After compiling/installing Percona Server 5.6.26 from source in Ubuntu 14.04 tried to enable TokuDB engine , but failed with assert + abandoned tokudb files in datadir.
Here is description:
1. Unpacked source archive to:
/home/sh/Sandboxes/percona-server-5.6.26-74.0
2. CMAKE command:
cmake -DCMAKE_INSTALL_PREFIX=/opt/percona-5.6.26 -DMYSQL_DATADIR=/opt/percona-5.6.26/datadir -DSYSCONFDIR=/opt/ -DWITH_SSL=system -DMYSQL_TCP_PORT=3307 -DMYSQL_UNIX_ADDR=/opt/percona-5.6.26/mysqld.sock -DDEFAULT_CHARSET=utf8 -DDEFAULT_COLLATION=utf8_general_ci -DWITH_DEBUG=1 -DCOMPILATION_COMMENT="Shahriyar Rzayev's Percona Server" -DOPTIMIZER_TRACE=1 -DWITH_ZLIB=system -DWITH_VALGRIND=1 -DCMAKE_C_FLAGS=-DHAVE_purify -DCMAKE_CXX_FLAGS=-DHAVE_purify
3. make + make install as well.
4. Installing system tables:
cd /opt/percona-5.6.26/scripts
sh@shrzayev:/opt/percona-5.6.26/scripts$ sudo ./mysql_install_db --no-defaults --basedir=/opt/percona-5.6.26 --user=root --datadir=/opt/percona-5.6.26/datadir
5. Starting Percona Server as:
sh@shrzayev:/opt/percona-5.6.26$ sudo /opt/percona-5.6.26/bin/mysqld_safe --defaults-file=/opt/percona-5.6.26/my.cnf --user=mysql --datadir=/opt/percona-5.6.26/datadir --socket=/opt/percona-5.6.26/datadir/mysqld-new.sock --pid-file=/opt/percona-5.6.26/datadir/mysqld-new.pid --port=3307 --log-error=/opt/percona-5.6.26/datadir/error.err
6. Successfully connected:
sh@shrzayev:~$ /opt/percona-5.6.26/bin/mysql -u root -p12345 -S /opt/percona-5.6.26/datadir/mysqld-new.sock
Warning: Using a password on the command line interface can be insecure.
Welcome to the MySQL monitor. Commands end with ; or \g.
Your MySQL connection id is 2
Server version: 5.6.26-74.0-debug Shahriyar Rzayev's Percona Server
Copyright (c) 2009-2015 Percona LLC and/or its affiliates
Copyright (c) 2000, 2015, Oracle and/or its affiliates. All rights reserved.
7. Trying to enable TokuDB engine using ps_tokudb_admin:
sh@shrzayev:~$ sudo /opt/percona-5.6.26/bin/ps_tokudb_admin --enable --user=root -p12345 -S /opt/percona-5.6.26/datadir/mysqld-new.sock
[sudo] password for sh:
Checking if Percona Server is running with jemalloc enabled...
INFO: Percona Server is running with jemalloc enabled.
Checking transparent huge pages status on the system...
INFO: Transparent huge pages are currently disabled on the system.
Checking if thp-setting=never option is already set in config file...
INFO: Option thp-setting=never is not set in the config file.
(needed only if THP is not disabled permanently on the system)
Checking TokuDB engine plugin status...
INFO: TokuDB engine plugin is not installed.
Adding thp-setting=never option into /etc/my.cnf
INFO: Successfully added thp-setting=never option into /etc/my.cnf
Installing TokuDB engine...
ERROR: Failed to install TokuDB engine plugin. Please check error log.
