Automatic fix does not work for "file is not listed in the book manifest."
1) Open attached test-case.epub in ebook-edit
2) Choose "Check book"
3) The error are printed: "OEBPS/
This file is not listed in the book manifest. While not strictly necessary it is good practice to list all files in the manifest. Either list this file in the manifest or remove it from the book if it is an unnecessary file."
4) Click below link: "Try to correct all fixable errors automatically"
Proper entry to book manifest should be added by ebook-edit
Ebook-edit does nothing.