Percona Server moved to https://jira.percona.com/projects/PS

Failing assertion: mutex_own(&(log_sys->mutex)) in file log0log.cc line 224 | abort in log_check_tracking_margin

Bug #1184435 reported by Roel Van de Paar on 2013-05-26

This bug affects 1 person

	Status	Importance	Assigned to	Milestone
Percona Server moved to https://jira.percona.com/projects/PS	Fix Released	Critical	Laurynas Biveinis	Percona Server moved to https://jira.percona.com/projects/PS 5.6.11-60.3
5.1	Invalid	Undecided	Unassigned
5.5	Invalid	Undecided	Unassigned
5.6	Fix Released	Critical	Laurynas Biveinis	Percona Server moved to https://jira.percona.com/projects/PS 5.6.11-60.3

Bug Description

2013-05-26 17:43:32 18e7f700 InnoDB: Assertion failure in thread 417855232 in file log0log.cc line 224
InnoDB: Failing assertion: mutex_own(&(log_sys->mutex))

Query (20ca81a0): INSERT /*! IGNORE */ INTO table100_innodb_dynamic VALUES ('2000-03-24', 'vpnigwiymxonsrfqzbzeeofuxqiynfgvxvkedxpprlifglddajtyqowctqbrhwpttrnklteqywbuckdbnvlgnnzenqekloznzxldkzvtrfftwvngcoullsephyewzwhflyiqyllzvvtibomnpzzjmqniehuouhqyoogyjuwoyifabeejbkeyxnafkyeseuormrjfkrsqqjcivmtmcyhpmehphlfpbryfhjhlnmsurdzqwrxtywlixkbpjtgcvzdbeahnwuyynhfvneytgxotqjebedpjqpvidevdiymqfzeyvdyqkycmufsxhujynonuuyngzxrotuiaqhsjgrsxtohduvhoeiyxzbiwtmsmjvverjokgxmbrhmsautllwbukfsbeppbmahtxlgdrhvkdjdnvglnmjpbypjkqnazmkgzyofedjwybmootogjojuefcxgsznmfmvyojfxsicilhiiimszpat', LOAD_FILE('/ssd/randgen/data/earth215kb.jpg'), 'hey', LOAD_FILE('/ssd/randgen/data/earth81kb.jpg'), 'a', -573964288, 'pnigwiymxonsrfqzbzeeofuxqiynfgvxvkedxpprlifglddajtyqowctqbrhwpttrnklteqywbuckdbnvlgnnzenqekloznzxldkz', 'f', LOAD_FILE('/ssd/randgen/data/earth81kb.jpg'), 'and', 'not', 'do', 0, '2009-03-13', LOAD_FILE('/ssd/randgen/data/earth1886kb.jpg'), 'nigwiymxonsrfqzbzeeofuxqiynfgvxvkedxpprlifglddajtyqowctqbrhwpttrnklteqywbuckdbnvlgnnzenqekloznzxldkzvtrfftwvn[...]

(This is a fairly normal query in RQG, nothing special here)