Output from error log:
Version: '5.6.26-74.0-debug' socket: '/opt/percona-5.6.26/datadir/mysqld-new.sock' port: 3307 Shahriyar Rzayev's Percona Server
/home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/portability/toku_pthread.h:114 toku_mutex_init: Assertion `!mutex->valid
' failed (errno=2)
: No such file or directory
Backtrace: (Note: toku_do_assert=0x0x7efdf256c720)
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(db_env_do_backtrace(_IO_FILE*)+0x26)[0x7efdf256c28a]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(+0x19e467)[0x7efdf256c467]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(toku_do_assert_zero_fail(unsigned long, char const*, char const*, char const*, int, int)+0x0)
[0x7efdf256c56a]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(+0x115e5c)[0x7efdf24e3e5c]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(+0x117322)[0x7efdf24e5322]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(toku_txn_begin_with_xid(tokutxn*, tokutxn**, tokulogger*, txnid_pair_s, __TXN_SNAPSHOT_TYPE,
__toku_db_txn*, bool, bool)+0xf2)[0x7efdf24e4e1c]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(toku_txn_begin(__toku_db_env*, __toku_db_txn*, __toku_db_txn**, unsigned int)+0x4a0)[0x7efdf2
52f92b]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(+0x9fc8d)[0x7efdf246dc8d]
/opt/percona-5.6.26/lib/mysql/plugin/ha_tokudb.so(+0x917f9)[0x7efdf245f7f9]
/opt/percona-5.6.26/bin/mysqld(ha_initialize_handlerton(st_plugin_int*)+0xea)[0x6464b2]
/opt/percona-5.6.26/bin/mysqld[0x8129bb]
/opt/percona-5.6.26/bin/mysqld(mysql_install_plugin(THD*, st_mysql_lex_string const*, st_mysql_lex_string const*)+0x3a3)[0x814bb6]
/opt/percona-5.6.26/bin/mysqld(mysql_execute_command(THD*)+0x7e28)[0x80607a]
/opt/percona-5.6.26/bin/mysqld(mysql_parse(THD*, char*, unsigned int, Parser_state*)+0x5a5)[0x809ca2]
/opt/percona-5.6.26/bin/mysqld(dispatch_command(enum_server_command, THD*, char*, unsigned int)+0xd54)[0x7fb611]
/opt/percona-5.6.26/bin/mysqld(do_command(THD*)+0x3bb)[0x7fa448]
/opt/percona-5.6.26/bin/mysqld(do_handle_one_connection(THD*)+0x25b)[0x7bdf06]
/opt/percona-5.6.26/bin/mysqld(handle_one_connection+0x33)[0x7bd977]
/opt/percona-5.6.26/bin/mysqld(pfs_spawn_thread+0x159)[0xe5032b]
/lib/x86_64-linux-gnu/libpthread.so.0(+0x8182)[0x7efe29229182]
/lib/x86_64-linux-gnu/libc.so.6(clone+0x6d)[0x7efe2873647d]
Output from gdb:
(gdb) bt
#0 0x00007efe2922e621 in __pthread_kill (threadid=<optimized out>, signo=6) at ../nptl/sysdeps/unix/sysv/linux/pthread_kill.c:61
#1 0x0000000000b0bfed in my_write_core (sig=6) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/mysys/stacktrace.c:422
#2 0x000000000073ff27 in handle_fatal_signal (sig=6) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/signal_handler.cc:236
#3 <signal handler called>
#4 0x00007efe28672cc9 in __GI_raise (sig=sig@entry=6) at ../nptl/sysdeps/unix/sysv/linux/raise.c:56
#5 0x00007efe286760d8 in __GI_abort () at abort.c:89
#6 0x00007efdf256c46c in toku_do_backtrace_abort ()
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/portability/toku_assert.cc:147
#7 0x00007efdf256c56a in toku_do_assert_fail (expr_as_string=0x7efdf2585484 "!mutex->valid",
function=0x7efdf2585d00 <_ZZL15toku_mutex_initP10toku_mutexPK19pthread_mutexattr_tE12__FUNCTION__> "toku_mutex_init",
file=0x7efdf2585420 "/home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/portability/toku_pthread.h", line=114,
caller_errno=2) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/portability/toku_assert.cc:168
#8 0x00007efdf24e3e5c in toku_mutex_init (mutex=0x7efdf2caf6e8, attr=0x0)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/portability/toku_pthread.h:114
