--- raster3d-2.7d+0.orig/debian/control +++ raster3d-2.7d+0/debian/control @@ -0,0 +1,47 @@ +Source: raster3d +Section: non-free/science +Priority: optional +Maintainer: Nelson A. de Oliveira +Build-Depends: cdbs, patchutils, debhelper (>= 5), gfortran, libtiff4-dev, libjpeg62-dev, libpng12-dev, xutils +Standards-Version: 3.7.2 + +Package: raster3d +Architecture: any +Depends: ${shlibs:Depends}, imagemagick, gs-gpl | gs-afpl | gs-esp +Suggests: raster3d-doc (= ${source:Version}) +Description: tools for generating images of proteins or other molecules + Raster3D is a set of tools for generating high quality raster images of + proteins or other molecules. The core program renders spheres, triangles, + cylinders, and quadric surfaces with specular highlighting, Phong shading, + and shadowing. It uses an efficient software Z-buffer algorithm which is + independent of any graphics hardware. Ancillary programs process atomic + coordinates from PDB files into rendering descriptions for pictures composed + of ribbons, space-filling atoms, bonds, ball+stick, etc. Raster3D can also be + used to render pictures composed in other programs such as Molscript in + glorious 3D with highlights, shadowing, etc. Output is to pixel image files + with 24 bits of color information per pixel. + . + Homepage: http://www.bmsc.washington.edu/raster3d/raster3d.html +XB-Tag: field::biology, implemented-in::fortran, interface::commandline, role::program, scope::application, use::converting, use::viewing, works-with-format::jpg, works-with-format::png, works-with::3dmodel, works-with::image, works-with::image:raster + +Package: raster3d-doc +Section: non-free/doc +Architecture: all +Recommends: raster3d (= ${source:Version}), imagemagick +Suggests: pdf-viewer, perl, www-browser +Description: documents and example files for Raster3D + Raster3D is a set of tools for generating high quality raster images of + proteins or other molecules. The core program renders spheres, triangles, + cylinders, and quadric surfaces with specular highlighting, Phong shading, + and shadowing. It uses an efficient software Z-buffer algorithm which is + independent of any graphics hardware. Ancillary programs process atomic + coordinates from PDB files into rendering descriptions for pictures composed + of ribbons, space-filling atoms, bonds, ball+stick, etc. Raster3D can also be + used to render pictures composed in other programs such as Molscript in + glorious 3D with highlights, shadowing, etc. Output is to pixel image files + with 24 bits of color information per pixel. + . + This package contains documents and example files for the raster3d package. + . + Homepage: http://www.bmsc.washington.edu/raster3d/raster3d.html +XB-Tag: devel::doc, devel::examples, field::biology, made-of::data:html, made-of::data:pdf, role::documentation --- raster3d-2.7d+0.orig/debian/rings3d.1 +++ raster3d-2.7d+0/debian/rings3d.1 @@ -0,0 +1,78 @@ +.ad l +.nh +.TH RINGS3D 1 "" "Raster3D" +.SH NAME + +rigns3d - produces a file of ring-filling triangles from a PDB file + +.SH SYNOPSIS + +rings3d [-bases] [-protein] [-sugars] < infile.pdb > outfile.r3d + +.PP +\fIrings3d\fP searches through a PDB file looking for residues containing +5- or 6-membered rings, then produces a Raster3D output file of ring-filling +triangles. + +\fIrings3d\fP matches residue types from an internal list of residue and +atom names. It will fail to find residues not in its list, and