Thread 1 (LWP 14432):
+bt
#0 0x0000003fde20c69c in pthread_kill () from /lib64/libpthread.so.0
#1 0x00000000006e47ad in handle_fatal_signal (sig=6) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/signal_handler.cc:251
#2 <signal handler called>
#3 0x0000003fdde328a5 in raise () from /lib64/libc.so.6
#4 0x0000003fdde34085 in abort () from /lib64/libc.so.6
#5 0x00000000009e00a0 in log_check_tracking_margin (lsn_advance=21338) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/log/log0log.cc:224
#6 0x00000000009e38fc in log_open (len=<optimized out>) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/log/log0log.cc:278
#7 0x00000000009f75df in mtr_log_reserve_and_write (mtr=0x18e7be00) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/mtr/mtr0mtr.cc:278
#8 0x00000000009f7837 in mtr_commit (mtr=0x18e7be00) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/mtr/mtr0mtr.cc:323
#9 0x0000000000adf426 in btr_store_big_rec_extern_fields (index=0x193f94e8, rec_block=<optimized out>, rec=0x9bde051 "j", offsets=0x8abcd88, big_rec_vec=0x24b19618, btr_mtr=0x18e7c410, op=BTR_STORE_INSERT) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/btr/btr0cur.cc:4973
#10 0x0000000000a3ffb9 in row_ins_index_entry_big_rec_func (entry=0x9bde051, big_rec=0x24b19618, offsets=0x8abcd88, heap=0x18e7cf58, index=0x193f94e8, file=0xdc8b20 "/ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc", thd=0x18cb6bb0, line=2529) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc:2840
#11 0x0000000000a42ddb in row_ins_clust_index_entry_low (flags=0, mode=417845080, index=0x193f94e8, n_uniq=<optimized out>, entry=0x214de488, n_ext=0, thr=0x20f7a240) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc:2529
#12 0x0000000000a45ca9 in row_ins_clust_index_entry (index=0x193f94e8, entry=0x214de488, thr=0x20f7a240, n_ext=0) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc:2908
#13 0x0000000000a45d74 in row_ins_index_entry_step (node=0x20f795f8, thr=0x20f7a240) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc:3058
#14 0x0000000000a45e4b in row_ins (node=0x20f795f8, thr=0x20f7a240) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc:3198
#15 0x0000000000a460cb in row_ins_step (thr=0x20f7a240) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0ins.cc:3323
#16 0x0000000000a5d154 in row_insert_for_mysql (mysql_rec=<optimized out>, prebuilt=<optimized out>) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/row/row0mysql.cc:1312
#17 0x00000000009a1b88 in ha_innobase::write_row (this=0x20f2ff70, record=0x199a59e0 " \f") at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/innobase/handler/ha_innodb.cc:6895
#18 0x0000000000637ca8 in handler::ha_write_row (this=0x20f2ff70, buf=0x199a59e0 " \f") at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/handler.cc:7424
#19 0x000000000074eb69 in write_record (thd=0x18cb6bb0, table=0x199a50b0, info=0x18e7d510, update=0x18e7d490) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_insert.cc:1905
#20 0x0000000000753637 in mysql_insert (thd=0x18cb6bb0, table_list=0x18b46f28, fields=..., values_list=..., update_fields=..., update_values=..., duplic=DUP_ERROR, ignore=true) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_insert.cc:1054
#21 0x000000000076a87e in mysql_execute_command (thd=0x18cb6bb0) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_parse.cc:3626
#22 0x000000000076d110 in mysql_parse (thd=0x18cb6bb0, rawbuf=<optimized out>, length=<optimized out>, parser_state=<optimized out>) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_parse.cc:6443
#23 0x000000000076dbaf in dispatch_command (command=<optimized out>, thd=0x18cb6bb0, packet=<optimized out>, packet_length=550668008) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_parse.cc:1359
#24 0x000000000076e800 in do_command (thd=0x18cb6bb0) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_parse.cc:1051
#25 0x000000000073910f in do_handle_one_connection (thd_arg=<optimized out>) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_connect.cc:1617
#26 0x0000000000739220 in handle_one_connection (arg=0x18cb6bb0) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/sql/sql_connect.cc:1528
#27 0x0000000000c0b949 in pfs_spawn_thread (arg=0x18b46b60) at /ssd/5.6-merge-3_val/Percona-Server-5.6.10-alpha60.2/storage/perfschema/pfs.cc:1853
#28 0x0000003fde207851 in start_thread () from /lib64/libpthread.so.0
#29 0x0000003fddee890d in clone () from /lib64/libc.so.6

Valgrinds seen in log before assert (first same as bug #1184427 and second similar as bug #1184427 but not the same)

