Activity log for bug #1184034

Date Who What changed Old value New value Message
2013-05-24 23:16:20 Kate Cronin bug added bug
2013-05-24 23:18:28 Kate Cronin description Basic info: # uname -a Linux 2.6.32-235.el6.x86_64 #1 SMP Fri Feb 17 11:48:53 EST 2012 x86_64 x86_64 x86_64 GNU/Linux # rpm -qa | grep -i percona percona-xtrabackup-2.0.7-552.rhel6.x86_64 Percona-XtraDB-Cluster-shared-5.5.30-23.7.4.406.rhel6.x86_64 percona-toolkit-2.1.4-1.noarch Percona-XtraDB-Cluster-client-5.5.30-23.7.4.406.rhel6.x86_64 Percona-Server-shared-compat-5.5.30-rel30.2.508.rhel6.x86_64 Percona-XtraDB-Cluster-server-5.5.30-23.7.4.406.rhel6.x86_64 Percona-XtraDB-Cluster-galera-2.5-1.150.rhel6.x86_64 I can quite reliably crash MySQL by running 'nmap' against the server running it, but only as a non-root user. If I run nmap as root, all's well. I think the difference lies in how nmap scans ports when run as root vs. non-root. Some strace output: as root, it uses "sendto()": sendto(3, "E\0\0,\260x\0\0(\6\211#\212H\204\320\212H\277\317\364v\21\327\261\"?\313\0\0\0\0"..., 44, 0, {sa_family=AF_INET, sin_port=htons(4567), sin_addr=inet_addr("xxx.xxx.xxx.xxx")}, 16) = 44 as non-root, it uses "connect()": connect(3, {sa_family=AF_INET, sin_port=htons(4567), sin_addr=inet_addr("xxx.xxx.xxx.xxx")}, 16) = -1 EINPROGRESS (Operation now in progress) (I don't know that it's the connection to port 4567 that is the culprit; just used those lines from strace output as examples). MySQL dies like so: terminate called after throwing an instance of 'boost::exception_detail::clone_impl<boost::exception_detail::error_info_injector<asio::system_error> >' what(): Transport endpoint is not connected 22:47:10 UTC - mysqld got signal 6 ; This could be because you hit a bug. It is also possible that this binary or one of the libraries it was linked against is corrupt, improperly built, or misconfigured. This error can also be caused by malfunctioning hardware. We will try our best to scrape up some info that will hopefully help diagnose the problem, but since we have already crashed, something is definitely wrong and this may fail. Please help us make Percona Server better by reporting any bugs at http://bugs.percona.com/ key_buffer_size=8388608 read_buffer_size=131072 max_used_connections=11 max_threads=2002 thread_count=9 connection_count=9 It is possible that mysqld could use up to key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 4389869 K bytes of memory Hope that's ok; if not, decrease some variables in the equation. Thread pointer: 0x0 Attempting backtrace. You can use the following information to find out where mysqld died. If you see no messages after this, something went terribly wrong... stack_bottom = 0 thread_stack 0x40000 /usr/sbin/mysqld(my_print_stacktrace+0x35)[0x7d0765] /usr/sbin/mysqld(handle_fatal_signal+0x4b4)[0x6a9c64] /lib64/libpthread.so.0(+0xf520)[0x7f0ddfe05520] /lib64/libc.so.6(gsignal+0x35)[0x7f0dde9dba45] /lib64/libc.so.6(abort+0x175)[0x7f0dde9dd225] /usr/lib64/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x12d)[0x7f0ddc13ca7d] /usr/lib64/libstdc++.so.6(+0xbcc06)[0x7f0ddc13ac06] /usr/lib64/libstdc++.so.6(+0xbcc33)[0x7f0ddc13ac33] /usr/lib64/libstdc++.so.6(+0xbcd2e)[0x7f0ddc13ad2e] /usr/lib64/libgalera_smm.so(_ZN5boost15throw_exceptionIN4asio12system_errorEEEvRKT_+0x18a)[0x7f0ddc4a93ca] /usr/lib64/libgalera_smm.so(_ZN4asio6detail11throw_errorERKNS_10error_codeE+0x5b)[0x7f0ddc4a94eb] /usr/lib64/libgalera_smm.so(_ZNK4asio12basic_socketINS_2ip3tcpENS_21stream_socket_serviceIS2_EEE15remote_endpointEv+0xc1)[0x7f0ddc4a9671] /usr/lib64/libgalera_smm.so(_ZN5gcomm13AsioTcpSocket18assign_remote_addrEv+0x5e7)[0x7f0ddc49a657] /usr/lib64/libgalera_smm.so(_ZN5gcomm15AsioTcpAcceptor14accept_handlerEN5boost10shared_ptrINS_6SocketEEERKN4asio10error_codeE+0xc4)[0x7f0ddc49b0e4] /usr/lib64/libgalera_smm.so(_ZN4asio6detail25reactive_socket_accept_opINS_12basic_socketINS_2ip3tcpENS_21stream_socket_serviceIS4_EEEES4_N5boost3_bi6bind_tIvNS8_4_mfi3mf2IvN5gcomm15AsioTcpAcceptorENS8_10shared_ptrINSD_6SocketEEERKNS_10error_codeEEENS9_5list3INS9_5valueIPSE_EENSN_ISH_EEPFNS8_3argILi1EEEvEEEEEE11do_completeEPNS0_15task_io_serviceEPNS0_25task_io_service_operationESI_m+0x180)[0x7f0ddc4a4eb0] /usr/lib64/libgalera_smm.so(_ZN4asio6detail15task_io_service3runERNS_10error_codeE+0x459)[0x7f0ddc4c68c9] /usr/lib64/libgalera_smm.so(_ZN5gcomm12AsioProtonet10event_loopERKN2gu8datetime6PeriodE+0x1d6)[0x7f0ddc4be816] /usr/lib64/libgalera_smm.so(_ZN9GCommConn3runEv+0x57)[0x7f0ddc4d8777] /usr/lib64/libgalera_smm.so(_ZN9GCommConn6run_fnEPv+0x9)[0x7f0ddc4dd469] /lib64/libpthread.so.0(+0x77e1)[0x7f0ddfdfd7e1] /lib64/libc.so.6(clone+0x6d)[0x7f0ddea8f8ed] You may download the Percona Server operations manual by visiting http://www.percona.com/software/percona-server/. You may find information in the manual which will help you identify the cause of the crash. 130524 15:47:10 mysqld_safe Number of processes running now: 0 130524 15:47:10 mysqld_safe WSREP: not restarting wsrep node automatically 130524 15:47:10 mysqld_safe mysqld from pid file /mnt/ssd/mysql/xxx.pid ended I saw this discussion of a very similar problem on the "Percona discussions" google group, but I'm sure an actual bug was ever submitted - a search on this site didn't find anything, but I apologize if this ends up being a duplicate. https://groups.google.com/forum/?fromgroups#!topic/percona-discussion/gUWvXOKR_88 Thanks! Basic info: # uname -a Linux 2.6.32-235.el6.x86_64 #1 SMP Fri Feb 17 11:48:53 EST 2012 x86_64 x86_64 x86_64 GNU/Linux # rpm -qa | grep -i percona percona-xtrabackup-2.0.7-552.rhel6.x86_64 Percona-XtraDB-Cluster-shared-5.5.30-23.7.4.406.rhel6.x86_64 percona-toolkit-2.1.4-1.noarch Percona-XtraDB-Cluster-client-5.5.30-23.7.4.406.rhel6.x86_64 Percona-Server-shared-compat-5.5.30-rel30.2.508.rhel6.x86_64 Percona-XtraDB-Cluster-server-5.5.30-23.7.4.406.rhel6.x86_64 Percona-XtraDB-Cluster-galera-2.5-1.150.rhel6.x86_64 I can quite reliably crash MySQL by running 'nmap' against the server running it, but only as a non-root user. If I run nmap as root, all's well. I think the difference lies in how nmap scans ports when run as root vs. non-root. Some strace output: as root, it uses "sendto()": sendto(3, "E\0\0,\260x\0\0(\6\211#\212H\204\320\212H\277\317\364v\21\327\261\"?\313\0\0\0\0"..., 44, 0, {sa_family=AF_INET, sin_port=htons(4567), sin_addr=inet_addr("xxx.xxx.xxx.xxx")}, 16) = 44 as non-root, it uses "connect()": connect(3, {sa_family=AF_INET, sin_port=htons(4567), sin_addr=inet_addr("xxx.xxx.xxx.xxx")}, 16) = -1 EINPROGRESS (Operation now in progress) (I don't know that it's the connection to port 4567 that is the culprit; just used those lines from strace output as examples). MySQL dies like so: terminate called after throwing an instance of 'boost::exception_detail::clone_impl<boost::exception_detail::error_info_injector<asio::system_error> >'   what(): Transport endpoint is not connected 22:47:10 UTC - mysqld got signal 6 ; This could be because you hit a bug. It is also possible that this binary or one of the libraries it was linked against is corrupt, improperly built, or misconfigured. This error can also be caused by malfunctioning hardware. We will try our best to scrape up some info that will hopefully help diagnose the problem, but since we have already crashed, something is definitely wrong and this may fail. Please help us make Percona Server better by reporting any bugs at http://bugs.percona.com/ key_buffer_size=8388608 read_buffer_size=131072 max_used_connections=11 max_threads=2002 thread_count=9 connection_count=9 It is possible that mysqld could use up to key_buffer_size + (read_buffer_size + sort_buffer_size)*max_threads = 4389869 K bytes of memory Hope that's ok; if not, decrease some variables in the equation. Thread