------------------------------------------------------------------------------- >Log Session: Monday, April 12, 2010 3:05:19 PM CEST >System Info: Product Version = Gephi 0.7 alpha3 200912041610 Operating System = Linux version 2.6.31-20-generic running on amd64 Java; VM; Vendor = 1.6.0_15; Java HotSpot(TM) 64-Bit Server VM 14.1-b02; Sun Microsystems Inc. Runtime = Java(TM) SE Runtime Environment 1.6.0_15-b03 Java Home = /usr/lib/jvm/java-6-sun-1.6.0.15/jre System Locale; Encoding = en_US (gephidesktop); UTF-8 Home Directory = /home/gephiuser Current Directory = /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/bin User Directory = /home/gephiuser/.gephidesktop/dev Installation = /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/gephidesktop /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11 Boot & Ext. Classpath = /usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/resources.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/rt.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/sunrsasign.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/jsse.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/jce.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/charsets.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/classes:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/ext/dnsns.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/ext/sunpkcs11.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/ext/localedata.jar:/usr/lib/jvm/java-6-sun-1.6.0.15/jre/lib/ext/sunjce_provider.jar Application Classpath = /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/lib/boot.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/lib/org-openide-modules.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/lib/org-openide-util.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/lib/locale/org-openide-util_ja.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/lib/locale/org-openide-util_pt_BR.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/lib/locale/org-openide-util_zh_CN.jar:/usr/lib/jvm/java-6-sun/lib/dt.jar:/usr/lib/jvm/java-6-sun/lib/tools.jar Startup Classpath = /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/core/core.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11/core/org-openide-filesystems.jar:/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/bin/./../gephidesktop/core/locale/core_gephidesktop.jar ------------------------------------------------------------------------------- WARNING [org.netbeans.core.startup.NbEvents]: The extension /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/gephidesktop/modules/ext/beansbinding-1.2.1.jar may be multiply loaded by modules: [/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/gephidesktop/modules/org-gephi-ui-utils.jar, /home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/gephidesktop/modules/org-gephi-desktop-tools.jar]; see: http://www.netbeans.org/download/dev/javadoc/org-openide-modules/org/openide/modules/doc-files/classpath.html#class-path WARNING [org.openide.filesystems.Ordering]: Not all children in Services/MIMEResolver/ marked with the position attribute: [GephiResolver.xml], but some are: [instance-mime-resolver.xml] WARNING [org.openide.filesystems.Ordering]: Not all children in Services/MIMEResolver/ marked with the position attribute: [GephiResolver.xml], but some are: [instance-mime-resolver.xml] Loading native libraries INFO [org.netbeans.core.startup.NbEvents]: Turning on modules: org.openide.util [7.31.2.1 1 201001291424] org.openide.modules [7.13.1 200912041610] org.openide.awt [7.19.1.1 200912041610] org.netbeans.libs.junit4 [1.7.1 200912041610] org.netbeans.api.progress/1 [1.16.1.1 1 200912041610] org.gephi.utils.longtask [0.7.0.1 100331] org.openide.filesystems [7.32.1.1.1 1 200912041610] org.jdesktop.swingx [1.6 100331] org.gephi.ui.utils [0.7 100331] org.gephi.desktop.mrufiles.api [0.7 100331] org.jdesktop.layout/1 [1.10.1.103 103 200912041610] org.openide.dialogs [7.13.1 200912041610] org.openide.nodes [7.12.1.1 200912041610] org.openide.windows [6.30.1 200912041610] org.netbeans.modules.editor.mimelookup/1 [1.14.1 200912041610] org.openide.text [6.27.1 200912041610] org.netbeans.swing.outline [1.7.1 200912041610] org.openide.explorer [6.22.2.1 1 201001291424] org.openide.actions [6.12.1.1 200912041610] org.netbeans.modules.queries/1 [1.17.1 200912041610] org.openide.loaders [7.10.1 200912041610] org.gephi.project.api [0.7.0.3 100331] org.gephi.graph.api [0.7.0.2 100331] org.gephi.tools.api [0.7 100331] org.netbeans.bootstrap/1 [2.22.1 200912041610] org.netbeans.core.startup/1 [1.19.1.1 200912041610] org.netbeans.spi.quicksearch [1.4.1 200912041610] org.openide.io [1.20.1 200912041610] org.netbeans.swing.plaf [1.12.1 200912041610] org.netbeans.core/2 [3.14.1.1 200912041610] org.netbeans.modules.options.api/1 [1.16.2 201001291424] org.gephi.lib.gleem [1.0 100331] org.gephi.lib.jogl [1.1.0.1 100331] org.gephi.data.attributes.api [0.7 100331] org.gephi.utils.collection [0.7 100331] org.gephi.ui.components [0.7 100331] org.gephi.lib.validation [0.4 100330] org.gephi.visualization [0.7.0.7 100331] org.gephi.desktop.hierarchy [0.7.0.1 100331] org.jfree [1.0 100331] org.gephi.statistics.api [0.7 100331] org.gephi.statistics.plugin [0.7.0.1 100331] org.netbeans.modules.masterfs/2 [2.20.1 200912041610] org.netbeans.core.io.ui/1 [1.4.1.1 1 200912041610] org.netbeans.libs.jna/1 [1.5.1 200912041610] org.netbeans.modules.settings/1 [1.22.1.1 200912041610] org.netbeans.swing.tabcontrol [1.19.1 200912041610] org.netbeans.core.windows/2 [2.17.1.1 200912041610] org.netbeans.core.nativeaccess/1 [1.5.1 200912041610] org.netbeans.modules.autoupdate.services [1.16.2 201003241801] org.netbeans.modules.javahelp/1 [2.15.1 200912041610] org.gephi.io.database.drivers [0.7 100331] org.gephi.io.importer.api [0.7.0.4 100331] org.netbeans.modules.sendopts/2 [2.7.1 200912041610] org.gephi.branding.desktop [0.7.0.6 100331] org.gephi.algorithms [0.7 100331] org.gephi.ui.components.SplineEditor [0.7 100331] org.gephi.desktop.tools [0.7.0.1 100331] org.gephi.ranking.api [0.7 100331] org.gephi.desktop.ranking [0.7.0.1 100331] org.gephi.clustering.api [0.7 100331] org.gephi.filters.api [0.7 100331] org.gephi.desktop.filters [0.7.0.4 100331] org.gephi.partition.api [0.7.0.2 100331] org.gephi.graph.dhns [0.7.0.4 100331] org.gephi.lib.processing [1.0.9 100331] org.gephi.io.exporter.api [0.7 100331] org.gephi.desktop.io.export [0.7.0.3 100331] org.gephi.preview.api [0.7.0.2 100331] org.gephi.desktop.preview [0.7.0.2 100331] org.gephi.layout.api [0.7 100331] org.gephi.timeline [0.7.0.1 100331] org.joda.time [1.0 100330] org.netbeans.modules.progress.ui [1.6.1.1 200912041610] org.gephi.desktop.context [0.7.0.1 100331] org.gephi.tools.plugin [0.7 100331] org.gephi.io.generator.api [0.7 100331] org.gephi.desktop.generate [0.7 100331] org.netbeans.swing.dirchooser [1.0 100331] org.netbeans.modules.print [7.3.1 200912041610] org.gephi.ui.statistics.plugin [0.7.0.2 100331] org.gephi.desktop.clustering [0.7 100331] org.gephi.desktop.layout [0.7.0.1 100331] org.gephi.lib.batik [1.7 100330] org.gephi.io.exporter.preview [0.7 100331] org.netbeans.modules.autoupdate.ui [1.14.1 200912041610] org.netbeans.core.ui/1 [1.19.2.1 201001291424] org.gephi.io.importer.plugin [0.7.0.6 100331] org.gephi.ui.propertyeditor [0.7 100331] org.gephi.layout.plugin [0.7 100331] org.gephi.filters.plugin [0.7.0.2 100331] org.gephi.ui.ranking.plugin [0.7 100331] org.gephi.ui.filters.plugin [0.7 100331] org.gephi.clustering.plugin [0.7 100331] org.gephi.desktop.statistics [0.7 100331] org.gephi.desktop.welcome [0.7 100331] org.gephi.ui.project [0.7 100331] org.gephi.ui.datatable [0.7 100331] org.gephi.ui.workspace [0.7 100331] org.gephi.desktop.timeline [0.7.0.1 100331] org.gephi.io.exporter.plugin [0.7.0.1 100331] org.gephi.desktop.partition [0.7.0.1 100331] org.netbeans.modules.editor.mimelookup.impl/1 [1.7.1 200912041610] org.gephi.io.generator.plugin [0.7 100331] org.gephi.desktop.importer [0.7.0.6 100331] org.gephi.ui.exporter.plugin [0.7.0.1 100331] org.gephi.ui.generator.plugin [0.7 100331] org.gephi.ui.timeline.plugin [0.7.0.1 100331] org.gephi.partition.plugin [0.7 100331] org.gephi.preview [0.7.0.2 100331] org.gephi.io.processor.plugin [0.7.0.1 100331] org.netbeans.modules.favorites/1 [1.18.1 200912041610] org.gephi.metrics.MyMetric [1.0 100331] org.netbeans.modules.options.keymap [1.8.1 200912041610] org.gephi.data.attributes [0.7 100331] INFO [org.netbeans.core.windows.persistence]: [PersistenceManager.getTopComponentForID] Problem when deserializing TopComponent for tcID:'GraphTopComponent'. Reason: Error reading MultiFileObject@461979eb[Windows2Local/Components/GraphTopComponent.settings]: java.lang.reflect.InvocationTargetException Content: Method: getDefault Class: class org.gephi.visualization.component.GraphTopComponent Content: Method: getDefault Class: class org.gephi.visualization.component.GraphTopComponent Caused: java.lang.IllegalArgumentException: GLDrawableFactory.chooseGraphicsConfiguration() was not used when creating this Component at com.sun.opengl.impl.x11.X11GLDrawableFactory.getGLDrawable(X11GLDrawableFactory.java:238) at javax.media.opengl.GLCanvas.(GLCanvas.java:142) at javax.media.opengl.GLCanvas.(GLCanvas.java:90) at org.gephi.visualization.swing.GraphCanvas.(GraphCanvas.java:49) at org.gephi.visualization.config.VizCommander.createCanvas(VizCommander.java:33) at org.gephi.visualization.VizController.initInstances(VizController.java:111) at org.gephi.visualization.VizController.getInstance(VizController.java:67) at org.gephi.visualization.component.GraphTopComponent.(GraphTopComponent.java:62) at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210) Caused: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:670) Caused: java.io.IOException: Error reading MultiFileObject@461979eb[Windows2Local/Components/GraphTopComponent.settings] at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.createFromMethod(XMLSettingsSupport.java:678) at org.netbeans.modules.settings.convertors.XMLSettingsSupport$SettingsRecognizer.instanceCreate(XMLSettingsSupport.java:581) at org.netbeans.modules.settings.convertors.SerialDataConvertor$SettingsInstance.instanceCreate(SerialDataConvertor.java:420) at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentPersistentForID(PersistenceManager.java:530) at org.netbeans.core.windows.persistence.PersistenceManager.getTopComponentForID(PersistenceManager.java:640) at org.netbeans.core.windows.PersistenceHandler.getTopComponentForID(PersistenceHandler.java:457) at org.netbeans.core.windows.PersistenceHandler.initModeFromConfig(PersistenceHandler.java:418) at org.netbeans.core.windows.PersistenceHandler.load(PersistenceHandler.java:203) at org.netbeans.core.windows.WindowSystemImpl.load(WindowSystemImpl.java:77) at org.netbeans.core.NonGui$2.run(NonGui.java:177) at java.awt.event.InvocationEvent.dispatch(InvocationEvent.java:209) at java.awt.EventQueue.dispatchEvent(EventQueue.java:597) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) Content: ALL [null]: Method: getDefault ALL [null]: Class: class org.gephi.visualization.component.GraphTopComponent Diagnostic information Input arguments: -Djdk.home=/usr/lib/jvm/java-6-sun -Dnetbeans.system_http_proxy=DIRECT -Dnetbeans.system_http_non_proxy_hosts= -Dnetbeans.dirs=./../gephidesktop: -Dnetbeans.home=/home/gephiuser/Desktop/gephi/gephi-0.7-alpha3/platform11 -Xms64m -Xmx512m -XX:+HeapDumpOnOutOfMemoryError -XX:HeapDumpPath=/home/gephiuser/.gephidesktop/dev/var/log/heapdump.hprof Compiler: HotSpot 64-Bit Server Compiler Heap memory usage: initial 64.0MB maximum 455.1MB Non heap memory usage: initial 23.2MB maximum 132.0MB Garbage collector: PS Scavenge (Collections=3 Total time spent=0s) Garbage collector: PS MarkSweep (Collections=0 Total time spent=0s) Classes: loaded=4361 total loaded=4361 unloaded 0 INFO [org.netbeans.core.ui.warmup.DiagnosticTask]: Total memory 4,154,564,608 INFO [null]: Total physical memory 4,154,564,608 WARNING [org.openide.filesystems.Ordering]: Not all children in Menu/Window/ marked with the position attribute: [ClusteringAction.shadow, ContextAction.shadow, DataTableAction.shadow, FiltersAction.shadow, GraphAction.shadow, HierarchyAction.shadow, LayoutAction.shadow, PartitionAction.shadow, PreviewAction.shadow, PreviewSettingsAction.shadow, RankingAction.shadow, StatisticsAction.shadow, WelcomeAction.shadow], but some are: [Separator3.instance, CloseWindowAction.shadow, MaximizeWindowAction.shadow, org-netbeans-core-windows-actions-UndockAction.shadow, Separator4.instance, Separator4_1.instance, org-netbeans-core-windows-actions-ResetWindowsAction.shadow] WARNING [org.openide.filesystems.Ordering]: Not all children in Menu/Help/ marked with the position attribute: [master-help.xml], but some are: [Separator1.instance, org-netbeans-modules-autoupdate-ui-actions-CheckForUpdatesAction.shadow, org-netbeans-core-actions-AboutAction.shadow] SEVERE [global] java.lang.IllegalArgumentException: Node must be in the graph at org.gephi.graph.dhns.graph.AbstractGraphImpl.checkNode(AbstractGraphImpl.java:127) at org.gephi.graph.dhns.graph.HierarchicalGraphImpl.getParent(HierarchicalGraphImpl.java:230) at org.gephi.partition.impl.PartitionControllerImpl.group(PartitionControllerImpl.java:283) at org.gephi.desktop.partition.PartitionChooser$3.actionPerformed(PartitionChooser.java:213) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at org.jdesktop.swingx.JXHyperlink.fireActionPerformed(JXHyperlink.java:266) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:236) at java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:272) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) SEVERE [global] java.lang.IllegalArgumentException: Node must be in the graph at org.gephi.graph.dhns.graph.AbstractGraphImpl.checkNode(AbstractGraphImpl.java:127) at org.gephi.graph.dhns.graph.HierarchicalGraphImpl.getParent(HierarchicalGraphImpl.java:230) at org.gephi.partition.impl.PartitionControllerImpl.group(PartitionControllerImpl.java:283) at org.gephi.desktop.partition.PartitionChooser$3.actionPerformed(PartitionChooser.java:213) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at org.jdesktop.swingx.JXHyperlink.fireActionPerformed(JXHyperlink.java:266) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.plaf.basic.BasicButtonListener.mouseReleased(BasicButtonListener.java:236) at java.awt.AWTEventMulticaster.mouseReleased(AWTEventMulticaster.java:272) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) WARNING [org.gephi.visualization.component.GraphTopComponent]: Cannot find GraphTopComponent component. It will not be located properly in the window system. WARNING [org.netbeans.core.startup.layers.BinaryFS]: value = org.gephi.visualization.component.GraphTopComponent.findInstance from Actions/Window/org-gephi-visualization-component-GraphAction.instance java.lang.NullPointerException at org.gephi.visualization.component.VizBarController$LabelGroupBar.getToolbarComponents(VizBarController.java:418) at org.gephi.visualization.component.VizToolbar.(VizToolbar.java:43) at org.gephi.visualization.component.VizBarController.getToolbar(VizBarController.java:90) at org.gephi.visualization.component.GraphTopComponent.initCollapsePanel(GraphTopComponent.java:91) at org.gephi.visualization.component.GraphTopComponent.(GraphTopComponent.java:65) at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210) at org.gephi.visualization.component.GraphTopComponent.findInstance(GraphTopComponent.java:223) Caused: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.netbeans.core.startup.layers.BinaryFS$AttrImpl$MethodAndParams.invoke(BinaryFS.java:603) at org.netbeans.core.startup.layers.BinaryFS$AttrImpl.getValue(BinaryFS.java:536) at org.netbeans.core.startup.layers.BinaryFS$BFSBase.getAttribute(BinaryFS.java:382) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:793) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:840) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:793) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:726) at org.netbeans.core.startup.layers.BinaryFS$FileMap.get(BinaryFS.java:959) at org.openide.windows.OpenComponentAction.getTopComponent(OpenComponentAction.java:70) at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:76) at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:139) at org.netbeans.modules.openide.util.ActionsBridge.implPerformAction(ActionsBridge.java:83) at org.netbeans.modules.openide.util.ActionsBridge.doPerformAction(ActionsBridge.java:67) at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:142) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:357) at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1225) at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1266) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) SEVERE [global] java.lang.NullPointerException at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:77) at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:139) at