2013-05-26 17:42:32 14404 [Note] InnoDB: Highest supported file format is Barracuda.
==14404== Conditional jump or move depends on uninitialised value(s)
==14404== at 0x9E70F7: log_online_start_bitmap_file() (log0online.cc:526)
==14404== by 0x9E92CF: log_online_read_init() (log0online.cc:725)
==14404== by 0xA94A3C: init_log_online() (srv0start.cc:1456)
==14404== by 0xA97D81: innobase_start_or_create_for_mysql() (srv0start.cc:2327)
==14404== by 0x9A2E19: innobase_init(void*) (ha_innodb.cc:3492)
==14404== by 0x63CA4A: ha_initialize_handlerton(st_plugin_int*) (handler.cc:690)
==14404== by 0x77503F: plugin_initialize(st_plugin_int*) (sql_plugin.cc:1126)
==14404== by 0x7771A9: plugin_init(int*, char**, int) (sql_plugin.cc:1417)
==14404== by 0x624981: init_server_components() (mysqld.cc:4872)
==14404== by 0x6293CF: mysqld_main(int, char**) (mysqld.cc:5503)
==14404== by 0x3FDDE1ECDC: (below main) (in /lib64/libc-2.12.so)
==14404==
2013-05-26 17:42:33 14404 [Note] InnoDB: starting tracking changed pages from LSN 1625977

and

2013-05-26 17:42:41 14404 [Note] /ssd/Percona-Server-5.6.10-alpha60.2-347-debug-valgrind.Linux.x86_64/bin/mysqld-debug: ready for connections.
Version: '5.6.11-alpha60.2-debug-log' socket: '/ssd/271485/current1_5/tmp/master.sock' port: 13080 Percona Server with XtraDB (GPL), Release alpha60.2, Revision 347-debug-valgrind
==14404== Thread 12:
==14404== Conditional jump or move depends on uninitialised value(s)
==14404== at 0x9E70F7: log_online_start_bitmap_file() (log0online.cc:526)
==14404== by 0x9E8831: log_online_write_bitmap() (log0online.cc:1131)
==14404== by 0x9E8AA2: log_online_follow_redo_log() (log0online.cc:1223)
==14404== by 0xA8FC94: srv_redo_log_follow_thread (srv0srv.cc:2177)
==14404== by 0x3FDE207850: start_thread (in /lib64/libpthread-2.12.so)
==14404== by 0x3FDDEE890C: clone (in /lib64/libc-2.12.so)
==14404==

Tags:

Related branches

lp:~laurynas-biveinis/percona-server/5.6-merge-4

Merged into lp:percona-server/5.6 at revision 366

Stewart Smith (community): Approve on 2013-05-31

Diff: 28652 lines (+8737/-18610)