fail to +recognize atoms with non-standard names. +.PP +.SH EXAMPLES +.PP +render a DNA molecule with the bases filled in: +.PP + cat $R3D_LIB/dna.colours dna.pdb | rods -radius 0.05 > temp.1 + rings3d -bases < dna.pdb > temp.2 + cat temp.1 temp.2 | render -tiff dna.tiff +.SH OPTIONS + +.B "-bases" +.PP +Fills in purine and pyrimidine rings from A C G T U residues. + +.B "-protein" +.PP +Fills in sidechain rings of HIS PHE TRP and TYR residues. + +.B "-sugars" +.PP +[This is the default] Fills in pyranose rings of GAL GLC NAG NGA MAN SIA +residues. + +.SH BUGS +.B limited residue types +.PP +The database of residue types should be kept externally, so you don't +have to rebuild the program to add a new type. +There should be an option to search for ring systems in un-recognized +residue types. +.B crinkled planes +.PP +There should be an option to do a least-squares best plane through +supposedly flat rings. Then again, seeing a crease in a "flat" ring +may force people to consider whether their planarity restraints are +tight enough. + +.SH SOURCE +.B anonymous ftp site: + ftp.bmsc.washington.edu + +.B web URL: + http://www.bmsc.washington.edu/raster3d/raster3d.html + +.B contact: + Ethan A Merritt + Dept of Biological Structure Box 357742 + University of Washington, Seattle WA 98195 + merritt@u.washington.edu + +.SH SEE ALSO +Raster3D(l) +.PP +.SH AUTHORS + +Ethan A Merritt. +.PP +This manual page was written by Nelson A. de Oliveira , +for the Debian project (but may be used by others). --- raster3d-2.7d+0.orig/debian/raster3d-doc.doc-base +++ raster3d-2.7d+0/debian/raster3d-doc.doc-base @@ -0,0 +1,16 @@ +Document: raster3d +Title: Raster3D 2.7d Manual +Author: Ethan. A Merritt +Abstract: The Raster3D molecular graphics package consists of a core program + (render) and a number of ancillary programs that read atomic coordinates from + PDB (Protein Data Bank) files to produce scene descriptions for input to + render. Raster3D can also render images composed using other programs such + as Molscript and XtalView. +Section: Apps/Science + +Format: PDF +Files: /usr/share/doc/raster3d/R3D_manual.pdf.gz + +Format: HTML +Index: /usr/share/doc/raster3d/html/index.html +Files: /usr/share/doc/raster3d/html/*.html --- raster3d-2.7d+0.orig/debian/raster3d.docs +++ raster3d-2.7d+0/debian/raster3d.docs @@ -0,0 +1 @@ +BUGS --- raster3d-2.7d+0.orig/debian/patches/example8.script.diff +++ raster3d-2.7d+0/debian/patches/example8.script.diff @@ -0,0 +1,19 @@ +--- raster3d-2.7c.orig/examples/example8.script ++++ raster3d-2.7c/examples/example8.script +@@ -1,9 +1,14 @@ +-#!/bin/csh ++#!/bin/bash + # + # Demonstrate stereo3d script by making stereo pair of + # view down pore of LT B-pentamer + # +-if (! $?TMPDIR) setenv TMPDIR /tmp ; endif ++if [ "$TMPDIR" ]; then ++ tmp=$TMPDIR ++else ++ tmp=/tmp ++fi ++export TMPDIR=$tmp + # + # First we make a VDW model of the B-pentamer itself + # --- raster3d-2.7d+0.orig/debian/patches/example2.sgi.diff +++ raster3d-2.7d+0/debian/patches/example2.sgi.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example2.sgi ++++ raster3d-2.7c/examples/example2.sgi +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt March 1993 + # Illustration of composed figure using Raster3D + # (assumes libimage support from 4DGifts distribution kit on SGI) --- raster3d-2.7d+0.orig/debian/patches/example1.script.diff +++ raster3d-2.7d+0/debian/patches/example1.script.diff @@ -0,0 +1,15 @@ +--- raster3d-2.7c.orig/examples/example1.script ++++ raster3d-2.7c/examples/example1.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt January 2003 + # Illustration of + # material properties +@@ -6,5 +6,5 @@ + # R3D_LIB environmental variable + # gamma correction applied while rendering + # +-setenv R3D_LIB ../materials ++export R3D_LIB="../materials" + render -gamma 1.1 -png < example1.r3d | display png:- --- raster3d-2.7d+0.orig/debian/patches/example3.script.diff +++ raster3d-2.7d+0/debian/patches/example3.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example3.script ++++ raster3d-2.7c/examples/example3.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt March 1993 + # Illustration of simple figure using Raster3D + # Assumes ImageMagick installed, if you are using the SGI libimage --- raster3d-2.7d+0.orig/debian/patches/Makefile.diff +++ raster3d-2.7d+0/debian/patches/Makefile.diff @@ -0,0 +1,32 @@ +diff -Nur raster3d-2.7d/Makefile raster3d-2.7d.new/Makefile +--- raster3d-2.7d/Makefile 2006-04-12 15:46:10.000000000 -0300 ++++ raster3d-2.7d.new/Makefile 2006-05-03 18:20:33.000000000 -0300 +@@ -61,9 +61,9 @@ + @cp Makefile.template Makefile.incl + @echo OS = linux >> Makefile.incl + @echo CC = gcc >> Makefile.incl +- @echo CFLAGS = -g -w -Dgfortran >> Makefile.incl ++ @echo CFLAGS = -g -O2 -Wall -Dgfortran >> Makefile.incl + @echo FC = gfortran >> Makefile.incl +- @echo FFLAGS = -g -w -O -ffixed-line-length-132 >> Makefile.incl ++ @echo FFLAGS = -g -Wall -O2 -ffixed-line-length-132 >> Makefile.incl + @echo RM = /bin/rm -f >> Makefile.incl + @echo OSDEFS = -DLINUX -DNETWORKBYTEORDER >> Makefile.incl + @echo include Makefile.package >> Makefile.incl +@@ -222,12 +222,14 @@ + install: all + if [ ! -e $(prefix) ] ; then mkdirhier $(prefix) ; fi + if [ ! -e $(bindir) ] ; then mkdirhier $(bindir) ; fi +- chmod 755 $(PROGS); cp $(PROGS) $(bindir) ++ chmod 755 $(PROGS); ++ for i in normal3d render ; do cp $$i $(bindir)/$$i.real ; done ++ cp avs2ps balls label3d rastep ribbon rings3d rods stereo3d $(bindir) + chmod 755 $(SCRIPTS); cp $(SCRIPTS) $(bindir) + if [ ! -e $(datadir) ] ; then mkdirhier $(datadir) ; fi + cp materials/* $(datadir) + if [ ! -e $(mandir) ] ; then mkdirhier $(mandir) ; fi +- cp doc/*.l $(mandir) ++ for i in doc/*.l ; do j=$${i/doc/}; cp $$i $(mandir)/$${j/.l/.1} ; done + if [ ! -e $(htmldir) ] ; then mkdirhier $(htmldir) ; fi + cp html/* $(htmldir) + if [ ! -e $(examdir) ] ; then mkdirhier $(examdir) ; fi --- raster3d-2.7d+0.orig/debian/patches/example4.script.diff +++ raster3d-2.7d+0/debian/patches/example4.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example4.script ++++ raster3d-2.7c/examples/example4.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt April 2002 + # Illustration of combined Molscript/Raster3D application + # --- raster3d-2.7d+0.orig/debian/patches/example2.script.diff +++ raster3d-2.7d+0/debian/patches/example2.script.diff @@ -0,0 +1,18 @@ +--- raster3d-2.7c.orig/examples/example2.script ++++ raster3d-2.7c/examples/example2.script +@@ -1,11 +1,11 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt March 1993 + # Illustration of composed figure using Raster3D + # (assumes ImageMagick installed, if not then don't pipe output from render) + # +-setenv TMPFILE `mktemp /tmp/ex2.XXXXXX` || exit 1 +-setenv TMPBALLS `mktemp /tmp/ex2.XXXXXX` || exit 1 +-setenv TMPSUGAR `mktemp /tmp/ex2.XXXXXX` || exit 1 ++export TMPFILE=`mktemp /tmp/ex2.XXXXXX` || exit 1 ++export TMPBALLS=`mktemp /tmp/ex2.XXXXXX` || exit 1 ++export TMPSUGAR=`mktemp /tmp/ex2.XXXXXX` || exit 1 + # + # figure consists of E. coli enterotoxin (protein as spheres) + # binding to GM1 pentasaccharide (sugars represented as rods) --- raster3d-2.7d+0.orig/debian/patches/example9.script.diff +++ raster3d-2.7d+0/debian/patches/example9.