libgdal.so.1 raises error "undefined symbol: sqlite3_column_table_name"

[Sebastián Magrí]

Running a GeoDjango app on Dokku raises an error with the attached traceback aparently from libgdal due to a missing symbol from sqlite3 (sqlite3_column_table_name).

However, checking out the symbols from libsqlite3 and libgdal show the symbol reported as missing:

root@61a8740990c8:/# objdump -TR /usr/lib/x86_64-linux-gnu/libsqlite3.so.0 | grep column_table_name
0000000000010890 g DF .text 0000000000000011 Base sqlite3_column_table_name
00000000000108b0 g DF .text 0000000000000011 Base sqlite3_column_table_name16
root@61a8740990c8:/# objdump -TR /usr/lib/libgdal.so.1.17.1 | grep column_table_name
0000000000000000 D *UND* 0000000000000000 sqlite3_column_table_name
0000000000c783e0 R_X86_64_JUMP_SLOT sqlite3_column_table_name

[Andreas Moog (ampelbein)]

Hi,

I can't reproduce this, can you provide more detailed instructions on how you ran into this bug?

[Sebastián Magrí (sebasmagri)]

Hi! After digging into this issue I've found that the source of the issue is that the buildpack used by dokku for python apps is bundling an old version sqlite3 and patching the LD_LIBRARY_PATH.

I'm closing this.

Best Regards,