#9 0x00007efdf24e5322 in toku_txn_create_txn (tokutxn=0x7efe2a6b60b8, parent_tokutxn=0x0, logger=0x7efdf2cc21c0,
snapshot_type=TXN_SNAPSHOT_NONE, container_db_txn=0x7efdf2ce0000, for_recovery=false, read_only=false)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/ft/txn/txn.cc:273
#10 0x00007efdf24e4e1c in toku_txn_begin_with_xid (parent=0x0, txnp=0x7efdf2ce0090, logger=0x7efdf2cc21c0, xid=...,
snapshot_type=TXN_SNAPSHOT_NONE, container_db_txn=0x7efdf2ce0000, for_recovery=false, read_only=false)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/ft/txn/txn.cc:141
#11 0x00007efdf252f92b in toku_txn_begin (env=0x7efdf2caf080, stxn=0x0, txn=0x7efe2a6b61a0, flags=0)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/src/ydb_txn.cc:577
#12 0x00007efdf246dc8d in env_open (env=0x7efdf2caf080, home=0x18738c0 <mysql_real_data_home> "/opt/percona-5.6.26/datadir/", flags=11403457,
mode=438) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/PerconaFT/src/ydb.cc:951
#13 0x00007efdf245f7f9 in tokudb_init_func (p=0x7efdf2c22180)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/tokudb/hatoku_hton.cc:501
#14 0x00000000006464b2 in ha_initialize_handlerton (plugin=0x7efdf2c203f0) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/handler.cc:696
#15 0x00000000008129bb in plugin_initialize (plugin=0x7efdf2c203f0) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_plugin.cc:1137
#16 0x0000000000814bb6 in mysql_install_plugin (thd=0x7efdfb751000, name=0x7efdfb753db0, dl=0x7efdfb753dc0)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_plugin.cc:1909
#17 0x000000000080607a in mysql_execute_command (thd=0x7efdfb751000) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_parse.cc:5423
#18 0x0000000000809ca2 in mysql_parse (thd=0x7efdfb751000, rawbuf=0x7efdf2c20030 "INSTALL PLUGIN tokudb SONAME 'ha_tokudb.so'", length=43,
parser_state=0x7efe2a6b8170) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_parse.cc:6972
#19 0x00000000007fb611 in dispatch_command (command=COM_QUERY, thd=0x7efdfb751000,
packet=0x7efdfb755001 "INSTALL PLUGIN tokudb SONAME 'ha_tokudb.so'", packet_length=43)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_parse.cc:1442
#20 0x00000000007fa448 in do_command (thd=0x7efdfb751000) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_parse.cc:1054
#21 0x00000000007bdf06 in do_handle_one_connection (thd_arg=0x7efe027e8000)
---Type <return> to continue, or q <return> to quit---
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_connect.cc:1541
#22 0x00000000007bd977 in handle_one_connection (arg=0x7efe027e8000) at /home/sh/Sandboxes/percona-server-5.6.26-74.0/sql/sql_connect.cc:1444
#23 0x0000000000e5032b in pfs_spawn_thread (arg=0x7efdfb711b60)
at /home/sh/Sandboxes/percona-server-5.6.26-74.0/storage/perfschema/pfs.cc:1860
#24 0x00007efe29229182 in start_thread (arg=0x7efe2a6b9700) at pthread_create.c:312
#25 0x00007efe2873647d in clone () at ../sysdeps/unix/sysv/linux/x86_64/clone.S:111
Also if you list datadir there will be tokudb related files:
sh@shrzayev:~$ ls /opt/percona-5.6.26/datadir/ | grep toku
log000000000000.tokulog28
__tokudb_lock_dont_delete_me_data
__tokudb_lock_dont_delete_me_environment
__tokudb_lock_dont_delete_me_logs
__tokudb_lock_dont_delete_me_recovery
__tokudb_lock_dont_delete_me_temp
tokudb.rollback
But plugin is not activated:
mysql> select plugin_name, plugin_status from information_schema.plugins where plugin_name like '%toku%';
Empty set (0.00 sec)
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