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example9.script ++++ raster3d-2.7c/examples/example9.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # + # Thermal ellipsoid representations + # GM1-pentasaccharide from a complex with the cholera toxin B-pentamer --- raster3d-2.7d+0.orig/debian/patches/msms_example.script.diff +++ raster3d-2.7d+0/debian/patches/msms_example.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/msms/msms_example.script ++++ raster3d-2.7c/examples/msms/msms_example.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # + # Calculate molecular surface of a galactose molecule using MSMS + # --- raster3d-2.7d+0.orig/debian/patches/example5.script.diff +++ raster3d-2.7d+0/debian/patches/example5.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example5.script ++++ raster3d-2.7c/examples/example5.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt November 2000 + # Illustration of complex figure created by merging files from + # Raster3D, Molscript, and GRASP. --- raster3d-2.7d+0.orig/debian/patches/Makefile.template.diff +++ raster3d-2.7d+0/debian/patches/Makefile.template.diff @@ -0,0 +1,24 @@ +--- raster3d-2.7c.orig/Makefile.template 2003-10-20 20:50:11.000000000 -0200 ++++ raster3d-2.7c.new/Makefile.template 2005-04-01 17:39:19.000000000 -0300 +@@ -8,15 +8,15 @@ + # + # Where to install the program, data files, and manuals + # +-prefix = /usr/local ++prefix = /usr + bindir = $(prefix)/bin +-datadir = $(prefix)/share/Raster3D/materials +-mandir = $(prefix)/man/manl +-htmldir = $(prefix)/share/Raster3D/html +-examdir = $(prefix)/share/Raster3D/examples ++datadir = $(prefix)/share/raster3d/materials ++mandir = $(prefix)/share/man/man1 ++htmldir = $(prefix)/share/raster3d/html ++examdir = $(prefix)/share/raster3d/examples + + INCDIRS = -I/usr/include -I/usr/local/include +-LIBDIRS = -L/usr/local/lib ++LIBDIRS = -L/usr/lib + + # + # TIFF support (enabled by default) --- raster3d-2.7d+0.orig/debian/patches/example7.script.diff +++ raster3d-2.7d+0/debian/patches/example7.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example7.script ++++ raster3d-2.7c/examples/example7.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # + # Example 7 + # --- raster3d-2.7d+0.orig/debian/patches/example6.script.diff +++ raster3d-2.7d+0/debian/patches/example6.script.diff @@ -0,0 +1,8 @@ +--- raster3d-2.7c.orig/examples/example6.script ++++ raster3d-2.7c/examples/example6.script +@@ -1,4 +1,4 @@ +-#!/bin/csh ++#!/bin/bash + # E A Merritt November 1999 + # Illustration of V2.5 command line options + # Assumes ImageMagick installed --- raster3d-2.7d+0.orig/debian/patches/BUGS.diff +++ raster3d-2.7d+0/debian/patches/BUGS.diff @@ -0,0 +1,51 @@ +diff -Nur raster3d-2.7d/BUGS raster3d-2.7d.new/BUGS +--- raster3d-2.7d/BUGS 2006-04-11 15:52:29.000000000 -0300 ++++ raster3d-2.7d.new/BUGS 2006-05-03 18:15:37.000000000 -0300 +@@ -1,11 +1,3 @@ +-All platforms +-============= +- +- ==> ImageMagick keeps on changing their option syntax and delegates +- file format. You may have to tweak the calls to ImageMagick +- utilities in the stereo3d and label3d scripts to match your local +- version of ImageMagick. +- + ==> Stereo pairs can be generated by using either a shear operation or + by using an angular offset. Both have problems. The shear distorts + bounding surfaces. The angular offset displaces specular highlights +@@ -28,35 +20,3 @@ + - Labels with TeX-like escape sequences are always treated as Left-Align. + - Angstrom symbol only loaded into Times/Helvetica fonts. + - ribbon coloring scheme 6 doesn't work +- +-SGI +-=== +- - In general the JPEG and PNG libraries supplied with Irix are bad, +- and should be rebuilt from current source +- - Some versions of Irix contain a header file jpeglib.h that is not +- compatible with the actual libjpeg in the same distribution +- - The PNG library and header files are from an ancient beta-test version. +- You must choose between disabling PNG support in Makefile.template or +- installing a newer version of libpng on your machine +- +-AIX +-=== +- File indirection in render doesn't work, because opening Fortran +- LUN 6 clobbers C I/O in local.c +- Work-around : +- Patch file render_patch.aix modifies render to use +- LUNs 5,4,3,2,1 for file indirection rather than 6,7,... +- dispose='delete' not permitted in open statement +- Work-around : +- None; temp files accumulate until deleted +- +-linux (g77 and gfortran compilers) +-==================== +- +- The g77 and gfortran compilers do not support file open options +- CARRIAGECONTROL='LIST' or DISPOSE='DELETE'. +- Work-around : +- 'make linux' deletes these specifications from the source +- files; unfortunately, this means that temporary files do not +- automatically get deleted from the system temp directory. +- --- raster3d-2.7d+0.orig/debian/raster3d-doc.README.Debian +++ raster3d-2.7d+0/debian/raster3d-doc.README.Debian @@ -0,0 +1,8 @@ +raster3d-doc for Debian +-------------------- + +Note that some examples included on raster3d-doc needs raster3d and +imagemagick packages installed to run properly. If you want to get full +functionality of the example scripts, you need to install them. + + -- Nelson A. de Oliveira , Sun, 10 Apr 2005 00:17:27 -0300 --- raster3d-2.7d+0.orig/debian/changelog +++ raster3d-2.7d+0/debian/changelog @@ -0,0 +1,72 @@ +raster3d (2.7d+0-1) unstable; urgency=low + + * Upstream author released an updated source, but with the same version + as before... + - Fixed some issues with rastep. + * New maintainer address; + * Added tags on debian/control. + + -- Nelson A. de Oliveira Thu, 14 Dec 2006 02:34:26 -0200 + +raster3d (2.7d-2) unstable; urgency=low + + * Rebuilt to fix dependency on uninstallable libgfortran0 (Closes: #382323); + * debian/control: replaced "${Source-Version}" with "${source:Version}"; + * debian/raster3d-doc.doc-base: updated Raster3D version. + + -- Nelson A. de Oliveira Thu, 10 Aug 2006 15:41:14 -0300 + +raster3d (2.7d-1) unstable; urgency=low + + * New upstream version: + - Compiling with gfortran instead g77. + * Updated Standards-Version to 3.7.2 (no changes needed); + * Using debhelper compatibility version 5; + * Changed order of Depends (gs-gpl comes first now); + * Removed patches that were applied on upstream source code + (avs2ps.c.diff, avs2ps.l.diff, label3d.l.diff, local.c.diff, + normal.l.diff, r3d_objects.l.diff, r3dtops.l.diff, rastep.l.diff, + stereo3d.l.diff and ungz.c.diff); + * Removed versioned Build-Depends on cdbs and patchutils; + * Removed