat_utils.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o output_recomb.o output_recomb.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o seg_pen.o seg_pen.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o gen_pen.o gen_pen.c gen_pen.c: In function ‘calc_degree’: gen_pen.c:321:24: warning: variable ‘k2’ set but not used [-Wunused-but-set-variable] int i1,j,j1,j2,k=0,k1,k2; ^ gcc -c -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -DIBD_COMPRESS_PROG=\"/bin/gzip\" loki_ibd.c loki_ibd.c: In function ‘SetupIBD’: loki_ibd.c:215:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 5 has type ‘long unsigned int’ [-Wformat=] fprintf(stderr,"Asked for 2*n_locations*n_pairs*sizeof(int)=2*%d*%d*%d=%d bytes\n",j,np,sizeof(int),2*j*np*sizeof(int)); ^ loki_ibd.c:215:20: warning: format ‘%d’ expects argument of type ‘int’, but argument 6 has type ‘long unsigned int’ [-Wformat=] gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o get_founders.o get_founders.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o pass_founder_genes.o pass_founder_genes.c pass_founder_genes.c: In function ‘pass_founder_genes’: pass_founder_genes.c:35:40: warning: variable ‘locus1’ set but not used [-Wunused-but-set-variable] int i,i1,j,s,**genes,**seg,comp,cs,nc,locus1; ^ /usr/bin/ar cr libloki.a param_parse.o param_lex.o read_binfiles.o loki_utils.o kinship.o genedrop.o mat_utils.o output_recomb.o seg_pen.o gen_pen.o loki_ibd.o get_founders.o pass_founder_genes.o /usr/bin/ranlib libloki.a gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki.o loki.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_peel.o loki_peel.c loki_peel.c: In function ‘peel_locus’: loki_peel.c:434:11: warning: ‘z’ may be used uninitialized in this function [-Wmaybe-uninitialized] like1+=z; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_init.o loki_init.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o alloc_loki.o alloc_loki.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_sample.o loki_sample.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_pen.o loki_pen.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_tlmoves.o loki_tlmoves.c loki_tlmoves.c: In function ‘sample_mpos’: loki_tlmoves.c:152:29: warning: variable ‘idd’ set but not used [-Wunused-but-set-variable] int i,j,locus,k2=-1,k3,ids,idd,sx,**seg,s,s1; ^ loki_tlmoves.c:210:26: warning: ‘x’ may be used uninitialized in this function [-Wmaybe-uninitialized] r=.5*(1.0-exp(.02*(x-x1))); ^ loki_tlmoves.c: In function ‘get_tl_position’: loki_tlmoves.c:623:10: warning: ‘z’ may be used uninitialized in this function [-Wmaybe-uninitialized] prior[i]+=z; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o meiosis_scan.o meiosis_scan.c meiosis_scan.c: In function ‘meiosis_scan’: meiosis_scan.c:162:69: warning: variable ‘n_comp1’ set but not used [-Wunused-but-set-variable] int sex,kid,**seg,**seg1,kid1,nkids1,*kids1,lffg,symflag,n_qtl,qtl,n_comp1; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_identity.o loki_identity.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_rand.o sample_rand.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_effects.o sample_effects.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_setup.o loki_setup.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_dump.o loki_dump.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_cens.o sample_cens.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o handle_res.o handle_res.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o print_data.o print_data.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o calc_var_locus.o calc_var_locus.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_output.o loki_output.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o sample_nu.o sample_nu.