Yade is unusable on Ubuntu 12.10
Crashes all the time.
yade --test
...
...
Bodies: erased bodies are None in python ... ok
testErasedAndNewlyCreatedSphere (yade.TestBodies)
Bodies: The bug is described in LP:1001194. If the new body was created after deletion of previous, it has no bounding box ... ok
testErasedIterate (yade.TestBodies)
Bodies: Iterator silently skips erased ones ... SIGSEGV/SIGABRT handler called; gdb batch file is `/tmp/yade-dYcDeB/tmp-0'
GNU gdb (GDB) 7.5-ubuntu
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[New LWP 13815]
[New LWP 13814]
[Thread debugging using libthread_db enabled]
Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1".
0x00007fcbaa8b4b5d in waitpid () from /lib/x86_64-linux-gnu/libc.so.6
No symbol "info" in current context.
Thread 3 (Thread 0x7fcb88bd5700 (LWP 13814)):
#0 0x00007fcbaa8e2703 in select () from /lib/x86_64-linux-gnu/libc.so.6
#1 0x00007fcb897a7e4c in ?? () from /usr/lib/libtcl8.5.so.0
#2 0x00007fcbab4d5e9a in start_thread () from /lib/x86_64-linux-gnu/libpthread.so.0
#3 0x00007fcbaa8e939d in clone () from /lib/x86_64-linux-gnu/libc.so.6
#4 0x0000000000000000 in ?? ()
Thread 2 (Thread 0x7fcb868c8700 (LWP 13815)):
#0 0x00007fcba7456fb6 in ?? () from /usr/lib/x86_64-linux-gnu/libgomp.so.1
#1 0x00007fcba745582e in ?? () from /usr/lib/x86_64-linux-gnu/libgomp.so.1
#2 0x00007fcbab4d5e9a in start_thread () from /lib/x86_64-linux-gnu/libpthread.so.0
#3 0x00007fcbaa8e939d in clone () from /lib/x86_64-linux-gnu/libc.so.6
#4 0x0000000000000000 in ?? ()
Thread 1 (Thread 0x7fcbab8fa700 (LWP 13813)):
#0 0x00007fcbaa8b4b5d in waitpid () from /lib/x86_64-linux-gnu/libc.so.6
#1 0x00007fcbaa83af1e in ?? () from /lib/x86_64-linux-gnu/libc.so.6
#2 0x00007fcbaa83b330 in system () from /lib/x86_64-linux-gnu/libc.so.6
#3 0x00007fcbab7aab33 in crashHandler (sig=11) at /home/dem/trunk/core/main/pyboot.cpp:21
#4 <signal handler called>
#5 0x000000000048a5a8 in ?? ()
#6 0x00007fcba8eda5c9 in boost::python::converter::shared_ptr_deleter::operator()(void const*) () from /usr/lib/libboost_python-py27.so.1.49.0
#7 0x00007fcba9b69781 in boost::detail::sp_counted_impl_pd<void*, boost::python::converter::shared_ptr_deleter>::dispose (this=0x2dedd60) at /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:148
#8 0x00007fcbab7ab8b2 in boost::detail::sp_counted_base::release (this=0x2dedd60) at /usr/include/boost/smart_ptr/detail/sp_counted_base_gcc_x86.hpp:145
#9 0x00007fcbab7ab941 in boost::detail::shared_count::~shared_count (this=0x31a6bb8, __in_chrg=<optimized out>) at /usr/include/boost/smart_ptr/detail/shared_count.hpp:305
#10 0x00007fcba9b2911c in boost::shared_ptr<Body>::~shared_ptr (this=0x31a6bb0, __in_chrg=<optimized out>) at /usr/include/boost/smart_ptr/shared_ptr.hpp:164
#11 0x00007fcba9c21103 in std::_Destroy<boost::shared_ptr<Body> > (__pointer=0x31a6bb0) at /usr/include/c++/4.7/bits/stl_construct.h:95
#12 0x00007fcba9c1e435 in std::_Destroy_aux<false>::__destroy<boost::shared_ptr<Body>*> (__first=0x31a6bb0, __last=0x31a6be0) at /usr/include/c++/4.7/bits/stl_construct.h:105
#13 0x00007fcba9c19c54 in std::_Destroy<boost::shared_ptr<Body>*> (__first=0x31a6bb0, __last=0x31a6be0) at /usr/include/c++/4.7/bits/stl_construct.h:128