versioned Depends on imagemagick. + + -- Nelson A. de Oliveira Wed, 3 May 2006 13:31:37 -0300 + +raster3d (2.7c-5) unstable; urgency=low + + * Fix FTBFS (amd64/gcc-4.0): -malign-double makes no sense in the + 64bit mode (Closes: #314239). + Thanks to Andreas Jochens for pointing this. + + -- Nelson A. de Oliveira Thu, 16 Jun 2005 19:53:59 -0300 + +raster3d (2.7c-4) unstable; urgency=low + + * Not using DEB_AUTO_UPDATE_DEBIAN_CONTROL of CDBS anymore; + * Changed "gs-gpl" on Depends to "gs-afpl | gs-gpl | gs-esp". + + -- Nelson A. de Oliveira Thu, 2 Jun 2005 18:49:26 -0300 + +raster3d (2.7c-3) unstable; urgency=low + + * Wrappers for normal3d and render were not passing arguments to the real + programs. Corrected now. + + -- Nelson A. de Oliveira Wed, 1 Jun 2005 18:15:44 -0300 + +raster3d (2.7c-2) unstable; urgency=low + + * Clarified distribution of modified version (Closes: #308973): + - Updated copyright file; + - Included diffs between original source code and Debian's version. + The diffs are available at /usr/share/doc/raster3d/diffs.tar.gz + * Updated Standards-Version to 3.6.1.1 (no modifications needed). + + -- Nelson A. de Oliveira Mon, 16 May 2005 16:47:29 -0300 + +raster3d (2.7c-1) unstable; urgency=low + + * Initial Release (Closes: #303941). + + -- Nelson A. de Oliveira Fri, 25 Mar 2005 17:06:13 -0300 + --- raster3d-2.7d+0.orig/debian/copyright +++ raster3d-2.7d+0/debian/copyright @@ -0,0 +1,46 @@ +This package was debianized by Nelson A. de Oliveira on +Fri, 25 Mar 2005 17:06:13 -0300. + +It was downloaded from http://www.bmsc.washington.edu/raster3d/ + +Upstream Author: + +Originally written by David J. Bacon and Wayne F. Anderson; extensions, +revisions, modifications, ancillary programs by Mark Israel, +Stephen Samuel, Michael Murphy, Albert Berghuis, and Ethan A Merritt + - Department of Biochemistry & Biomolecular +Structure Center - University of Washington, Seattle + +Copyright: + Copyright to the Raster3D code is held by Ethan Merritt and + other contributors. The code may be used or modified without + restriction. Modified versions may only be redistributed with + prior permission and must be accompanied by source code patches + against a previous official release of the Raster3D source code. + +Permission from Ethan, to distribute Raster3D on Debian: + +It is fine to use Raster3D for commercial purposes; +in fact you can see from the covers of many scientific journals that it is +used for this by many publishers. Raster3D may not be sold, however. + +As I told you, I have explicitly given Debian permission to include +Raster3D in the past, but it never seems to emerge from the other +end of the process. + +CITING THE PROGRAM +If you use the package to prepare figures for publication, please give +proper credit to the authors; the proper citation for the most recent +version of the package is Merritt & Bacon (1997) as given below. + +REFERENCES +Bacon, D.J., & Anderson, W.F. (1988) ``A Fast Algorithm for +Rendering Space-Filling Molecule Pictures''. (abstract of paper +presented at the Seventh Annual Meeting of the Molecular Graphics +Society). J. Molec. Graphics 6, 219-220. +Kraulis, P.J. (1991) ``MOLSCRIPT: a program to produce both detailed +and schematic plots of protein structures''. J. Appl. Cryst. 