In the Overview tab, the graph window fails to display, although the hierarchy and data table window will load. During the loading of the application, inexplicably, a pop-up notice appears reading "File Format Not Recognized" or some such. I try running with --reload plaform/modules/* but to no avail. Error output:
Exception in thread "main" java.lang.NoClassDefFoundError:
Caused by: java.lang.ClassNotFoundException:
at java.net.URLClassLoader$1.run(URLClassLoader.java:202)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:190)
at java.lang.ClassLoader.loadClass(ClassLoader.java:307)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:301)
at java.lang.ClassLoader.loadClass(ClassLoader.java:248)
Could not find the main class: . Program will exit.
tiodude@lengalenga:~/crawls/gephi-0.7-beta$ bin/gephi* --reload /platform/modules/*
java.io.FileNotFoundException: /platform/modules/* (No such file or directory)
at java.io.FileInputStream.open(Native Method)
at java.io.FileInputStream.<init>(FileInputStream.java:106)
at org.netbeans.Util.makeTempJar(Util.java:87)
at org.netbeans.StandardModule.ensurePhysicalJar(StandardModule.java:269)
at org.netbeans.StandardModule.loadManifest(StandardModule.java:295)
at org.netbeans.StandardModule.<init>(StandardModule.java:136)
at org.netbeans.ModuleFactory.create(ModuleFactory.java:69)
at org.netbeans.ModuleManager.create(ModuleManager.java:517)
at org.netbeans.core.startup.ModuleSystem.deployTestModule(ModuleSystem.java:357)
at org.netbeans.core.startup.TestModuleDeployer.deployTestModule(TestModuleDeployer.java:71)
at org.netbeans.core.startup.CLITestModuleReload.cli(CLITestModuleReload.java:80)
at org.netbeans.CLIHandler.notifyHandlers(CLIHandler.java:230)
at org.netbeans.CLIHandler$2.exec(CLIHandler.java:594)
at org.netbeans.CLIHandler.finishInitialization(CLIHandler.java:412)
at org.netbeans.MainImpl.finishInitialization(MainImpl.java:214)
at org.netbeans.Main.finishInitialization(Main.java:87)
at org.netbeans.core.startup.Main.start(Main.java:308)
at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:114)
at java.lang.Thread.run(Thread.java:619)
tiodude@lengalenga:~/crawls/gephi-0.7-beta$ bin/gephi* --reload platform/modules/*
java.io.FileNotFoundException: /home/tiodude/crawls/gephi-0.7-beta/platform/modules/ext (Is a directory)
at java.io.FileInputStream.open(Native Method)
at java.io.FileInputStream.<init>(FileInputStream.java:106)
at org.netbeans.Util.makeTempJar(Util.java:87)
at org.netbeans.StandardModule.ensurePhysicalJar(StandardModule.java:269)
at org.netbeans.StandardModule.loadManifest(StandardModule.java:295)
at org.netbeans.StandardModule.<init>(StandardModule.java:136)
at org.netbeans.ModuleFactory.create(ModuleFactory.java:69)
at org.netbeans.ModuleManager.create(ModuleManager.java:517)
at org.netbeans.core.startup.ModuleSystem.deployTestModule(ModuleSystem.java:357)
at org.netbeans.core.startup.TestModuleDeployer.deployTestModule(TestModuleDeployer.java:71)
at org.netbeans.core.startup.CLITestModuleReload.cli(CLITestModuleReload.java:80)
at org.netbeans.CLIHandler.notifyHandlers(CLIHandler.java:230)
at org.netbeans.CLIHandler$2.exec(CLIHandler.java:594)
at org.netbeans.CLIHandler.finishInitialization(CLIHandler.java:412)
at org.netbeans.MainImpl.finishInitialization(MainImpl.java:214)
at org.netbeans.Main.finishInitialization(Main.java:87)
at org.netbeans.core.startup.Main.start(Main.java:308)
at org.netbeans.core.startup.TopThreadGroup.run(TopThreadGroup.java:114)
at java.lang.Thread.run(Thread.java:619)
Failing to load the graph window is probably a graphic issue. What is your system? Do you have your graphic card driver up to date?
See also http:// gephi.org/ users/detect- and-fix- graphical- problems/
Running "--reload plaform/modules/*" is not something you can do, if you wanna reset parameters, you can simply delete the gephi user directory (see http:// wiki.gephi. org/index. php/Troubleshoo ting#Where_ are_user_ files.3F)