Running mysql standard test suite mtr against a standalone mysql with codership patches:

./mtr -mysqld=--wsrep_auto_increment_control=0,--auto_increment_offset=1,--auto_increment_increment=1 --reorder --report-features --comment="Trying reorder, report-features and mysqld parameters" --mem --suite innodb --debug-server --no-warnings --force --max-test-fail=100 | tee /home/egge/mtr-run-2014-08-07-b.txt

We find the following bugs:
innodb.innodb-autoinc
innodb.innodb_prefix_index_restart_server

Documented here:
innodb.innodb-autoinc
Test Fail Description:
--- /home/egge/aug/codership-mysql/mysql-test/suite/innodb/r/innodb-autoinc.result	2014-08-04 18:49:21.263878000 +0300
+++ /home/egge/aug/codership-mysql/mysql-test/var/log/innodb-autoinc.reject	2014-08-07 14:54:31.123659708 +0300
@@ -201,7 +201,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -235,7 +235,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -275,7 +275,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -289,7 +289,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (-2), (NULL),(2),(NULL);
 INSERT INTO t1 VALUES (250),(NULL);
 SELECT * FROM t1;
@@ -323,7 +323,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -339,7 +339,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (-2);
 Warnings:
 Warning	1264	Out of range value for column 'c1' at row 1
@@ -380,7 +380,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -396,7 +396,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (-2),(NULL),(2),(NULL);
 Warnings:
 Warning	1264	Out of range value for column 'c1' at row 1
@@ -431,7 +431,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -447,7 +447,7 @@
 Variable_name	Value
 auto_increment_increment	2
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL),(NULL),(NULL),(NULL),(NULL);
 SELECT * FROM t1;
 c1
@@ -466,7 +466,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -482,7 +482,7 @@
 Variable_name	Value
 auto_increment_increment	2
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL),(NULL),(NULL),(NULL),(NULL),(NULL);
 ERROR HY000: Failed to read auto-increment value from storage engine
 SELECT * FROM t1;
@@ -496,7 +496,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -512,7 +512,7 @@
 Variable_name	Value
 auto_increment_increment	5
 auto_increment_offset	7
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL), (NULL);
 ERROR HY000: Failed to read auto-increment value from storage engine
 SELECT * FROM t1;
@@ -526,7 +526,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -546,7 +546,7 @@
 Variable_name	Value
 auto_increment_increment	3
 auto_increment_offset	3
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL), (NULL);
 SELECT * FROM t1;
 c1
@@ -564,7 +564,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -583,7 +583,7 @@
 Variable_name	Value
 auto_increment_increment	65535
 auto_increment_offset	65535
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL);
 ERROR 22003: Out of range value for column 't1' at row 167
 SELECT * FROM t1;
@@ -597,7 +597,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 DOUBLE NOT NULL AUTO_INCREMENT, c2 INT, PRIMARY KEY (c1)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES(NULL, 1);
 INSERT INTO t1 VALUES(NULL, 2);
@@ -885,7 +885,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 TINYINT PRIMARY KEY AUTO_INCREMENT, c2 VARCHAR(10)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES (1, NULL);
 INSERT INTO t1 VALUES (-1, 'innodb');
@@ -1276,6 +1276,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	256
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 TINYINT PRIMARY KEY AUTO_INCREMENT, c2 VARCHAR(10)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES (1, NULL);
 SHOW CREATE TABLE t1;
@@ -1294,6 +1295,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 INT UNSIGNED PRIMARY KEY AUTO_INCREMENT, c2 VARCHAR(10)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES (2147483648, 'a');
 SHOW CREATE TABLE t1;

Analysis
wsrep_auto_increment_control=0,--auto_increment_offset=1,--auto_increment_increment=1 --reorder --report-features --comment="Trying reorder, report-features and mysqld parameters" --mem --suite innodb --debug-server --no-warnings --force --max-test-fail=100 | tee /home/egge/mtr-run-2014-08-07-b.txt