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_complex_peel.o loki_complex_peel.c loki_complex_peel.c: In function ‘loki_complex_peelop’: loki_complex_peel.c:458:24: warning: format ‘%d’ expects argument of type ‘int’, but argument 8 has type ‘long unsigned int’ [-Wformat=] (void)fprintf(stderr,"\nToo many individuals in output R-Function for marker %s\nn_peel = %d, n_all = %d, n_bits1 = %d, required size = %d, LONG_BIT = %d\n",marker[locus].name,n_peel,n_all,n_bits1,n_peel*n_bits1,LK_LONG_BIT); ^ loki_complex_peel.c:379:9: warning: variable ‘max_terms’ set but not used [-Wunused-but-set-variable] double max_terms,*tp,prob=0.0,z,p1,Konst=0.0; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_npl.o loki_npl.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_simple_sample.o loki_simple_sample.c loki_simple_sample.c: In function ‘loki_simple_sample’: loki_simple_sample.c:25:51: warning: variable ‘tpp2’ set but not used [-Wunused-but-set-variable] double *tp,p1,p2,z,z1,prob=0.0,pp[4],*tmp,*tpp1,*tpp2; ^ loki_simple_sample.c:25:45: warning: variable ‘tpp1’ set but not used [-Wunused-but-set-variable] double *tp,p1,p2,z,z1,prob=0.0,pp[4],*tmp,*tpp1,*tpp2; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_simple_peel.o loki_simple_peel.c loki_simple_peel.c: In function ‘loki_simple_peelop’: loki_simple_peel.c:601:26: warning: ‘cm[0]’ may be used uninitialized in this function [-Wmaybe-uninitialized] id_set2[i]=(cm[X_MAT]&a1)?lump[X_MAT]:i; ^ loki_simple_peel.c:600:26: warning: ‘cm[1]’ may be used uninitialized in this function [-Wmaybe-uninitialized] id_set1[i]=(cm[X_PAT]&a1)?l:i1; ^ loki_simple_peel.c: In function ‘loki_simple_peelop_x’: loki_simple_peel.c:1279:26: warning: ‘cm[0]’ may be used uninitialized in this function [-Wmaybe-uninitialized] id_set2[i]=(cm[X_MAT]&a1)?lump[X_MAT]:i; ^ loki_simple_peel.c:1278:26: warning: ‘cm[1]’ may be used uninitialized in this function [-Wmaybe-uninitialized] id_set1[i]=(cm[X_PAT]&a1)?l:i1; ^ gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_trait_simple_peel.o loki_trait_simple_peel.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o loki_trait_simple_sample.o loki_trait_simple_sample.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o get_par_probs.o get_par_probs.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o read_solar_idfile.o read_solar_idfile.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o peel_to_par.o peel_to_par.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -Wdate-time -D_FORTIFY_SOURCE=2 -c -o update_segs.o update_segs.c gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o loki loki.o loki_peel.o loki_init.o alloc_loki.o loki_sample.o loki_pen.o loki_tlmoves.o meiosis_scan.o loki_identity.o sample_rand.o sample_effects.o loki_setup.o loki_dump.o sample_cens.o handle_res.o print_data.o calc_var_locus.o loki_output.o sample_nu.o loki_complex_peel.o loki_npl.o loki_simple_sample.o loki_simple_peel.o loki_trait_simple_peel.o loki_trait_simple_sample.o get_par_probs.o read_solar_idfile.o peel_to_par.o update_segs.o -Wl,-Bsymbolic-functions -Wl,-z,relro -L. -L../libsrc -lloki -lgen -lm make[2]: Leaving directory '/<>/lokisrc' make[2]: Entering directory '/<>/utils' gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o qavg qavg.c -Wl,-Bsymbolic-functions -Wl,-z,relro -lm gcc -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -W -Wall -pedantic -ffloat-store -Wno-long-long -I../include -o hist hist.c -Wl,-Bsymbolic-functions -Wl,-z,relro make[2]: Leaving directory '/<>/utils' make[1]: Leaving directory '/<>' dh_auto_test -a fakeroot debian/rules binary-arch dh binary-arch dh_testroot -a dh_prep -a dh_installdirs -a debian/rules override_dh_auto_install-arch make[1]: Entering directory '/<>' dh_auto_install -a make -j1 install DESTDIR=/<>/debian/tmp AM_UPDATE_INFO_DIR=no make[2]: Entering directory '/<>' for subdir in libsrc prepsrc lokisrc utils; do \ (cd $subdir; make) \ done make[3]: Entering directory '/<>/libsrc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/libsrc' make[3]: Entering directory '/<>/prepsrc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/prepsrc' make[3]: Entering directory '/<>/lokisrc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/lokisrc' make[3]: Entering directory '/<>/utils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/utils' for subdir in prepsrc lokisrc utils; do \ (cd $subdir; make install) \ done make[3]: Entering directory '/<>/prepsrc' mkdir ../bin for file in prep; do \ /bin/cp $file /<>/debian/loki/usr/bin/; \ /bin/chmod 755 /<>/debian/loki/usr/bin/$file ; \ done make[3]: Leaving directory '/<>/prepsrc' make[3]: Entering directory '/<>/lokisrc' for file in loki; do \ /bin/cp $file /<>/debian/loki/usr/bin/; \ /bin/chmod 755 /<>/debian/loki/usr/bin/$file ; \ done make[3]: Leaving directory '/<>/lokisrc' make[3]: Entering directory '/<>/utils' for file in ext count dist freq sort_error; do \ /bin/sed 's!+PERLPROG+!/usr/bin/perl!' $file.in > /<>/debian/loki/usr/bin/loki_$file; \ /bin/chmod 755 /<>/debian/loki/usr/bin/loki_$file; \ done for file in qavg hist; do \ /bin/cp $file /<>/debian/loki/usr/bin/; \ /bin/chmod 755 /<>/debian/loki/usr/bin/$file ; \ done make[3]: Leaving directory '/<>/utils' make[2]: Leaving directory '/<>' make install prefix=/<>/debian/loki/usr bindir=/<>/debian/loki/usr/bin LDFLAGS="-Wl,-Bsymbolic-functions -Wl,-z,relro" make[2]: Entering directory '/<>' for subdir in libsrc prepsrc lokisrc utils; do \ (cd $subdir; make) \ done make[3]: Entering directory '/<>/libsrc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/libsrc' make[3]: Entering directory '/<>/prepsrc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/prepsrc' make[3]: Entering directory '/<>/lokisrc' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/lokisrc' make[3]: Entering directory '/<>/utils' make[3]: Nothing to be done for 'all'. make[3]: Leaving directory '/<>/utils' for subdir in prepsrc lokisrc utils; do \ (cd $subdir; make install) \ done make[3]: Entering directory '/<>/prepsrc' for file in prep; do \ /bin/cp $file /<>/debian/loki/usr/bin/; \ /bin/chmod 755 /<>/debian/loki/usr/bin/$file ; \ done make[3]: Leaving directory '/<>/prepsrc' make[3]: Entering directory '/<>/lokisrc' for file in loki; do \ /bin/cp $file /<>/debian/loki/usr/bin/; \ /bin/chmod 755 /<>/debian/loki/usr/bin/$file ; \ done make[3]: Leaving directory '/<>/lokisrc' make[3]: Entering directory '/<>/utils' for file in ext count dist freq sort_error; do \ /bin/sed 's!+PERLPROG+!/usr/bin/perl!' $file.in > /<>/debian/loki/usr/bin/loki_$file; \ /bin/chmod 755 /<>/debian/loki/usr/bin/loki_$file; \ done for file in qavg hist; do \ /bin/cp $file /<>/debian/loki/usr/bin/; \ /bin/chmod 755 /<>/debian/loki/usr/bin/$file ; \ done make[3]: Leaving directory '/<>/utils' make[2]: Leaving directory '/<>' make[1]: Leaving directory '/<>' dh_installdocs -a dh_installchangelogs -a debian/rules override_dh_installman-arch make[1]: Entering directory '/<>' dh_installman -a for man in check_het.1 hist.1 loki_count.1 loki_dist.1 loki_ext.1 loki_freq.1 loki_sort_error.1 prep.1 qavg.1 ; do \ ln -s loki.1.gz debian/loki/usr/share/man/man1/${man}.gz ; \ done make[1]: Leaving directory '/<>' dh_perl -a dh_link -a dh_strip_nondeterminism -a dh_compress -a dh_fixperms -a dh_strip -a dh_strip debug symbol extraction: not enabling -a because /CurrentlyBuilding exists dh_strip debug symbol extraction: all non-arch-all packages for this build platform s390x: loki dh_strip debug symbol extraction: packages to act on: loki dh_strip debug symbol extraction: ignored packages: Using buildid for compat level >= 9 dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package