24, 946-950. +Merritt, E.A. & Murphy, M.E.P. (1994) ``Raster3D Version 2.0 - A Program +for Photorealistic Molecular Graphics''. Acta Cryst. D50, 869-873. +Merritt, E.A. & Bacon, D.J. (1997) ``Raster3D Photorealistic Molecular +Graphics''. Methods in Enzymology 277, 505-524. --- raster3d-2.7d+0.orig/debian/install +++ raster3d-2.7d+0/debian/install @@ -0,0 +1,13 @@ +debian/tmp/bin/avs2ps usr/bin/ +debian/tmp/bin/balls usr/bin/ +debian/tmp/bin/label3d usr/bin/ +debian/tmp/bin/rastep usr/bin/ +debian/tmp/bin/ribbon usr/bin/ +debian/tmp/bin/rings3d usr/bin/ +debian/tmp/bin/rods usr/bin/ +debian/tmp/bin/stereo3d usr/bin/ +debian/tmp/bin/*.real usr/lib/raster3d/ +debian/tmp/share/man/ usr/share/ +debian/wrappers/* usr/bin/ +materials/ usr/share/raster3d/ +debian/diffs.tar usr/share/doc/raster3d/ --- raster3d-2.7d+0.orig/debian/watch +++ raster3d-2.7d+0/debian/watch @@ -0,0 +1,3 @@ +version=3 + +http://www.bmsc.washington.edu/raster3d/Raster3D_(.*)\.tar\.gz --- raster3d-2.7d+0.orig/debian/rules +++ raster3d-2.7d+0/debian/rules @@ -0,0 +1,22 @@ +#!/usr/bin/make -f + +include /usr/share/cdbs/1/rules/simple-patchsys.mk +include /usr/share/cdbs/1/rules/debhelper.mk +include /usr/share/cdbs/1/class/makefile.mk + +DEB_DESTDIR = $(CURDIR)/debian/tmp +DEB_MAKE_CLEAN_TARGET := clean +DEB_MAKE_INSTALL_TARGET := install prefix=$(DEB_DESTDIR) +DEB_INSTALL_CHANGELOGS_raster3d := CHANGELOG +DEB_INSTALL_DOCS_ALL := +DEB_COMPRESS_EXCLUDE := .pdb .r3d .mol + +cleanbuilddir:: + rm -f debian/diffs.tar + +makebuilddir/raster3d:: + mkdir debian/tmp + cd debian/patches/ && tar -cf ../diffs.tar *.diff || true + +configure/raster3d:: + $(MAKE) linux-gfortran --- raster3d-2.7d+0.orig/debian/wrappers/render +++ raster3d-2.7d+0/debian/wrappers/render @@ -0,0 +1,7 @@ +#!/bin/sh +if [ "$R3D_LIB" = "" ] +then + export R3D_LIB=/usr/share/raster3d/materials +fi + +/usr/lib/raster3d/render.real "$@" --- raster3d-2.7d+0.orig/debian/wrappers/normal3d +++ raster3d-2.7d+0/debian/wrappers/normal3d @@ -0,0 +1,7 @@ +#!/bin/sh +if [ "$R3D_LIB" = "" ] +then + export R3D_LIB=/usr/share/raster3d/materials +fi + +/usr/lib/raster3d/normal3d.real "$@" --- raster3d-2.7d+0.orig/debian/compat +++ raster3d-2.7d+0/debian/compat @@ -0,0 +1 @@ +5 --- raster3d-2.7d+0.orig/debian/raster3d-doc.install +++ raster3d-2.7d+0/debian/raster3d-doc.install @@ -0,0 +1,3 @@ +doc/R3D_manual.pdf usr/share/doc/raster3d/ +debian/tmp/share/raster3d/examples/ usr/share/doc/raster3d/ +debian/tmp/share/raster3d/html/ usr/share/doc/raster3d/ --- raster3d-2.7d+0.orig/debian/raster3d.manpages +++ raster3d-2.7d+0/debian/raster3d.manpages @@ -0,0 +1 @@ +debian/rings3d.1 --- raster3d-2.7d+0.orig/debian/raster3d.README.Debian +++ raster3d-2.7d+0/debian/raster3d.README.Debian @@ -0,0 +1,15 @@ +raster3d for Debian +-------------------- + +The raster3d-doc package might be important for new users or people +wanting to learn more about Raster3D. Besides manuals in HTML and +PDF formats (complementing the already included man pages on raster3d +package), raster3d-doc also contains example files (PDBs, images and +scripts) showing Raster3D's capabilities. + +/usr/share/doc/raster3d/diffs.tar.gz +This file has the diffs between original source code of Raster3D and +Debian's version. Upstream author allowed to distribute modified +versions of his program if the differences were included. + + -- Nelson A. de Oliveira , Sun, 10 Apr 2005 00:17:27 -0300 --- raster3d-2.7d+0.orig/debian/raster3d-doc.links +++ raster3d-2.7d+0/debian/raster3d-doc.links @@ -0,0 +1 @@ +usr/share/doc/raster3d/html/raster3d.html usr/share/doc/raster3d/html/index.html