We find the following bugs:
innodb.innodb-autoinc
innodb.innodb_prefix_index_restart_server

Documented here:
innodb.innodb-autoinc
Test Fail Description:
--- /home/egge/aug/codership-mysql/mysql-test/suite/innodb/r/innodb-autoinc.result	2014-08-04 18:49:21.263878000 +0300
+++ /home/egge/aug/codership-mysql/mysql-test/var/log/innodb-autoinc.reject	2014-08-07 14:54:31.123659708 +0300
@@ -201,7 +201,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -235,7 +235,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -275,7 +275,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -289,7 +289,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (-2), (NULL),(2),(NULL);
 INSERT INTO t1 VALUES (250),(NULL);
 SELECT * FROM t1;
@@ -323,7 +323,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -339,7 +339,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (-2);
 Warnings:
 Warning	1264	Out of range value for column 'c1' at row 1
@@ -380,7 +380,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -396,7 +396,7 @@
 Variable_name	Value
 auto_increment_increment	100
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (-2),(NULL),(2),(NULL);
 Warnings:
 Warning	1264	Out of range value for column 'c1' at row 1
@@ -431,7 +431,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -447,7 +447,7 @@
 Variable_name	Value
 auto_increment_increment	2
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL),(NULL),(NULL),(NULL),(NULL);
 SELECT * FROM t1;
 c1
@@ -466,7 +466,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -482,7 +482,7 @@
 Variable_name	Value
 auto_increment_increment	2
 auto_increment_offset	10
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL),(NULL),(NULL),(NULL),(NULL),(NULL);
 ERROR HY000: Failed to read auto-increment value from storage engine
 SELECT * FROM t1;
@@ -496,7 +496,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -512,7 +512,7 @@
 Variable_name	Value
 auto_increment_increment	5
 auto_increment_offset	7
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL), (NULL);
 ERROR HY000: Failed to read auto-increment value from storage engine
 SELECT * FROM t1;
@@ -526,7 +526,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -546,7 +546,7 @@
 Variable_name	Value
 auto_increment_increment	3
 auto_increment_offset	3
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL), (NULL);
 SELECT * FROM t1;
 c1
@@ -564,7 +564,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 DROP TABLE IF EXISTS t1;
 Warnings:
 Note	1051	Unknown table 'test.t1'
@@ -583,7 +583,7 @@
 Variable_name	Value
 auto_increment_increment	65535
 auto_increment_offset	65535
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 INSERT INTO t1 VALUES (NULL),(NULL);
 ERROR 22003: Out of range value for column 't1' at row 167
 SELECT * FROM t1;
@@ -597,7 +597,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 DOUBLE NOT NULL AUTO_INCREMENT, c2 INT, PRIMARY KEY (c1)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES(NULL, 1);
 INSERT INTO t1 VALUES(NULL, 2);
@@ -885,7 +885,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
-wsrep_auto_increment_control	ON
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 TINYINT PRIMARY KEY AUTO_INCREMENT, c2 VARCHAR(10)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES (1, NULL);
 INSERT INTO t1 VALUES (-1, 'innodb');
@@ -1276,6 +1276,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	256
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 TINYINT PRIMARY KEY AUTO_INCREMENT, c2 VARCHAR(10)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES (1, NULL);
 SHOW CREATE TABLE t1;
@@ -1294,6 +1295,7 @@
 Variable_name	Value
 auto_increment_increment	1
 auto_increment_offset	1
+wsrep_auto_increment_control	OFF
 CREATE TABLE t1 (c1 INT UNSIGNED PRIMARY KEY AUTO_INCREMENT, c2 VARCHAR(10)) ENGINE=InnoDB;
 INSERT INTO t1 VALUES (2147483648, 'a');
 SHOW CREATE TABLE t1;

Analysis
   Setting wsrep_auto_increment_control=0 seems to fail, and yet it is
   expected to set to zero.