org.netbeans.modules.openide.util.ActionsBridge.implPerformAction(ActionsBridge.java:83) at org.netbeans.modules.openide.util.ActionsBridge.doPerformAction(ActionsBridge.java:67) at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:142) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:357) at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1225) at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1266) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) WARNING [org.gephi.visualization.component.GraphTopComponent]: Cannot find GraphTopComponent component. It will not be located properly in the window system. WARNING [org.netbeans.core.startup.layers.BinaryFS]: value = org.gephi.visualization.component.GraphTopComponent.findInstance from Actions/Window/org-gephi-visualization-component-GraphAction.instance java.lang.NullPointerException at org.gephi.visualization.component.VizBarController$LabelGroupBar.getToolbarComponents(VizBarController.java:418) at org.gephi.visualization.component.VizToolbar.(VizToolbar.java:43) at org.gephi.visualization.component.VizBarController.getToolbar(VizBarController.java:90) at org.gephi.visualization.component.GraphTopComponent.initCollapsePanel(GraphTopComponent.java:91) at org.gephi.visualization.component.GraphTopComponent.(GraphTopComponent.java:65) at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210) at org.gephi.visualization.component.GraphTopComponent.findInstance(GraphTopComponent.java:223) Caused: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.netbeans.core.startup.layers.BinaryFS$AttrImpl$MethodAndParams.invoke(BinaryFS.java:603) at org.netbeans.core.startup.layers.BinaryFS$AttrImpl.getValue(BinaryFS.java:536) at org.netbeans.core.startup.layers.BinaryFS$BFSBase.getAttribute(BinaryFS.java:382) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:793) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:840) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:793) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:726) at org.netbeans.core.startup.layers.BinaryFS$FileMap.get(BinaryFS.java:959) at org.openide.windows.OpenComponentAction.getTopComponent(OpenComponentAction.java:70) at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:76) at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:139) at org.netbeans.modules.openide.util.ActionsBridge.implPerformAction(ActionsBridge.java:83) at org.netbeans.modules.openide.util.ActionsBridge.doPerformAction(ActionsBridge.java:67) at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:142) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:357) at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1225) at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1266) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) SEVERE [global] java.lang.NullPointerException at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:77) at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:139) at org.netbeans.modules.openide.util.ActionsBridge.implPerformAction(ActionsBridge.java:83) at org.netbeans.modules.openide.util.ActionsBridge.doPerformAction(ActionsBridge.java:67) at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:142) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:357) at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1225) at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1266) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) WARNING [org.gephi.visualization.component.GraphTopComponent]: Cannot find GraphTopComponent component. It will not be located properly in the window system. WARNING [org.netbeans.core.startup.layers.BinaryFS]: value = org.gephi.visualization.component.GraphTopComponent.findInstance from Actions/Window/org-gephi-visualization-component-GraphAction.instance java.lang.NullPointerException at org.gephi.visualization.component.VizBarController$LabelGroupBar.getToolbarComponents(VizBarController.java:418) at org.gephi.visualization.component.VizToolbar.(VizToolbar.java:43) at org.gephi.visualization.component.VizBarController.getToolbar(VizBarController.java:90) at org.gephi.visualization.component.GraphTopComponent.initCollapsePanel(GraphTopComponent.java:91) at org.gephi.visualization.component.GraphTopComponent.