I have just upgraded to weekly.2012-02-07 and tried a test of my packages (under development) and I get a test failure with the following report:
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FAIL: gff_test.go:86: gff.(*S).TestReadGFF
gff_test.go:108:
c.Check(*obtain[j], check.Equals, expect[j])
... obtained feat.Feature = feat.Feature{ID:"SEQ1:102..105", Source:"EMBL", Location:"SEQ1", Start:102, End:105, Feature:"atg", Score:NaN, Probability:0, Attributes:"", Comments:"", Frame:0, Strand:1, Moltype:0, Meta:interface {}(nil)}
... expected feat.Feature = feat.Feature{ID:"SEQ1:102..105", Source:"EMBL", Location:"SEQ1", Start:102, End:105, Feature:"atg", Score:NaN, Probability:0, Attributes:"", Comments:"", Frame:0, Strand:1, Moltype:0, Meta:interface {}(nil)}
gff_test.go:108:
c.Check(*obtain[j], check.Equals, expect[j])
... obtained feat.Feature = feat.Feature{ID:"SEQ1:102..172", Source:"EMBL", Location:"SEQ1", Start:102, End:172, Feature:"exon", Score:NaN, Probability:0, Attributes:"", Comments:"", Frame:0, Strand:1, Moltype:0, Meta:interface {}(nil)}
... expected feat.Feature = feat.Feature{ID:"SEQ1:102..172", Source:"EMBL", Location:"SEQ1", Start:102, End:172, Feature:"exon", Score:NaN, Probability:0, Attributes:"", Comments:"", Frame:0, Strand:1, Moltype:0, Meta:interface {}(nil)}
gff_test.go:108:
c.Check(*obtain[j], check.Equals, expect[j])
... obtained feat.Feature = feat.Feature{ID:"SEQ1:171..173", Source:"EMBL", Location:"SEQ1", Start:171, End:173, Feature:"splice5", Score:NaN, Probability:0, Attributes:"", Comments:"", Frame:-1, Strand:1, Moltype:0, Meta:interface {}(nil)}
... expected feat.Feature = feat.Feature{ID:"SEQ1:171..173", Source:"EMBL", Location:"SEQ1", Start:171, End:173, Feature:"splice5", Score:NaN, Probability:0, Attributes:"", Comments:"", Frame:-1, Strand:1, Moltype:0, Meta:interface {}(nil)}
OOPS: 3 passed, 1 FAILED
--- FAIL: Test (0.02 seconds)
This failure appears to be due to the NaN inequality as setting these values to 0 allows the test to pass.
A work around is to compare the structs as strings.