pointer: 0x0 Attempting backtrace. You can use the following information to find out where mysqld died. If you see no messages after this, something went terribly wrong... stack_bottom = 0 thread_stack 0x40000 /usr/sbin/mysqld(my_print_stacktrace+0x35)[0x7d0765] /usr/sbin/mysqld(handle_fatal_signal+0x4b4)[0x6a9c64] /lib64/libpthread.so.0(+0xf520)[0x7f0ddfe05520] /lib64/libc.so.6(gsignal+0x35)[0x7f0dde9dba45] /lib64/libc.so.6(abort+0x175)[0x7f0dde9dd225] /usr/lib64/libstdc++.so.6(_ZN9__gnu_cxx27__verbose_terminate_handlerEv+0x12d)[0x7f0ddc13ca7d] /usr/lib64/libstdc++.so.6(+0xbcc06)[0x7f0ddc13ac06] /usr/lib64/libstdc++.so.6(+0xbcc33)[0x7f0ddc13ac33] /usr/lib64/libstdc++.so.6(+0xbcd2e)[0x7f0ddc13ad2e] /usr/lib64/libgalera_smm.so(_ZN5boost15throw_exceptionIN4asio12system_errorEEEvRKT_+0x18a)[0x7f0ddc4a93ca] /usr/lib64/libgalera_smm.so(_ZN4asio6detail11throw_errorERKNS_10error_codeE+0x5b)[0x7f0ddc4a94eb] /usr/lib64/libgalera_smm.so(_ZNK4asio12basic_socketINS_2ip3tcpENS_21stream_socket_serviceIS2_EEE15remote_endpointEv+0xc1)[0x7f0ddc4a9671] /usr/lib64/libgalera_smm.so(_ZN5gcomm13AsioTcpSocket18assign_remote_addrEv+0x5e7)[0x7f0ddc49a657] /usr/lib64/libgalera_smm.so(_ZN5gcomm15AsioTcpAcceptor14accept_handlerEN5boost10shared_ptrINS_6SocketEEERKN4asio10error_codeE+0xc4)[0x7f0ddc49b0e4] /usr/lib64/libgalera_smm.so(_ZN4asio6detail25reactive_socket_accept_opINS_12basic_socketINS_2ip3tcpENS_21stream_socket_serviceIS4_EEEES4_N5boost3_bi6bind_tIvNS8_4_mfi3mf2IvN5gcomm15AsioTcpAcceptorENS8_10shared_ptrINSD_6SocketEEERKNS_10error_codeEEENS9_5list3INS9_5valueIPSE_EENSN_ISH_EEPFNS8_3argILi1EEEvEEEEEE11do_completeEPNS0_15task_io_serviceEPNS0_25task_io_service_operationESI_m+0x180)[0x7f0ddc4a4eb0] /usr/lib64/libgalera_smm.so(_ZN4asio6detail15task_io_service3runERNS_10error_codeE+0x459)[0x7f0ddc4c68c9] /usr/lib64/libgalera_smm.so(_ZN5gcomm12AsioProtonet10event_loopERKN2gu8datetime6PeriodE+0x1d6)[0x7f0ddc4be816] /usr/lib64/libgalera_smm.so(_ZN9GCommConn3runEv+0x57)[0x7f0ddc4d8777] /usr/lib64/libgalera_smm.so(_ZN9GCommConn6run_fnEPv+0x9)[0x7f0ddc4dd469] /lib64/libpthread.so.0(+0x77e1)[0x7f0ddfdfd7e1] /lib64/libc.so.6(clone+0x6d)[0x7f0ddea8f8ed] You may download the Percona Server operations manual by visiting http://www.percona.com/software/percona-server/. You may find information in the manual which will help you identify the cause of the crash. 130524 15:47:10 mysqld_safe Number of processes running now: 0 130524 15:47:10 mysqld_safe WSREP: not restarting wsrep node automatically 130524 15:47:10 mysqld_safe mysqld from pid file /mnt/ssd/mysql/xxx.pid ended I saw this discussion of a very similar problem on the "Percona discussions" google group, but I'm not sure an actual bug was ever submitted - a search on this site didn't find anything, but I apologize if this ends up being a duplicate. https://groups.google.com/forum/?fromgroups#!topic/percona-discussion/gUWvXOKR_88 Thanks!
2013-05-25 10:35:08 Raghavendra D Prabhu affects percona-server percona-xtradb-cluster
2013-05-25 10:45:55 Raghavendra D Prabhu percona-xtradb-cluster: status New Confirmed
2013-05-28 20:42:15 Laurent Minost bug added subscriber Laurent Minost
2013-06-01 14:23:46 Alex Yurchenko bug task added galera
2013-06-01 14:24:18 Alex Yurchenko galera: importance Undecided High
2013-06-01 14:24:18 Alex Yurchenko galera: status New Confirmed
2013-06-01 14:24:18 Alex Yurchenko galera: milestone 23.2.6
2013-06-01 14:24:18 Alex Yurchenko galera: assignee Teemu Ollakka (teemu-ollakka)
2013-06-02 20:07:28 Raghavendra D Prabhu percona-xtradb-cluster: milestone 5.5.31-24.8
2013-06-04 12:12:40 Teemu Ollakka galera: status Confirmed In Progress
2013-06-13 12:10:32 Alex Yurchenko galera: status In Progress Fix Committed
2013-06-13 21:38:10 Raghavendra D Prabhu percona-xtradb-cluster: status Confirmed Fix Released
2013-06-28 21:35:28 Alex Yurchenko galera: status Fix Committed Fix Released