opal_wrapper crashed with SIGSEGV in __libc_calloc()

Bug #932628 reported by James Page
12
This bug affects 1 person
Affects Status Importance Assigned to Milestone
openmpi (Debian)
Fix Released
Unknown
openmpi (Ubuntu)
Fix Released
High
Unassigned

Bug Description

fakeroot mpic++ from debian experimental

This is for pre-transition testing....

ProblemType: Crash
DistroRelease: Ubuntu 12.04
Package: libopenmpi-dev 1.5.4-2~exp1
ProcVersionSignature: Ubuntu 3.2.0-15.24-generic 3.2.5
Uname: Linux 3.2.0-15-generic x86_64
NonfreeKernelModules: fglrx
ApportVersion: 1.91-0ubuntu1
Architecture: amd64
CrashCounter: 1
Date: Wed Feb 15 10:05:17 2012
ExecutablePath: /usr/bin/opal_wrapper
ProcCmdline: mpic++
SegvAnalysis:
 Segfault happened at: 0x7f26d4461086 <calloc+150>: mov 0x8(%r13),%r12
 PC (0x7f26d4461086) ok
 source "0x8(%r13)" (0x00000008) not located in a known VMA region (needed readable region)!
 destination "%r12" ok
SegvReason: reading NULL VMA
Signal: 11
SourcePackage: openmpi
StacktraceTop:
 calloc () from /lib/x86_64-linux-gnu/libc.so.6
 ?? () from /lib/x86_64-linux-gnu/libdl.so.2
 dlsym () from /lib/x86_64-linux-gnu/libdl.so.2
 load_library_symbols () from /usr/lib/x86_64-linux-gnu/libfakeroot/libfakeroot-sysv.so
 tmp___xstat () from /usr/lib/x86_64-linux-gnu/libfakeroot/libfakeroot-sysv.so
Title: opal_wrapper crashed with SIGSEGV in calloc()
UpgradeStatus: No upgrade log present (probably fresh install)
UserGroups: adm cdrom dip libvirtd lpadmin plugdev sambashare sbuild sudo

Revision history for this message
James Page (james-page) wrote :
visibility: private → public
Revision history for this message
Apport retracing service (apport) wrote :

StacktraceTop:
 __libc_calloc (n=<optimized out>, elem_size=<optimized out>) at malloc.c:3260
 _dlerror_run (operate=0x7f26d41dc030 <dlsym_doit>, args=0x7fff6a8da6a0) at dlerror.c:142
 __dlsym (handle=<optimized out>, name=<optimized out>) at dlsym.c:71
 ?? ()
 ?? ()

Revision history for this message
Apport retracing service (apport) wrote : Stacktrace.txt
Revision history for this message
Apport retracing service (apport) wrote : ThreadStacktrace.txt
Changed in openmpi (Ubuntu):
importance: Undecided → Medium
summary: - opal_wrapper crashed with SIGSEGV in calloc()
+ opal_wrapper crashed with SIGSEGV in __libc_calloc()
tags: removed: need-amd64-retrace
Revision history for this message
James Page (james-page) wrote :
Revision history for this message
James Page (james-page) wrote :

Related to this upstream issue - https://svn.open-mpi.org/trac/ompi/changeset/21493
and this Debian bug - http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=531522

1.5.x introduces a new check BEFORE the check for FAKEROOT build environment which regresses this fix from 1.3.x.

Changed in openmpi (Ubuntu):
importance: Medium → High
status: New → In Progress
Changed in openmpi (Debian):
status: Unknown → New
Changed in openmpi (Debian):
status: New → Fix Released
James Page (james-page)
Changed in openmpi (Ubuntu):
status: In Progress → Fix Released
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