172 files modified

COPYING.innodb-deadlock-count-patch (+0/-30)
COPYING.show_temp_51 (+13/-0)
Makefile (+2/-2)
Percona-Server/client/mysqldump.c (+121/-21)
Percona-Server/include/errmsg.h (+1/-0)
Percona-Server/libmysql/errmsg.c (+1/-0)
Percona-Server/mysql-test/include/have_pool_of_threads.inc (+0/-4)
Percona-Server/mysql-test/include/log_grep.inc (+0/-41)
Percona-Server/mysql-test/include/percona_query_cache_with_comments.inc (+95/-0)
Percona-Server/mysql-test/include/percona_query_cache_with_comments_begin.inc (+0/-12)
Percona-Server/mysql-test/include/percona_query_cache_with_comments_clear.inc (+5/-0)
Percona-Server/mysql-test/include/percona_query_cache_with_comments_eval.inc (+7/-0)
Percona-Server/mysql-test/include/percona_show_slave_status_nolock.inc (+0/-56)
Percona-Server/mysql-test/r/have_pool_of_threads.require (+2/-0)
Percona-Server/mysql-test/r/percona_bug1170103.result (+19/-0)
Percona-Server/mysql-test/r/percona_bug933969.result (+0/-16)
Percona-Server/mysql-test/r/percona_innodb_deadlock_count.result (+28/-0)
Percona-Server/mysql-test/r/percona_log_slow_admin_statements-config.result (+0/-6)
Percona-Server/mysql-test/r/percona_log_slow_admin_statements-config_foo.result (+7/-0)
Percona-Server/mysql-test/r/percona_log_slow_admin_statements-config_true.result (+0/-6)
Percona-Server/mysql-test/r/percona_log_slow_filter-cl.result (+0/-6)
Percona-Server/mysql-test/r/percona_min_examined_row_limit.result (+0/-35)
Percona-Server/mysql-test/r/percona_mysqldump_innodb_optimize_keys.result (+47/-0)
Percona-Server/mysql-test/r/percona_query_cache_with_comments_crash.result (+21/-0)
Percona-Server/mysql-test/r/percona_query_cache_with_comments_prepared_statements.result (+0/-396)
Percona-Server/mysql-test/r/percona_status_wait_query_cache_mutex.result (+20/-0)
Percona-Server/mysql-test/r/pool_of_threads.result (+2169/-0)
Percona-Server/mysql-test/r/pool_of_threads_high_prio_tickets.result (+2169/-0)
Percona-Server/mysql-test/suite/binlog/r/percona_bug1162085.result (+6/-0)
Percona-Server/mysql-test/suite/binlog/t/percona_bug1162085.test (+30/-0)
Percona-Server/mysql-test/suite/innodb/r/percona_changed_page_bmp.result (+8/-3)
Percona-Server/mysql-test/suite/innodb/t/percona_changed_page_bmp-master.opt (+1/-1)
Percona-Server/mysql-test/suite/innodb/t/percona_changed_page_bmp.test (+16/-3)
Percona-Server/mysql-test/suite/rpl/r/percona_bug860910.result (+0/-23)
Percona-Server/mysql-test/suite/rpl/t/percona_bug860910.test (+0/-38)
Percona-Server/mysql-test/suite/sys_vars/r/extra_max_connections_basic.result (+43/-0)
Percona-Server/mysql-test/suite/sys_vars/r/extra_port_basic.result (+21/-0)
Percona-Server/mysql-test/suite/sys_vars/r/query_exec_id_basic.result (+2/-0)
Percona-Server/mysql-test/suite/sys_vars/r/thread_pool_high_prio_tickets_basic.result (+47/-0)
Percona-Server/mysql-test/suite/sys_vars/r/thread_pool_idle_timeout_basic.result (+47/-0)
Percona-Server/mysql-test/suite/sys_vars/r/thread_pool_max_threads_basic.result (+47/-0)
Percona-Server/mysql-test/suite/sys_vars/r/thread_pool_min_threads_basic.result (+49/-0)
Percona-Server/mysql-test/suite/sys_vars/r/thread_pool_oversubscribe_basic.result (+47/-0)
Percona-Server/mysql-test/suite/sys_vars/r/thread_pool_stall_limit_basic.result (+47/-0)
Percona-Server/mysql-test/suite/sys_vars/t/extra_max_connections_basic.test (+0/-42)
Percona-Server/mysql-test/suite/sys_vars/t/query_exec_id_basic.test (+0/-4)
Percona-Server/mysql-test/suite/sys_vars/t/thread_pool_high_prio_tickets_basic.test (+43/-0)
Percona-Server/mysql-test/suite/sys_vars/t/thread_pool_idle_timeout_basic.test (+0/-43)
Percona-Server/mysql-test/suite/sys_vars/t/thread_pool_min_threads_basic.test (+0/-43)
