TIFF files -> SemWeb.ParserException: rdf:RDF cannot be used as a property name.

[jimav]

Binary package hint: beagle

Suspicious exceptions are being written to .beagle/Log/*IndexHelperExceptions, possibly related to indexing TIFF files,
and also a NullReferenceException.

These occurred after I ran the following to clean out all old state:
   beagle-shutdown
   removed every subdirectory under $HOME/.beagle except for config/
   export BEAGLE_EXERCISE_THE_DOG=1 ; beagled

Here are the first exceptions in the IndexHelperExceptiosn file. I'll also attach the Log files.
Note: The file EmergencyAcctAndComputerInfo.ods is an encrypted OpenOffice document, which
probably explains the WARN mentioning that file.

20091019 13:12:30.2399 02825 IndexH ERROR EX: Error loading TIFF file
20091019 13:12:30.2399 02825 IndexH ERROR EX: SemWeb.ParserException: rdf:RDF cannot be used as a property name.
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.RdfXmlReader.OnError (System.String message) [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.RdfXmlReader.ParseProperty (SemWeb.Entity subject, System.Int32& liIndex) [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.RdfXmlReader.ParsePropertyNodes (SemWeb.Entity subject) [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.RdfXmlReader.ParseDescription () [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.RdfXmlReader.Select (StatementSink storage) [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.MemoryStore+StoreImpl.Import (StatementSource source) [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at SemWeb.Store.Import (StatementSource source) [0x00000]
20091019 13:12:30.2399 02825 IndexH ERROR EX: at FSpot.Xmp.XmpFile.Load (System.IO.Stream stream) [0x00000]
20091019 13:12:30.3749 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:31.7035 02825 IndexH WARN EX: Unable to filter /home/jima/Documents/EmergencyAcctAndComputerInfo.ods:
20091019 13:12:31.7035 02825 IndexH WARN EX: System.Text.DecoderFallbackException: Exception of type 'System.Text.DecoderFallbackException' was thrown.
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Text.DecoderExceptionFallbackBuffer.Fallback (System.Byte[] bytesUnknown, Int32 index) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Text.UTF8Encoding.Fallback (System.Object provider, System.Text.DecoderFallbackBuffer& buffer, System.Byte[]& bufferArg, System.Byte* bytes, Int64 byteIndex, UInt32 size, System.Char* chars, System.Int32& charIndex) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Text.UTF8Encoding.InternalGetChars (System.Byte* bytes, Int32 byteCount, System.Char* chars, Int32 charCount, System.UInt32& leftOverBits, System.UInt32& leftOverCount, System.Object provider, System.Text.DecoderFallbackBuffer& fallbackBuffer, System.Byte[]& bufferArg, Boolean flush) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Text.UTF8Encoding.InternalGetChars (System.Byte[] bytes, Int32 byteIndex, Int32 byteCount, System.Char[] chars, Int32 charIndex, System.UInt32& leftOverBits, System.UInt32& leftOverCount, System.Object provider, System.Text.DecoderFallbackBuffer& fallbackBuffer, System.Byte[]& bufferArg, Boolean flush) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Text.UTF8Encoding+UTF8Decoder.GetChars (System.Byte[] bytes, Int32 byteIndex, Int32 byteCount, System.Char[] chars, Int32 charIndex) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Xml.NonBlockingStreamReader.ReadBuffer () [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Xml.NonBlockingStreamReader.Read (System.Char[] dest_buffer, Int32 index, Int32 count) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Mono.Xml2.XmlTextReader.ReadTextReader (Int32 remained) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Mono.Xml2.XmlTextReader.PeekChar () [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Mono.Xml2.XmlTextReader.ReadContent () [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Mono.Xml2.XmlTextReader.Read () [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at System.Xml.XmlTextReader.Read () [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Beagle.Filters.FilterOpenOffice.ExtractMetadata (System.Xml.XmlReader reader) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Beagle.Filters.FilterOpenOffice.DoPullProperties () [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Beagle.Daemon.Filter.Open (System.IO.Stream stream, Boolean store_tempfile) [0x00000]
20091019 13:12:31.7035 02825 IndexH WARN EX: at Beagle.Daemon.Filter.Open (System.IO.FileSystemInfo info) [0x00000]
20091019 13:12:31.7735 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:38.0441 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:49.9039 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:50.4864 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:50.8384 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:52.5755 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:52.8477 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:52.9714 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:53.2149 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:12:57.1126 02825 IndexH DEBUG EX: Caught exception while pulling text in filter 'FilterTexi'
20091019 13:12:57.1126 02825 IndexH DEBUG EX: System.NullReferenceException: Object reference not set to an instance of an object
20091019 13:12:57.1126 02825 IndexH DEBUG EX: at Beagle.Filters.FilterTexi.DoPull () [0x00000]
20091019 13:12:57.1126 02825 IndexH DEBUG EX: at Beagle.Daemon.Filter.Pull () [0x00000]
20091019 13:12:57.1126 02825 IndexH DEBUG EX: at Beagle.Daemon.Filter.PullFromArray (System.Collections.ArrayList array, System.Text.StringBuilder sb, Boolean is_hot) [0x00000]
20091019 13:12:57.1126 02825 IndexH DEBUG EX: at Beagle.Daemon.Filter.PullTextCarefully (System.Collections.ArrayList array, System.Text.StringBuilder sb, Int32 chars_to_pull, Boolean is_hot) [0x00000]
20091019 13:13:32.0332 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file
20091019 13:13:35.9783 02825 IndexH ERROR EX: (Repeated) Error loading TIFF file

ProblemType: Bug
Architecture: amd64
Date: Mon Oct 19 13:19:12 2009
DistroRelease: Ubuntu 9.10
ExecutablePath: /usr/lib/beagle/BeagleDaemon.exe
InterpreterPath: /usr/bin/mono
Package: beagle 0.3.9-3ubuntu1
ProcEnviron:
 SHELL=/bin/bash
 PATH=(custom, user)
 LANG=en_US.UTF-8
ProcVersionSignature: Ubuntu 2.6.31-12.41-generic
SourcePackage: beagle
Uname: Linux 2.6.31-12-generic x86_64
XsessionErrors:
 (gnome-settings-daemon:1942): GLib-CRITICAL **: g_propagate_error: assertion `src != NULL' failed
 (gnome-settings-daemon:1942): GLib-CRITICAL **: g_propagate_error: assertion `src != NULL' failed
 (polkit-gnome-authentication-agent-1:2015): GLib-CRITICAL **: g_once_init_leave: assertion `initialization_value != 0' failed
 (nautilus:1977): Eel-CRITICAL **: eel_preferences_get_boolean: assertion `preferences_is_initialized ()' failed

[jimav (james-avera)]

Attaching the IndexHelper Log file

[Jeremy Bícha (jbicha)]

Thank you for taking the time to report this bug. We are sorry that we do not always have the capacity to look at all reported bugs in a timely manner.

Beagle, the search software, is no longer included in Ubuntu. Unrelated genetic analysis software named beagle has now been uploaded to Ubuntu's archives for the next version of Ubuntu. Therefore, to avoid confusion, I am closing this bug.