loki: unused substitution variable ${perl:Depends} /usr/bin/pkg_create_dbgsym: deferring build of .ddeb to dh_gencontrol dh_makeshlibs -a dh_shlibdeps -a dh_installdeb -a dh_gencontrol -a dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe dpkg-gencontrol: warning: package loki: unused substitution variable ${perl:Depends} dh_gencontrol debug symbol wrapper: all non-arch-all packages for this build platform s390x: loki dh_gencontrol debug symbol wrapper: packages to act on: loki dh_gencontrol debug symbol wrapper: ignored packages: dh_gencontrol debug symbol wrapper: processing package loki (pkgdir debian/loki, ddeb package dir debian/loki-dbgsym) dh_gencontrol debug symbol wrapper: building loki-dbgsym_2.4.7.4-6_s390x.ddeb dpkg-deb: building package 'loki-dbgsym' in '../loki-dbgsym_2.4.7.4-6_s390x.ddeb'. dh_md5sums -a dh_builddeb -a INFO: pkgstriptranslations version 129 pkgstriptranslations: processing loki (in debian/loki); do_strip: , oemstrip: pkgmaintainermangler: Maintainer field overridden to "Ubuntu Developers " pkgstripfiles: processing control file: debian/loki/DEBIAN/control, package loki, directory debian/loki pkgstripfiles: Running PNG optimization (using 4 cpus) for package loki ... pkgstripfiles: No PNG files. dpkg-deb: building package 'loki' in '../loki_2.4.7.4-6_s390x.deb'. dpkg-genchanges -B -mLaunchpad Build Daemon >../loki_2.4.7.4-6_s390x.changes dpkg-genchanges: binary-only arch-specific upload (source code and arch-indep packages not included) dpkg-source --after-build loki-2.4.7.4 dpkg-buildpackage: binary-only upload (no source included) -------------------------------------------------------------------------------- Build finished at 2022-11-25T21:28:16Z Finished -------- I: Built successfully +------------------------------------------------------------------------------+ | Changes | +------------------------------------------------------------------------------+ loki_2.4.7.4-6_s390x.changes: ----------------------------- Format: 1.8 Date: Tue, 24 Nov 2015 19:34:27 +0100 Source: loki Binary: loki loki-doc Architecture: s390x Version: 2.4.7.4-6 Distribution: xenial Urgency: medium Maintainer: Launchpad Build Daemon Changed-By: Andreas Tille Description: loki - MCMC linkage analysis on general pedigrees loki-doc - MCMC linkage analysis on general pedigrees (PS manual) Closes: 806070 Changes: loki (2.4.7.4-6) unstable; urgency=medium . * cme fix dpkg-control * apply install target only for architecture dependent target Closes: #806070 * Add DEP3 header * DEP5 fix Checksums-Sha1: b4fc79bfb452a29226206fe541692b98bc40bf8e 335976 loki_2.4.7.4-6_s390x.deb Checksums-Sha256: b587c820b79b2a30d92f3f92f36e2d97c7169bc42591a5702c75a5a8c9955a8d 335976 loki_2.4.7.4-6_s390x.deb Files: 7492a60af6997eb92c3e75580a0a031a 335976 science optional loki_2.4.7.4-6_s390x.deb /<>/loki_2.4.7.4-6_s390x.changes.new could not be renamed to /<>/loki_2.4.7.4-6_s390x.changes: Illegal seek Distribution field may be wrong!!! +------------------------------------------------------------------------------+ | Buildinfo | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Package contents | +------------------------------------------------------------------------------+ loki_2.4.7.4-6_s390x.deb ------------------------ new debian package, version 2.0. size 335976 bytes: control archive=1164 bytes. 