(GraphTopComponent.java:65) at org.gephi.visualization.component.GraphTopComponent.getDefault(GraphTopComponent.java:210) at org.gephi.visualization.component.GraphTopComponent.findInstance(GraphTopComponent.java:223) Caused: java.lang.reflect.InvocationTargetException at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method) at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39) at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25) at java.lang.reflect.Method.invoke(Method.java:597) at org.netbeans.core.startup.layers.BinaryFS$AttrImpl$MethodAndParams.invoke(BinaryFS.java:603) at org.netbeans.core.startup.layers.BinaryFS$AttrImpl.getValue(BinaryFS.java:536) at org.netbeans.core.startup.layers.BinaryFS$BFSBase.getAttribute(BinaryFS.java:382) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:844) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:793) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:840) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:793) at org.openide.filesystems.MultiFileObject.getAttribute(MultiFileObject.java:726) at org.netbeans.core.startup.layers.BinaryFS$FileMap.get(BinaryFS.java:959) at org.openide.windows.OpenComponentAction.getTopComponent(OpenComponentAction.java:70) at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:76) at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:139) at org.netbeans.modules.openide.util.ActionsBridge.implPerformAction(ActionsBridge.java:83) at org.netbeans.modules.openide.util.ActionsBridge.doPerformAction(ActionsBridge.java:67) at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:142) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:357) at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1225) at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1266) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122) SEVERE [global] java.lang.NullPointerException at org.openide.windows.OpenComponentAction.actionPerformed(OpenComponentAction.java:77) at org.openide.awt.AlwaysEnabledAction$1.run(AlwaysEnabledAction.java:139) at org.netbeans.modules.openide.util.ActionsBridge.implPerformAction(ActionsBridge.java:83) at org.netbeans.modules.openide.util.ActionsBridge.doPerformAction(ActionsBridge.java:67) at org.openide.awt.AlwaysEnabledAction.actionPerformed(AlwaysEnabledAction.java:142) at javax.swing.AbstractButton.fireActionPerformed(AbstractButton.java:1995) at javax.swing.AbstractButton$Handler.actionPerformed(AbstractButton.java:2318) at javax.swing.DefaultButtonModel.fireActionPerformed(DefaultButtonModel.java:387) at javax.swing.DefaultButtonModel.setPressed(DefaultButtonModel.java:242) at javax.swing.AbstractButton.doClick(AbstractButton.java:357) at javax.swing.plaf.basic.BasicMenuItemUI.doClick(BasicMenuItemUI.java:1225) at javax.swing.plaf.basic.BasicMenuItemUI$Handler.mouseReleased(BasicMenuItemUI.java:1266) at java.awt.Component.processMouseEvent(Component.java:6263) at javax.swing.JComponent.processMouseEvent(JComponent.java:3267) at java.awt.Component.processEvent(Component.java:6028) at java.awt.Container.processEvent(Container.java:2041) at java.awt.Component.dispatchEventImpl(Component.java:4630) at java.awt.Container.dispatchEventImpl(Container.java:2099) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.LightweightDispatcher.retargetMouseEvent(Container.java:4574) at java.awt.LightweightDispatcher.processMouseEvent(Container.java:4238) at java.awt.LightweightDispatcher.dispatchEvent(Container.java:4168) at java.awt.Container.dispatchEventImpl(Container.java:2085) at java.awt.Window.dispatchEventImpl(Window.java:2475) at java.awt.Component.dispatchEvent(Component.java:4460) at java.awt.EventQueue.dispatchEvent(EventQueue.java:599) at org.netbeans.core.TimableEventQueue.dispatchEvent(TimableEventQueue.java:125) at java.awt.EventDispatchThread.pumpOneEventForFilters(EventDispatchThread.java:269) at java.awt.EventDispatchThread.pumpEventsForFilter(EventDispatchThread.java:184) at java.awt.EventDispatchThread.pumpEventsForHierarchy(EventDispatchThread.java:174) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:169) at java.awt.EventDispatchThread.pumpEvents(EventDispatchThread.java:161) [catch] at java.awt.EventDispatchThread.run(EventDispatchThread.java:122)