#14 0x00007fcba9c13f71 in std::_Destroy<boost::shared_ptr<Body>*, boost::shared_ptr<Body> > (__first=0x31a6bb0, __last=0x31a6be0) at /usr/include/c++/4.7/bits/stl_construct.h:155
#15 0x00007fcba9c18a6a in std::vector<boost::shared_ptr<Body>, std::allocator<boost::shared_ptr<Body> > >::~vector (this=0x29b8098, __in_chrg=<optimized out>) at /usr/include/c++/4.7/bits/stl_vector.h:403
#16 0x00007fcba9d6bfb9 in BodyContainer::~BodyContainer (this=0x29b8090, __in_chrg=<optimized out>) at /home/dem/trunk/core/BodyContainer.cpp:18
#17 0x00007fcba9d6c018 in BodyContainer::~BodyContainer (this=0x29b8090, __in_chrg=<optimized out>) at /home/dem/trunk/core/BodyContainer.cpp:18
#18 0x00007fcba9bbae56 in boost::checked_delete<BodyContainer> (x=0x29b8090) at /usr/include/boost/checked_delete.hpp:34
#19 0x00007fcba9bec248 in boost::detail::sp_counted_impl_p<BodyContainer>::dispose (this=0x31e3cd0) at /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:78
#20 0x00007fcbab7ab8b2 in boost::detail::sp_counted_base::release (this=0x31e3cd0) at /usr/include/boost/smart_ptr/detail/sp_counted_base_gcc_x86.hpp:145
#21 0x00007fcbab7ab941 in boost::detail::shared_count::~shared_count (this=0x31e3c30, __in_chrg=<optimized out>) at /usr/include/boost/smart_ptr/detail/shared_count.hpp:305
#22 0x00007fcba9b94d84 in boost::shared_ptr<BodyContainer>::~shared_ptr (this=0x31e3c28, __in_chrg=<optimized out>) at /usr/include/boost/smart_ptr/shared_ptr.hpp:164
#23 0x00007fcba9bc0ad3 in Scene::~Scene (this=0x31e39f0, __in_chrg=<optimized out>) at /home/dem/build/yade/core/Scene.hpp:33
#24 0x00007fcba9bc0ca4 in Scene::~Scene (this=0x31e39f0, __in_chrg=<optimized out>) at /home/dem/build/yade/core/Scene.hpp:33
#25 0x00007fcba9bc0cdc in boost::checked_delete<Scene> (x=0x31e39f0) at /usr/include/boost/checked_delete.hpp:34
#26 0x00007fcba9beb9de in boost::detail::sp_counted_impl_p<Scene>::dispose (this=0x31a2e70) at /usr/include/boost/smart_ptr/detail/sp_counted_impl.hpp:78
#27 0x00007fcbab7ab8b2 in boost::detail::sp_counted_base::release (this=0x31a2e70) at /usr/include/boost/smart_ptr/detail/sp_counted_base_gcc_x86.hpp:145
#28 0x00007fcbab7ab941 in boost::detail::shared_count::~shared_count (this=0x7fff89b17328, __in_chrg=<optimized out>) at /usr/include/boost/smart_ptr/detail/shared_count.hpp:305
#29 0x00007fcbab7ac3a4 in boost::shared_ptr<Scene>::~shared_ptr (this=0x7fff89b17320, __in_chrg=<optimized out>) at /usr/include/boost/smart_ptr/shared_ptr.hpp:164
#30 0x00007fcba9bb5d19 in boost::shared_ptr<Scene>::operator= (this=0x14d6e40, r=...) at /usr/include/boost/smart_ptr/shared_ptr.hpp:311
#31 0x00007fcba9c00652 in Omega::resetAllScenes (this=0x1494ae0) at /home/dem/trunk/core/Omega.cpp:57
#32 0x00007fcba9c00c3e in Omega::init (this=0x1494ae0) at /home/dem/trunk/core/Omega.cpp:103
#33 0x00007fcba9c00c08 in Omega::reset (this=0x1494ae0) at /home/dem/trunk/core/Omega.cpp:97
#34 0x00007fcb90ee90c0 in pyOmega::reset (this=0x7fcbab765f70) at /home/dem/trunk/py/wrapper/yadeWrapper.cpp:403
#35 0x00007fcb91003c02 in boost::python::detail::invoke<int, void (pyOmega::*)(), boost::python::arg_from_python<pyOmega&> > (f=@0x1559318: (void (pyOmega::*)(pyOmega * const)) 0x7fcb90ee909c <pyOmega::reset()>, tc=...) at /usr/include/boost/python/detail/invoke.hpp:94