744 bytes, 16 lines control 1005 bytes, 17 lines md5sums Package: loki Version: 2.4.7.4-6 Architecture: s390x Maintainer: Ubuntu Developers Original-Maintainer: Debian Med Packaging Team Installed-Size: 915 Depends: libc6 (>= 2.23) Suggests: loki-doc Section: science Priority: optional Description: MCMC linkage analysis on general pedigrees Performs Markov chain Monte Carlo multipoint linkage analysis on large, complex pedigrees. The current package supports analyses on quantitative traits only, although this restriction will be lifted in later versions. Joint estimation of QTL number, position and effects uses Reversible Jump MCMC. It is also possible to perform affected only IBD sharing analyses. drwxr-xr-x root/root 0 2022-11-25 21:28 ./ drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/ drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/bin/ -rwxr-xr-x root/root 14336 2022-11-25 21:28 ./usr/bin/hist -rwxr-xr-x root/root 523864 2022-11-25 21:28 ./usr/bin/loki -rwxr-xr-x root/root 8539 2022-11-25 21:28 ./usr/bin/loki_count -rwxr-xr-x root/root 8426 2022-11-25 21:28 ./usr/bin/loki_dist -rwxr-xr-x root/root 9834 2022-11-25 21:28 ./usr/bin/loki_ext -rwxr-xr-x root/root 3471 2022-11-25 21:28 ./usr/bin/loki_freq -rwxr-xr-x root/root 1442 2022-11-25 21:28 ./usr/bin/loki_sort_error -rwxr-xr-x root/root 317928 2022-11-25 21:28 ./usr/bin/prep -rwxr-xr-x root/root 14336 2022-11-25 21:28 ./usr/bin/qavg drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/share/ drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/share/doc/ drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/share/doc/loki/ -rw-r--r-- root/root 1990 2003-04-15 11:49 ./usr/share/doc/loki/README -rw-r--r-- root/root 894 2013-09-12 08:58 ./usr/share/doc/loki/README.Debian -rw-r--r-- root/root 471 2002-04-15 14:06 ./usr/share/doc/loki/README.known_systems -rw-r--r-- root/root 580 2002-07-11 15:06 ./usr/share/doc/loki/README.multiple_records -rw-r--r-- root/root 1910 2002-07-11 15:06 ./usr/share/doc/loki/README.parallel_runs -rw-r--r-- root/root 1726 2015-11-24 18:49 ./usr/share/doc/loki/changelog.Debian.gz -rw-r--r-- root/root 1942 2015-11-24 18:49 ./usr/share/doc/loki/copyright drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/share/man/ drwxr-xr-x root/root 0 2022-11-25 21:28 ./usr/share/man/man1/ lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/check_het.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/hist.1.gz -> loki.1.gz -rw-r--r-- root/root 1005 2022-11-25 21:28 ./usr/share/man/man1/loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/loki_count.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/loki_dist.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/loki_ext.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/loki_freq.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/loki_sort_error.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/prep.1.gz -> loki.1.gz lrwxrwxrwx root/root 0 2022-11-25 21:28 ./usr/share/man/man1/qavg.1.gz -> loki.1.gz +------------------------------------------------------------------------------+ | Post Build | +------------------------------------------------------------------------------+ +------------------------------------------------------------------------------+ | Cleanup | +------------------------------------------------------------------------------+ Purging /<> Not removing build depends: as requested +------------------------------------------------------------------------------+ | Summary | +------------------------------------------------------------------------------+ Build Architecture: s390x Build Type: any Build-Space: 14492 Build-Time: 28 Distribution: xenial Host Architecture: s390x Install-Time: 9 Job: loki_2.4.7.4-6.dsc Machine Architecture: s390x Package: loki Package-Time: 37 Source-Version: 2.4.7.4-6 Space: 14492 Status: successful Version: 2.4.7.4-6 -------------------------------------------------------------------------------- Finished at 2022-11-25T21:28:16Z Build needed 00:00:37, 14492k disk space Adding user buildd to group lxd RUN: /usr/share/launchpad-buildd/bin/in-target scan-for-processes --backend=chroot --series=xenial --arch=s390x PACKAGEBUILD-24715221 Scanning for processes to kill in build PACKAGEBUILD-24715221