Percona-Server/mysql-test/suite/sys_vars/t/thread_pool_oversubscribe_basic.test (+0/-43)
Percona-Server/mysql-test/suite/sys_vars/t/thread_pool_size_basic.test (+47/-0)
Percona-Server/mysql-test/suite/sys_vars/t/thread_pool_stall_limit_basic.test (+0/-43)
Percona-Server/mysql-test/t/percona_bug1170103-master.opt (+1/-0)
Percona-Server/mysql-test/t/percona_bug1170103.test (+23/-0)
Percona-Server/mysql-test/t/percona_bug933969.test (+0/-42)
Percona-Server/mysql-test/t/percona_log_slow_admin_statements-config_false.test (+2/-0)
Percona-Server/mysql-test/t/percona_log_slow_admin_statements-config_foo.test (+3/-0)
Percona-Server/mysql-test/t/percona_log_slow_admin_statements-config_true.cnf (+4/-0)
Percona-Server/mysql-test/t/percona_log_slow_slave_statements-cl-master.opt (+0/-1)
Percona-Server/mysql-test/t/percona_log_slow_sp_statements-cl-master.opt (+0/-1)
Percona-Server/mysql-test/t/percona_log_slow_sp_statements-cl.test (+2/-0)
Percona-Server/mysql-test/t/percona_log_slow_verbosity-cl-master.opt (+0/-1)
Percona-Server/mysql-test/t/percona_log_slow_verbosity-cl.test (+0/-2)
Percona-Server/mysql-test/t/percona_mysqldump_innodb_optimize_keys.test (+27/-0)
Percona-Server/mysql-test/t/percona_query_cache_with_comments_prepared_statements.test (+0/-208)
Percona-Server/mysql-test/t/percona_status_wait_query_cache_mutex.test (+0/-35)
Percona-Server/mysql-test/t/percona_xtradb_bug317074.test (+47/-0)
Percona-Server/mysql-test/t/pool_of_threads.cnf (+15/-0)
Percona-Server/mysql-test/t/pool_of_threads_high_prio_tickets.cnf (+16/-0)
Percona-Server/mysql-test/t/pool_of_threads_high_prio_tickets.test (+19/-0)
Percona-Server/mysys/mf_cache.c (+5/-3)
Percona-Server/sql/query_strip_comments.h (+37/-0)
Percona-Server/sql/sys_vars.cc (+7/-0)
Percona-Server/sql/threadpool.h (+72/-0)
Percona-Server/sql/threadpool_common.cc (+367/-0)
Percona-Server/sql/threadpool_unix.cc (+1699/-0)
Percona-Server/sql/threadpool_win.cc (+763/-0)
Percona-Server/storage/innobase/handler/ha_innodb.cc (+4/-0)
Percona-Server/storage/innobase/include/srv0srv.h (+5/-0)
Percona-Server/storage/innobase/log/log0log.cc (+7/-1)
Percona-Server/storage/innobase/read/read0read.cc (+9/-0)
Percona-Server/storage/innobase/row/row0sel.cc (+3/-3)
Percona-Server/storage/innobase/srv/srv0srv.cc (+32/-0)
Percona-Server/storage/innobase/trx/trx0sys.cc (+2/-0)
Percona-Server/storage/innobase/trx/trx0trx.cc (+1/-0)
UDF/configure.ac (+1/-0)
build/build-binary.sh (+1/-0)
build/debian/additions/debian-start (+0/-32)
build/debian/additions/debian-start.inc.sh (+0/-72)
build/debian/compat (+0/-1)
build/debian/rules (+3/-1)
build/percona-server.spec (+15/-10)
build/percona-shared-compat.spec (+1/-1)
build/rpm/mysql-dubious-exports.patch (+0/-127)
doc/source/conf.py (+1/-1)
doc/source/development.rst (+0/-266)
doc/source/diagnostics/user_stats.rst (+0/-242)
doc/source/flexibility/buff_read_ahead_area.rst (+36/-0)
doc/source/management/innodb_expanded_fast_index_creation.rst (+0/-82)
doc/source/management/innodb_fake_changes.rst (+70/-0)
doc/source/management/innodb_kill_idle_trx.rst (+0/-2)
doc/source/percona_xtradb.rst (+13/-0)
doc/source/performance/query_cache_enhance.rst (+123/-0)
doc/source/performance/threadpool.rst (+33/-0)
doc/source/reliability/error_pad.rst (+0/-55)
doc/source/reliability/innodb_corrupt_table_action.rst (+0/-35)
doc/source/upstream-bug-fixes.rst (+40/-16)
python-for-subunit2junitxml/BytesIO.py (+0/-136)
python-for-subunit2junitxml/iso8601/LICENSE (+0/-20)
python-for-subunit2junitxml/iso8601/README (+0/-26)
python-for-subunit2junitxml/iso8601/README.subunit (+0/-5)
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