#36 0x00007fcb90fe0755 in boost::python::detail::caller_arity<1u>::impl<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> >::operator() (this=0x1559318, args_=0x2fa6790) at /usr/include/boost/python/detail/caller.hpp:223
#37 0x00007fcb90fc2deb in boost::python::objects::caller_py_function_impl<boost::python::detail::caller<void (pyOmega::*)(), boost::python::default_call_policies, boost::mpl::vector2<void, pyOmega&> > >::operator() (this=0x1559310, args=0x2fa6790, kw=0x0) at /usr/include/boost/python/object/py_function.hpp:38
#38 0x00007fcba8ecfd3b in boost::python::objects::function::call(_object*, _object*) const () from /usr/lib/libboost_python-py27.so.1.49.0
#39 0x00007fcba8ecff58 in ?? () from /usr/lib/libboost_python-py27.so.1.49.0
#40 0x00007fcba8ed8f8b in boost::python::handle_exception_impl(boost::function0<void>) () from /usr/lib/libboost_python-py27.so.1.49.0
#41 0x00007fcba8ece205 in ?? () from /usr/lib/libboost_python-py27.so.1.49.0
#42 0x00000000004600ae in PyEval_EvalFrameEx ()
#43 0x00000000004602a7 in PyEval_EvalFrameEx ()
#44 0x00000000004671d9 in PyEval_EvalCodeEx ()
#45 0x00000000004aa068 in ?? ()
#46 0x000000000046187e in PyEval_EvalFrameEx ()
#47 0x00000000004671d9 in PyEval_EvalCodeEx ()
#48 0x00000000004a9f3a in ?? ()
#49 0x000000000048227d in ?? ()
#50 0x00000000004a08d6 in PyObject_Call ()
#51 0x00000000004f0e94 in ?? ()
#52 0x00000000004600ae in PyEval_EvalFrameEx ()
#53 0x00000000004671d9 in PyEval_EvalCodeEx ()
#54 0x00000000004aa068 in ?? ()
#55 0x000000000046187e in PyEval_EvalFrameEx ()
#56 0x00000000004671d9 in PyEval_EvalCodeEx ()
#57 0x00000000004a9f3a in ?? ()
#58 0x000000000048227d in ?? ()
#59 0x00000000004a08d6 in PyObject_Call ()
#60 0x00000000004f0e94 in ?? ()
#61 0x00000000004600ae in PyEval_EvalFrameEx ()
#62 0x00000000004671d9 in PyEval_EvalCodeEx ()
#63 0x00000000004aa068 in ?? ()
#64 0x000000000046187e in PyEval_EvalFrameEx ()
#65 0x00000000004671d9 in PyEval_EvalCodeEx ()
#66 0x00000000004a9f3a in ?? ()
#67 0x000000000048227d in ?? ()
#68 0x00000000004a08d6 in PyObject_Call ()
#69 0x00000000004f0e94 in ?? ()
#70 0x00000000004600ae in PyEval_EvalFrameEx ()
#71 0x00000000004671d9 in PyEval_EvalCodeEx ()
#72 0x00000000004aa068 in ?? ()
#73 0x000000000046187e in PyEval_EvalFrameEx ()
#74 0x00000000004671d9 in PyEval_EvalCodeEx ()
#75 0x00000000004a9f3a in ?? ()
#76 0x000000000048227d in ?? ()
#77 0x00000000004a08d6 in PyObject_Call ()
#78 0x00000000004f0e94 in ?? ()
#79 0x00000000004600ae in PyEval_EvalFrameEx ()
#80 0x00000000004602a7 in PyEval_EvalFrameEx ()
#81 0x00000000004602a7 in PyEval_EvalFrameEx ()
#82 0x00000000004671d9 in PyEval_EvalCodeEx ()
#83 0x00000000004d0162 in PyEval_EvalCode ()
#84 0x00000000005103bb in ?? ()
#85 0x000000000044a456 in PyRun_FileExFlags ()
#86 0x000000000044a96a in PyRun_SimpleFileExFlags ()
#87 0x000000000044b6ac in Py_Main ()
#88 0x00007fcbaa81876d in __libc_start_main () from /lib/x86_64-linux-gnu/libc.so.6
#89 0x00000000004cdfcd in _start ()
Segmentation fault (core dumped)
It seems, it happens during removing of the old "smart" scene-pointer [1].
Crashes somewhere in libthreads.
The problem occurs only on Ubuntu Quantal.
Still not sure why... On other systems the bug does not appear.
Suggestions are welcome.
Thanks.
Anton
[1] https:/